Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120610043
Identifier: 120610043
GI number: 120610043
Start: 1484285
End: 1484803
Strand: Reverse
Name: 120610043
Synonym: Aave_1356
Alternate gene names: NA
Gene position: 1484803-1484285 (Counterclockwise)
Preceding gene: 120610046
Following gene: 120610042
Centisome position: 27.74
GC content: 60.12
Gene sequence:
>519_bases GTGATTTTCCGCGCCGCGGAGAATGGGTTTCGACTCATCCCTCACCAGCAGGTAACGGAAATCGAAATGCATGTGGGCCG GCTCTCCCTTGGCGGGATTTTCGGGAATGGCATGGATGTCGATGTCCAGCGGGATTCCCGCCTTGAGATGCCATGGATGG GGAAAGGTGGCGATGCCCGTTTCTTCCTGGACTTCCCGGATGGCGGCATCGAGAGGCGCCTCGGAGGATTCGACATGGCC GCCGGGCTGGAGCCATCGCTTCAGGTAGGGATGGAACACGAGCAGCACGGTGTCGCGCGAGAGGACGATGCCGCTGGCGG TCACGTGGCCAGGCCATGTCCTGCGCCGGGTGATGTCCCCTCCCTTGTGCAATTGCTCCGTCAGCGGTACCAGCGCACCG GATTCCGACGGATATTCCCGGAGATATTCATCGACGATACACCCCAGATCCGAAGGCACGCCATGGCGCTCATCGTTTTC CAGCCTCTCGTTCATTGGCAGATCAGTTCCAGAATTTGA
Upstream 100 bases:
>100_bases GCTTTGGAATCCATGGCGGATCAGGCGGCCAGGCCGTGGCGGGCAATCTTCTGGCCAAACCTTCGCCGGACACCGCGGAA ATCTCCGTCCACTGGCATGG
Downstream 100 bases:
>100_bases GCAGCCCTGGAATCTAGCAGGCCGCGGCGCAGGGGCAGCCGATCGCCATTCATATTCCCGGTAAACAAAATTTATGAATA TGCCCTTTCGTGGCGGCAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 172; Mature: 172
Protein sequence:
>172_residues MIFRAAENGFRLIPHQQVTEIEMHVGRLSLGGIFGNGMDVDVQRDSRLEMPWMGKGGDARFFLDFPDGGIERRLGGFDMA AGLEPSLQVGMEHEQHGVAREDDAAGGHVARPCPAPGDVPSLVQLLRQRYQRTGFRRIFPEIFIDDTPQIRRHAMALIVF QPLVHWQISSRI
Sequences:
>Translated_172_residues MIFRAAENGFRLIPHQQVTEIEMHVGRLSLGGIFGNGMDVDVQRDSRLEMPWMGKGGDARFFLDFPDGGIERRLGGFDMA AGLEPSLQVGMEHEQHGVAREDDAAGGHVARPCPAPGDVPSLVQLLRQRYQRTGFRRIFPEIFIDDTPQIRRHAMALIVF QPLVHWQISSRI >Mature_172_residues MIFRAAENGFRLIPHQQVTEIEMHVGRLSLGGIFGNGMDVDVQRDSRLEMPWMGKGGDARFFLDFPDGGIERRLGGFDMA AGLEPSLQVGMEHEQHGVAREDDAAGGHVARPCPAPGDVPSLVQLLRQRYQRTGFRRIFPEIFIDDTPQIRRHAMALIVF QPLVHWQISSRI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19343; Mature: 19343
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFRAAENGFRLIPHQQVTEIEMHVGRLSLGGIFGNGMDVDVQRDSRLEMPWMGKGGDAR CEEECCCCCCEECCCCHHHHHHHHHCEEEECEEECCCEEEEECCCCCCCCCCCCCCCCEE FFLDFPDGGIERRLGGFDMAAGLEPSLQVGMEHEQHGVAREDDAAGGHVARPCPAPGDVP EEEECCCCCHHHHCCCCCCCCCCCCHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCHH SLVQLLRQRYQRTGFRRIFPEIFIDDTPQIRRHAMALIVFQPLVHWQISSRI HHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHEEECCCC >Mature Secondary Structure MIFRAAENGFRLIPHQQVTEIEMHVGRLSLGGIFGNGMDVDVQRDSRLEMPWMGKGGDAR CEEECCCCCCEECCCCHHHHHHHHHCEEEECEEECCCEEEEECCCCCCCCCCCCCCCCEE FFLDFPDGGIERRLGGFDMAAGLEPSLQVGMEHEQHGVAREDDAAGGHVARPCPAPGDVP EEEECCCCCHHHHCCCCCCCCCCCCHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCHH SLVQLLRQRYQRTGFRRIFPEIFIDDTPQIRRHAMALIVFQPLVHWQISSRI HHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA