Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120610055
Identifier: 120610055
GI number: 120610055
Start: 1501029
End: 1501757
Strand: Reverse
Name: 120610055
Synonym: Aave_1368
Alternate gene names: NA
Gene position: 1501757-1501029 (Counterclockwise)
Preceding gene: 120610056
Following gene: 120610054
Centisome position: 28.06
GC content: 74.21
Gene sequence:
>729_bases ATGCCATCGTCCTTCCGCCCCTGGGCCACCGCCCTCTTCGCCGCCTGCGCCGCCTGCGCCGCCGCAGGTGCCCAGGCCCA CCAGGTGTGGCTCGAAGCCGGCAACGGCCAGGCACGGCTGCAGTTCGGCGAATATGCCGACAACCTGCTCGAGAAATCGC CGGGCGCGCTGGACAAGTTCCAGGGCATTCCGGTGCTGCAGGCCCATGCGCCGGGTGCGGCTTCGGCCACGCCCGTGGAA GGCCGGCGCACCGCCACGGCCTTCGCCTACGCATTGCCCGGCGCCGCCGAGACGCTGTTCGCGGAAGCCCCCTACCCGGT GATCGACCGCAGCAAGGGCGGCAAGCCCGCGCTGCTCTGGCGCCCCGCCGCGCGCTGGGTCGCGGACCTGTCCCGCCCCG TCGCGGCCACGGCGCCGCTGGACGTGGTGCCTACGGGCCGCGCGGGCGAACTGCGCGTGGTGTTCAACGGCCAGCCGCTG CCCAAGGCCCAGGTGACGCTGGCCGCGCCCTCCGGCTGGGCCCGCGAGGCCGTGACCGGAGCGGACGGCACGGTGCGGTT CGCCCTGCCGTGGAAAGGCCAGTACGTGGCCGAGGTGAAGCACTCCGATGCGGCGGCCGGCGAGCGCAATGGCGAGAAGT ACGGCGAGACGGCCTACCTCACCACGCTCACCTTCGCCCAGGCCGAGGGCATGGAATCTCCCGCCCTGCCGGCCGCCCCG GCGCGCTGA
Upstream 100 bases:
>100_bases GTCCCCGCCTCGCCGCAAGACCCCGCTGCCGGGGGCGCCTCCGGCGCGCCGCCGCATTGTTTTTTCCATCGACTCTTCCA CCTTTTCAAGGAGCCAACCG
Downstream 100 bases:
>100_bases CCTCCTGCCGCGCCGCGCGCCACGCCACCCGGCGCGCGCGGCCCCGTTTCCGCCATTCCTCCCGCACGCCGCCCCGGCGG CGCGGTCGATCCATTTCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 242; Mature: 241
Protein sequence:
>242_residues MPSSFRPWATALFAACAACAAAGAQAHQVWLEAGNGQARLQFGEYADNLLEKSPGALDKFQGIPVLQAHAPGAASATPVE GRRTATAFAYALPGAAETLFAEAPYPVIDRSKGGKPALLWRPAARWVADLSRPVAATAPLDVVPTGRAGELRVVFNGQPL PKAQVTLAAPSGWAREAVTGADGTVRFALPWKGQYVAEVKHSDAAAGERNGEKYGETAYLTTLTFAQAEGMESPALPAAP AR
Sequences:
>Translated_242_residues MPSSFRPWATALFAACAACAAAGAQAHQVWLEAGNGQARLQFGEYADNLLEKSPGALDKFQGIPVLQAHAPGAASATPVE GRRTATAFAYALPGAAETLFAEAPYPVIDRSKGGKPALLWRPAARWVADLSRPVAATAPLDVVPTGRAGELRVVFNGQPL PKAQVTLAAPSGWAREAVTGADGTVRFALPWKGQYVAEVKHSDAAAGERNGEKYGETAYLTTLTFAQAEGMESPALPAAP AR >Mature_241_residues PSSFRPWATALFAACAACAAAGAQAHQVWLEAGNGQARLQFGEYADNLLEKSPGALDKFQGIPVLQAHAPGAASATPVEG RRTATAFAYALPGAAETLFAEAPYPVIDRSKGGKPALLWRPAARWVADLSRPVAATAPLDVVPTGRAGELRVVFNGQPLP KAQVTLAAPSGWAREAVTGADGTVRFALPWKGQYVAEVKHSDAAAGERNGEKYGETAYLTTLTFAQAEGMESPALPAAPA R
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25191; Mature: 25059
Theoretical pI: Translated: 8.21; Mature: 8.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSSFRPWATALFAACAACAAAGAQAHQVWLEAGNGQARLQFGEYADNLLEKSPGALDKF CCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEHHHHHHHHHHCCCCCHHHH QGIPVLQAHAPGAASATPVEGRRTATAFAYALPGAAETLFAEAPYPVIDRSKGGKPALLW CCCCEEEECCCCCCCCCCCCCCCHHEEEEEECCCCHHHHCCCCCCCCEECCCCCCCEEEE RPAARWVADLSRPVAATAPLDVVPTGRAGELRVVFNGQPLPKAQVTLAAPSGWAREAVTG CHHHHHHHHHCCCCCCCCCCEEEECCCCCEEEEEECCCCCCCCEEEEECCCCCHHHHCCC ADGTVRFALPWKGQYVAEVKHSDAAAGERNGEKYGETAYLTTLTFAQAEGMESPALPAAP CCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEEEEHHHCCCCCCCCCCCC AR CC >Mature Secondary Structure PSSFRPWATALFAACAACAAAGAQAHQVWLEAGNGQARLQFGEYADNLLEKSPGALDKF CCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEHHHHHHHHHHCCCCCHHHH QGIPVLQAHAPGAASATPVEGRRTATAFAYALPGAAETLFAEAPYPVIDRSKGGKPALLW CCCCEEEECCCCCCCCCCCCCCCHHEEEEEECCCCHHHHCCCCCCCCEECCCCCCCEEEE RPAARWVADLSRPVAATAPLDVVPTGRAGELRVVFNGQPLPKAQVTLAAPSGWAREAVTG CHHHHHHHHHCCCCCCCCCCEEEECCCCCEEEEEECCCCCCCCEEEEECCCCCHHHHCCC ADGTVRFALPWKGQYVAEVKHSDAAAGERNGEKYGETAYLTTLTFAQAEGMESPALPAAP CCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEEEEHHHCCCCCCCCCCCC AR CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA