Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

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The map label for this gene is ahpC [H]

Identifier: 120610062

GI number: 120610062

Start: 1506774

End: 1507349

Strand: Direct

Name: ahpC [H]

Synonym: Aave_1375

Alternate gene names: 120610062

Gene position: 1506774-1507349 (Clockwise)

Preceding gene: 120610060

Following gene: 120610063

Centisome position: 28.15

GC content: 61.98

Gene sequence:

>576_bases
ATGTCCCTGATCAATACCCAAGTCCAGCCTTTTAAGACCGAAGCGTTCGTGAACCGCAATGGCAAGGGTGAGTTCATTAC
CGTCACGGAAGAGAACCTGAAGGGCAAGTGGTCCGTGCTGATCTTCATGCCGGCCGCCTTCACGTTCAACTGCCCGACCG
AGATCGAAGACGCCGCCGACAACTACGCCGAGTTCCAGAAGGCCGGTGCCGAGGTGTACATCGTGACCACCGACACGCAC
TTCTCGCACAAGGTGTGGCACGAGACCTCCGACGCCGTCGGCAAGGCCAAGTTCCCCCTGGTCGGCGACCCGACCCACCA
GCTGACCAACGCCTTCGGCGTGCACATCCCCGAAGAAGGCCTGGCACTGCGCGGCACCTTCGTGATCAACCCCGACGGCG
TCATCAAGACGATGGAAATCCACTCCAACGAGATCGCCCGCGACGTGTCGGAAACCCTGCGCAAGCTCAAGGCCGCCCAG
TTCACCGCCGCCAACCCCGGCCAGGTGTGCCCCGCCAAGTGGAAGGAAGGCGCCAAGACCCTGACGCCTTCGCTGGACCT
GGTCGGCAAGATCTAA

Upstream 100 bases:

>100_bases
AATGCAATCGATTGGATGGAATCAATTAATTGGATTGATTGGGTGAGCGCCCCTAAACTTCGTCTTGTCATTCAGCAACC
CACCAACCGAGGAAACAGCA

Downstream 100 bases:

>100_bases
TCGCCCGCGCGATCCGGAAGCGCCCTGTGCGCTTCCCCGGCCGGACCTTCGCATGGCGCCCGCGCGCCGTGCCGTCCGGC
TTTTTTTCGCCCGCTTTTCG

Product: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen

Products: NA

Alternate protein names: Alkyl hydroperoxide reductase protein C22; Peroxiredoxin; SCRP-23; Sulfate starvation-induced protein 8; SSI8; Thioredoxin peroxidase [H]

Number of amino acids: Translated: 191; Mature: 190

Protein sequence:

>191_residues
MSLINTQVQPFKTEAFVNRNGKGEFITVTEENLKGKWSVLIFMPAAFTFNCPTEIEDAADNYAEFQKAGAEVYIVTTDTH
FSHKVWHETSDAVGKAKFPLVGDPTHQLTNAFGVHIPEEGLALRGTFVINPDGVIKTMEIHSNEIARDVSETLRKLKAAQ
FTAANPGQVCPAKWKEGAKTLTPSLDLVGKI

Sequences:

>Translated_191_residues
MSLINTQVQPFKTEAFVNRNGKGEFITVTEENLKGKWSVLIFMPAAFTFNCPTEIEDAADNYAEFQKAGAEVYIVTTDTH
FSHKVWHETSDAVGKAKFPLVGDPTHQLTNAFGVHIPEEGLALRGTFVINPDGVIKTMEIHSNEIARDVSETLRKLKAAQ
FTAANPGQVCPAKWKEGAKTLTPSLDLVGKI
>Mature_190_residues
SLINTQVQPFKTEAFVNRNGKGEFITVTEENLKGKWSVLIFMPAAFTFNCPTEIEDAADNYAEFQKAGAEVYIVTTDTHF
SHKVWHETSDAVGKAKFPLVGDPTHQLTNAFGVHIPEEGLALRGTFVINPDGVIKTMEIHSNEIARDVSETLRKLKAAQF
TAANPGQVCPAKWKEGAKTLTPSLDLVGKI

Specific function: Directly reduces organic hydroperoxides in its reduced dithiol form [H]

COG id: COG0450

COG function: function code O; Peroxiredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

Organism=Homo sapiens, GI32483377, Length=183, Percent_Identity=40.9836065573771, Blast_Score=139, Evalue=1e-33,
Organism=Homo sapiens, GI5802974, Length=183, Percent_Identity=42.0765027322404, Blast_Score=138, Evalue=3e-33,
Organism=Homo sapiens, GI32189392, Length=179, Percent_Identity=38.5474860335196, Blast_Score=129, Evalue=2e-30,
Organism=Homo sapiens, GI4505591, Length=166, Percent_Identity=37.3493975903614, Blast_Score=128, Evalue=2e-30,
Organism=Homo sapiens, GI32455266, Length=166, Percent_Identity=37.3493975903614, Blast_Score=128, Evalue=2e-30,
Organism=Homo sapiens, GI32455264, Length=166, Percent_Identity=37.3493975903614, Blast_Score=128, Evalue=2e-30,
Organism=Homo sapiens, GI5453549, Length=172, Percent_Identity=37.2093023255814, Blast_Score=128, Evalue=3e-30,
Organism=Escherichia coli, GI1786822, Length=191, Percent_Identity=56.5445026178011, Blast_Score=237, Evalue=4e-64,
Organism=Caenorhabditis elegans, GI17554494, Length=181, Percent_Identity=39.7790055248619, Blast_Score=138, Evalue=2e-33,
Organism=Caenorhabditis elegans, GI32565831, Length=178, Percent_Identity=38.2022471910112, Blast_Score=129, Evalue=9e-31,
Organism=Caenorhabditis elegans, GI193204376, Length=178, Percent_Identity=38.2022471910112, Blast_Score=129, Evalue=9e-31,
Organism=Saccharomyces cerevisiae, GI6320661, Length=185, Percent_Identity=38.3783783783784, Blast_Score=134, Evalue=1e-32,
Organism=Saccharomyces cerevisiae, GI6323613, Length=186, Percent_Identity=38.7096774193548, Blast_Score=130, Evalue=1e-31,
Organism=Saccharomyces cerevisiae, GI6319407, Length=164, Percent_Identity=28.0487804878049, Blast_Score=65, Evalue=8e-12,
Organism=Drosophila melanogaster, GI24656348, Length=186, Percent_Identity=37.6344086021505, Blast_Score=136, Evalue=1e-32,
Organism=Drosophila melanogaster, GI17864676, Length=186, Percent_Identity=37.6344086021505, Blast_Score=136, Evalue=1e-32,
Organism=Drosophila melanogaster, GI17738015, Length=167, Percent_Identity=38.3233532934132, Blast_Score=128, Evalue=3e-30,
Organism=Drosophila melanogaster, GI21357347, Length=186, Percent_Identity=35.4838709677419, Blast_Score=126, Evalue=9e-30,
Organism=Drosophila melanogaster, GI17157991, Length=162, Percent_Identity=37.037037037037, Blast_Score=115, Evalue=2e-26,
Organism=Drosophila melanogaster, GI24641739, Length=162, Percent_Identity=37.037037037037, Blast_Score=115, Evalue=2e-26,
Organism=Drosophila melanogaster, GI24581278, Length=158, Percent_Identity=29.746835443038, Blast_Score=73, Evalue=1e-13,
Organism=Drosophila melanogaster, GI17975518, Length=156, Percent_Identity=29.4871794871795, Blast_Score=71, Evalue=5e-13,
Organism=Drosophila melanogaster, GI24652434, Length=156, Percent_Identity=29.4871794871795, Blast_Score=70, Evalue=8e-13,
Organism=Drosophila melanogaster, GI24652436, Length=156, Percent_Identity=29.4871794871795, Blast_Score=70, Evalue=8e-13,

Paralogues:

None

Copy number: 300 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2250 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 6040 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1580 Molecules/Cell In: Stationary-Phase

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000866
- InterPro:   IPR017559
- InterPro:   IPR019479
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF10417 1-cysPrx_C; PF00578 AhpC-TSA [H]

EC number: =1.11.1.15 [H]

Molecular weight: Translated: 20989; Mature: 20858

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLINTQVQPFKTEAFVNRNGKGEFITVTEENLKGKWSVLIFMPAAFTFNCPTEIEDAAD
CCCCCCCCCCEEEEEEECCCCCCCEEEEECCCCCCEEEEEEEECCEEEECCCCCHHHHHH
NYAEFQKAGAEVYIVTTDTHFSHKVWHETSDAVGKAKFPLVGDPTHQLTNAFGVHIPEEG
HHHHHHHCCCEEEEEEECCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCEECCCC
LALRGTFVINPDGVIKTMEIHSNEIARDVSETLRKLKAAQFTAANPGQVCPAKWKEGAKT
EEEEEEEEECCCCEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCC
LTPSLDLVGKI
CCCCCCEEECC
>Mature Secondary Structure 
SLINTQVQPFKTEAFVNRNGKGEFITVTEENLKGKWSVLIFMPAAFTFNCPTEIEDAAD
CCCCCCCCCEEEEEEECCCCCCCEEEEECCCCCCEEEEEEEECCEEEECCCCCHHHHHH
NYAEFQKAGAEVYIVTTDTHFSHKVWHETSDAVGKAKFPLVGDPTHQLTNAFGVHIPEEG
HHHHHHHCCCEEEEEEECCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCEECCCC
LALRGTFVINPDGVIKTMEIHSNEIARDVSETLRKLKAAQFTAANPGQVCPAKWKEGAKT
EEEEEEEEECCCCEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCC
LTPSLDLVGKI
CCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]