Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120610056
Identifier: 120610056
GI number: 120610056
Start: 1501887
End: 1502243
Strand: Reverse
Name: 120610056
Synonym: Aave_1369
Alternate gene names: NA
Gene position: 1502243-1501887 (Counterclockwise)
Preceding gene: 120610057
Following gene: 120610055
Centisome position: 28.06
GC content: 77.31
Gene sequence:
>357_bases ATGCTCGAACTGCTGCTGTGTTTCGCCGGCTGGGCCGGCATCGCGCTGGGCATGGACCGGCACCACGAGGACGCCTGGGG GCGCGAAGGCGCCCCGGCGCGGCTGCGTGCCCTGCGCCGGGGCGGATGGGCCGTGCTGGGCCTGTCGCTGGTTCTGGCCG TGGCATGGCCGCGCATGGCCAGCGTGCCGCTGTCGGTCACCTGGTGGGCCGTGGCGCTGTCCGTGTCGGCGCTGGGCGCC ACTGCAGCGGCCACCTGGTGGCCGCGGCGCCTGCCCCGGCTCTGGGCCGCGGCCCTGGCGCTGGCAGTGCTGTGGGCGGC ACTGACGGCCGCCCTGGGGCCGCACGCCACGGGCTGA
Upstream 100 bases:
>100_bases TGCTGCGGCGCCGCGCGGCCGCCGCGCCGAAGGCGGCGCGCGCCGCCGCGCAGCCAAGGGCACCGTCCGGCACCACGCCC GCGCCAGGAGCCTGACCGCC
Downstream 100 bases:
>100_bases CCGGCCCCGGCCGCCACGGTCCGGCCGCAGTCCCCGCCTCGCCGCAAGACCCCGCTGCCGGGGGCGCCTCCGGCGCGCCG CCGCATTGTTTTTTCCATCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 118; Mature: 118
Protein sequence:
>118_residues MLELLLCFAGWAGIALGMDRHHEDAWGREGAPARLRALRRGGWAVLGLSLVLAVAWPRMASVPLSVTWWAVALSVSALGA TAAATWWPRRLPRLWAAALALAVLWAALTAALGPHATG
Sequences:
>Translated_118_residues MLELLLCFAGWAGIALGMDRHHEDAWGREGAPARLRALRRGGWAVLGLSLVLAVAWPRMASVPLSVTWWAVALSVSALGA TAAATWWPRRLPRLWAAALALAVLWAALTAALGPHATG >Mature_118_residues MLELLLCFAGWAGIALGMDRHHEDAWGREGAPARLRALRRGGWAVLGLSLVLAVAWPRMASVPLSVTWWAVALSVSALGA TAAATWWPRRLPRLWAAALALAVLWAALTAALGPHATG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12539; Mature: 12539
Theoretical pI: Translated: 12.13; Mature: 12.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLELLLCFAGWAGIALGMDRHHEDAWGREGAPARLRALRRGGWAVLGLSLVLAVAWPRMA CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHH SVPLSVTWWAVALSVSALGATAAATWWPRRLPRLWAAALALAVLWAALTAALGPHATG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MLELLLCFAGWAGIALGMDRHHEDAWGREGAPARLRALRRGGWAVLGLSLVLAVAWPRMA CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHH SVPLSVTWWAVALSVSALGATAAATWWPRRLPRLWAAALALAVLWAALTAALGPHATG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA