Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is mlhB [H]
Identifier: 120610048
GI number: 120610048
Start: 1488445
End: 1489290
Strand: Direct
Name: mlhB [H]
Synonym: Aave_1361
Alternate gene names: 120610048
Gene position: 1488445-1489290 (Clockwise)
Preceding gene: 120610045
Following gene: 120610049
Centisome position: 27.81
GC content: 74.59
Gene sequence:
>846_bases ATGCCTACCACCTCCGCTTCCCGCTCCACGCCCGCCGGCGCCCGCTCCGAGTCCACCATTGCGGTGGCGCCGGGGCAGGA CGTCGCCGTGCGCATGTACGGCCGCAGGAAAACCGGCGAGACGTCGCCGCTGGTCGTGCATTTCCATGGCGGCGCCTTCG TGTCCGGCGACCTGGACAGCGGCTGCACCATCGCCGGGCTGCTGCAGGAAGCCGGGGCGCTGGTGGTGTCGGTGGCCTAC CCGCTGGCCCCCGAGCATCCGTTCCCGCAGCCGCTGGAGACGGGCTATGCCGTGCTGCAGTGGGCCTACCGCTACCGCAC GCGGCTGGCCGGCACGGGCGCGCCGGTCTATGTGGCCGGGGAGGAGGCCGGCGGCAACCTGGCGGCGGGCGTGTGCCTCA TGGCGCGCGACCAGTCCCACCCGCCGCTGGCGGGGCAGATCCTCGTGTCGCCCATGCTCGACCCCTGCGTCGGCACGCCG TCGCTGCGGGCCGCCACCGAGGGCGCGGAGGCCTGCCGCTGGGCGCTGGGGTGGGAAAAGTTCCTGCGCTGCGCGCGCGA CGCGGAGCACCCGTATGCGGTGCCCGGCACCGCGCAGCGGCTGGCGGGCCTGCCGCCCACGCTGCTGCTGGTCGGCGACA CCGACCCCATGCACGACGAGACGCTGGCCTATGCGGCACGGCTGAAGGCCGCCGGCCTGCCGGTGGAACTGCACGTGCTG CGCAAGGCCGAGCGATGGCCCGATGCGCTGCTGGAGCCCGGCACACAGGCCTGTCCGTGCGCGGACGAGGCGCGCGAGCG GTTCCGGAGCTTCCTGGATGCCGGGCGATGTCCGGCACCGCGCTGA
Upstream 100 bases:
>100_bases GTTCGGACTTTGGAAACAGTGCGGCCCGCATCGGCTGGTTTATCGTCGCGGTCCGGCCCCCTACATTTGCAGCACCGGAT CGTTTCCGGCCACACCGCCC
Downstream 100 bases:
>100_bases AACCCCTCTTTCGAAGAACGCTCCTTCCGTCACCACGGAAGGTATTGACCTCAACAATGGTTGAGGTTTGAGAATCCGGC TCCGTTGCCGTATCCGTGCA
Product: alpha/beta hydrolase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 281; Mature: 280
Protein sequence:
>281_residues MPTTSASRSTPAGARSESTIAVAPGQDVAVRMYGRRKTGETSPLVVHFHGGAFVSGDLDSGCTIAGLLQEAGALVVSVAY PLAPEHPFPQPLETGYAVLQWAYRYRTRLAGTGAPVYVAGEEAGGNLAAGVCLMARDQSHPPLAGQILVSPMLDPCVGTP SLRAATEGAEACRWALGWEKFLRCARDAEHPYAVPGTAQRLAGLPPTLLLVGDTDPMHDETLAYAARLKAAGLPVELHVL RKAERWPDALLEPGTQACPCADEARERFRSFLDAGRCPAPR
Sequences:
>Translated_281_residues MPTTSASRSTPAGARSESTIAVAPGQDVAVRMYGRRKTGETSPLVVHFHGGAFVSGDLDSGCTIAGLLQEAGALVVSVAY PLAPEHPFPQPLETGYAVLQWAYRYRTRLAGTGAPVYVAGEEAGGNLAAGVCLMARDQSHPPLAGQILVSPMLDPCVGTP SLRAATEGAEACRWALGWEKFLRCARDAEHPYAVPGTAQRLAGLPPTLLLVGDTDPMHDETLAYAARLKAAGLPVELHVL RKAERWPDALLEPGTQACPCADEARERFRSFLDAGRCPAPR >Mature_280_residues PTTSASRSTPAGARSESTIAVAPGQDVAVRMYGRRKTGETSPLVVHFHGGAFVSGDLDSGCTIAGLLQEAGALVVSVAYP LAPEHPFPQPLETGYAVLQWAYRYRTRLAGTGAPVYVAGEEAGGNLAAGVCLMARDQSHPPLAGQILVSPMLDPCVGTPS LRAATEGAEACRWALGWEKFLRCARDAEHPYAVPGTAQRLAGLPPTLLLVGDTDPMHDETLAYAARLKAAGLPVELHVLR KAERWPDALLEPGTQACPCADEARERFRSFLDAGRCPAPR
Specific function: Lactone hydrolase that is required for the degradation of monocyclic monoterpenes such as menthol and carvone. Catalyzes the ring opening of lactones formed during degradation of monocyclic monoterpenes. Can hydrolyze epsilon-caprolactone, the lactone der
COG id: COG0657
COG function: function code I; Esterase/lipase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 'GDXG' lipolytic enzyme family [H]
Homologues:
Organism=Homo sapiens, GI21328446, Length=93, Percent_Identity=43.010752688172, Blast_Score=71, Evalue=9e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013094 [H]
Pfam domain/function: PF07859 Abhydrolase_3 [H]
EC number: =3.1.1.83 [H]
Molecular weight: Translated: 29718; Mature: 29587
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTTSASRSTPAGARSESTIAVAPGQDVAVRMYGRRKTGETSPLVVHFHGGAFVSGDLDS CCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCCCCEEEEECCCEEEECCCCC GCTIAGLLQEAGALVVSVAYPLAPEHPFPQPLETGYAVLQWAYRYRTRLAGTGAPVYVAG CCHHHHHHHHCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEC EEAGGNLAAGVCLMARDQSHPPLAGQILVSPMLDPCVGTPSLRAATEGAEACRWALGWEK CCCCCCHHHEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCHHH FLRCARDAEHPYAVPGTAQRLAGLPPTLLLVGDTDPMHDETLAYAARLKAAGLPVELHVL HHHHHHCCCCCCCCCCHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEHHHH RKAERWPDALLEPGTQACPCADEARERFRSFLDAGRCPAPR HHHHCCCHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure PTTSASRSTPAGARSESTIAVAPGQDVAVRMYGRRKTGETSPLVVHFHGGAFVSGDLDS CCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCCCCEEEEECCCEEEECCCCC GCTIAGLLQEAGALVVSVAYPLAPEHPFPQPLETGYAVLQWAYRYRTRLAGTGAPVYVAG CCHHHHHHHHCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEC EEAGGNLAAGVCLMARDQSHPPLAGQILVSPMLDPCVGTPSLRAATEGAEACRWALGWEK CCCCCCHHHEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCHHH FLRCARDAEHPYAVPGTAQRLAGLPPTLLLVGDTDPMHDETLAYAARLKAAGLPVELHVL HHHHHHCCCCCCCCCCHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEHHHH RKAERWPDALLEPGTQACPCADEARERFRSFLDAGRCPAPR HHHHCCCHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA