Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
---|---|
Accession | NC_008752 |
Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is bfr [H]
Identifier: 120610061
GI number: 120610061
Start: 1506042
End: 1506518
Strand: Reverse
Name: bfr [H]
Synonym: Aave_1374
Alternate gene names: 120610061
Gene position: 1506518-1506042 (Counterclockwise)
Preceding gene: 120610066
Following gene: 120610059
Centisome position: 28.14
GC content: 62.68
Gene sequence:
>477_bases ATGCAAGGCGACGCTCAGGTCATTTCCCACCTGCAGGCCCAGCTCAAGAACGAGCTGACGGCCATCAACCAGTACTTTCT GCACTACCGGATGCTCAAGCACTGGGGCTTCGACCGTCTGGCGAAGAAGGAGTACGAAGAGTCCATCGGCGAGATGAAGC ACGCCGACCGCATCATGGACCGCATTTTCATGCTGGACGGACTGCCCAACCTGCAGGACCTGGGCAAGCTGCAGGTCGGC GAGGACGTGCCGGAGATCCTCGAATGCGACCTGCGCTCCGAGCGTGGCGCGCAGGCCACCATCAAGGAAGGCATCGCCCA CTGCGAGGCGGTGCGCGACTACGTCTCGCGCGACCTGCTGCAGGAAATCCTCGAGGACACCGAGGAGCACATCGACTTCC TGGAGACGCAGCTGGGCCTAGTGGAGCAGGTGGGCGTGCAGAACTACCTGCAGTCGCAGATGGGCGAGGCGGACTGA
Upstream 100 bases:
>100_bases CAGGCAGACCGGGTGCGTGGGGGCTTCGCCTTGCCGTGGCGGGCGGGCATCACGACAATCGCGCCGACACCGCACCATTC CATTATTACGAGGAGAGTCC
Downstream 100 bases:
>100_bases CCTCGCCCAAAGTGGTTACCTCCTTCCTGGCGATACCAACTGCGTGACGAACCGGACGTCGCCGTCTTCCACGACGGCGC CGAAGGTTCCGTTCCGGCTG
Product: bacterioferritin
Products: NA
Alternate protein names: BFR; Cytochrome b-557.5 [H]
Number of amino acids: Translated: 158; Mature: 158
Protein sequence:
>158_residues MQGDAQVISHLQAQLKNELTAINQYFLHYRMLKHWGFDRLAKKEYEESIGEMKHADRIMDRIFMLDGLPNLQDLGKLQVG EDVPEILECDLRSERGAQATIKEGIAHCEAVRDYVSRDLLQEILEDTEEHIDFLETQLGLVEQVGVQNYLQSQMGEAD
Sequences:
>Translated_158_residues MQGDAQVISHLQAQLKNELTAINQYFLHYRMLKHWGFDRLAKKEYEESIGEMKHADRIMDRIFMLDGLPNLQDLGKLQVG EDVPEILECDLRSERGAQATIKEGIAHCEAVRDYVSRDLLQEILEDTEEHIDFLETQLGLVEQVGVQNYLQSQMGEAD >Mature_158_residues MQGDAQVISHLQAQLKNELTAINQYFLHYRMLKHWGFDRLAKKEYEESIGEMKHADRIMDRIFMLDGLPNLQDLGKLQVG EDVPEILECDLRSERGAQATIKEGIAHCEAVRDYVSRDLLQEILEDTEEHIDFLETQLGLVEQVGVQNYLQSQMGEAD
Specific function: May perform analogous functions in iron detoxification and storage to that of animal ferritins [H]
COG id: COG2193
COG function: function code P; Bacterioferritin (cytochrome b1)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ferritin-like diiron domain [H]
Homologues:
Organism=Escherichia coli, GI1789733, Length=156, Percent_Identity=57.6923076923077, Blast_Score=186, Evalue=8e-49,
Paralogues:
None
Copy number: 1639 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002024 - InterPro: IPR009040 - InterPro: IPR012347 - InterPro: IPR009078 - InterPro: IPR008331 [H]
Pfam domain/function: PF00210 Ferritin [H]
EC number: NA
Molecular weight: Translated: 18203; Mature: 18203
Theoretical pI: Translated: 4.35; Mature: 4.35
Prosite motif: PS50905 FERRITIN_LIKE ; PS00549 BACTERIOFERRITIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQGDAQVISHLQAQLKNELTAINQYFLHYRMLKHWGFDRLAKKEYEESIGEMKHADRIMD CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH RIFMLDGLPNLQDLGKLQVGEDVPEILECDLRSERGAQATIKEGIAHCEAVRDYVSRDLL HHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH QEILEDTEEHIDFLETQLGLVEQVGVQNYLQSQMGEAD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MQGDAQVISHLQAQLKNELTAINQYFLHYRMLKHWGFDRLAKKEYEESIGEMKHADRIMD CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH RIFMLDGLPNLQDLGKLQVGEDVPEILECDLRSERGAQATIKEGIAHCEAVRDYVSRDLL HHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH QEILEDTEEHIDFLETQLGLVEQVGVQNYLQSQMGEAD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1549605; 1904771 [H]