Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120610046
Identifier: 120610046
GI number: 120610046
Start: 1486995
End: 1487330
Strand: Reverse
Name: 120610046
Synonym: Aave_1359
Alternate gene names: NA
Gene position: 1487330-1486995 (Counterclockwise)
Preceding gene: 120610047
Following gene: 120610043
Centisome position: 27.79
GC content: 71.43
Gene sequence:
>336_bases ATGACCGCAGACTCCCCCGACCTCCCCGGCTCCCCCGGCCGCCCGTCCTCGCCTCCGGAGGCGAACCACGCGCCCGCCCC GTCCGCCCCACCCCAGCCCCGCAACCCGCTGCACGGCATCACGCTGGAGGCCATCGTGGTGGCCCTGCAGCAGGAATACG GCTGGAAGGGCCTGGCGGAGCGCGTTCCCGTGCGCTGTTTCCAGAGCGAGCCCAGCGTGTCGTCCAGCCTGAAATTCCTG CGCAAGACGCCCTGGGCGCGCGAGAAGGTGGAAAGCCTCTACCTCTTCATGCTGCGGGACCGCAGGCGTGGCCATCCGCC CGGGAAAGGCCGCTGA
Upstream 100 bases:
>100_bases GTGCGCGCCTTCGTGGACTGGGCCGCCGAACTGTTCGCGCGGGAGCGGTACCTGCAGGGCTGAACCCGCGATCGCAGGCC AGCCCGATATGCTCGGCGCC
Downstream 100 bases:
>100_bases ACCCTGGCAGCCTGGCGGCCAGGCCCCTGCCGAGCCCCGGGCGGCACGCCGCAGGCCTCAGGGCAATGTCAGGTACCGGA CCGCCGCCAGCAGCGTGATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 111; Mature: 110
Protein sequence:
>111_residues MTADSPDLPGSPGRPSSPPEANHAPAPSAPPQPRNPLHGITLEAIVVALQQEYGWKGLAERVPVRCFQSEPSVSSSLKFL RKTPWAREKVESLYLFMLRDRRRGHPPGKGR
Sequences:
>Translated_111_residues MTADSPDLPGSPGRPSSPPEANHAPAPSAPPQPRNPLHGITLEAIVVALQQEYGWKGLAERVPVRCFQSEPSVSSSLKFL RKTPWAREKVESLYLFMLRDRRRGHPPGKGR >Mature_110_residues TADSPDLPGSPGRPSSPPEANHAPAPSAPPQPRNPLHGITLEAIVVALQQEYGWKGLAERVPVRCFQSEPSVSSSLKFLR KTPWAREKVESLYLFMLRDRRRGHPPGKGR
Specific function: Unknown
COG id: COG4628
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12245; Mature: 12114
Theoretical pI: Translated: 10.71; Mature: 10.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTADSPDLPGSPGRPSSPPEANHAPAPSAPPQPRNPLHGITLEAIVVALQQEYGWKGLAE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHH RVPVRCFQSEPSVSSSLKFLRKTPWAREKVESLYLFMLRDRRRGHPPGKGR HCCHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure TADSPDLPGSPGRPSSPPEANHAPAPSAPPQPRNPLHGITLEAIVVALQQEYGWKGLAE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHH RVPVRCFQSEPSVSSSLKFLRKTPWAREKVESLYLFMLRDRRRGHPPGKGR HCCHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA