Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
---|---|
Accession | NC_008752 |
Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is ahcY [H]
Identifier: 120610044
GI number: 120610044
Start: 1484890
End: 1486032
Strand: Direct
Name: ahcY [H]
Synonym: Aave_1357
Alternate gene names: 120610044
Gene position: 1484890-1486032 (Clockwise)
Preceding gene: 120610041
Following gene: 120610045
Centisome position: 27.74
GC content: 64.48
Gene sequence:
>1143_bases ATGGATTCCAAAGCATTCTTCCAGGCGGTTCTGGACAGCAGCGTTCCCAGGCGGGCGGGCAAGCTGGTCCTCGTGACCCA CATCGTTCCCGGGAGCGAGAATTTCGTCCTCGGCATCCACGAACGCCTGCCCCTGGCGGCGGTCATTCCCAAGCCCAGTT CCCTGCACGAGCCCACCTGCCGCGTGATCGAGGAGCATGTACCGGTGATCCACTACACGCGGGACAGGATCCAGCAGAAC GCGCTCGGCTTCATTGCGCACCTGCGCAGCCTGATCGGGGAGGAGCCTTTCGCGGCCATCGATACCGGGGGCTATTTCTC GAGCATCCTGGCCGCCCTGAAAAAGGCATTTCCCTCGCAACTGGTGGGCATCGTCGAGGACACCGAGAACGGACACCAGA AGTACGACGCCGCACTGCGCAGCATCCGGGCGGGCGGGGGCGCCATGTTTCCCTGTCCCGTCATGTCCGTGGCCAGGAGC AAGCTCAAGGAGCCGGAGGATTTCCTGGTCGGCCAGGCCATCACGTTTTCCGCCGAGGCCCTGCTGCGGGAACTGGGGAA CATCCTGACCGGCCGCAGGGCGCTGGTACTGGGCTACGGGAAGATCGGATCGAGCATTGCCCGGCACCTGCATGCCAAAG GCGTTCGCGTCGACGTGTACGACACGAACCCGATCCGCCAGGTGCTGGCCCTGGCGCACGGCTACCACACCGGGCCGAAG CACGAACTTTTGAGGACGGCGGAACTCATTTTCTGCGCGACCGGCAACCGGTCCATCGGAACGTCCGACCTGGGCGCCAT CCGGCGCGATGCCTACATCTTCACCGCCACGTCGGCCGACGACGAGATCGAGAACCACCAGGACATGATCGCCAGCGCGA GCCCCGGCGGGCACAGGCACGTGCTGCAGGTGAACGCGCAGGGCAACCAGTTCTTCCTCTGCAACGAGGGCAAGTCGGCC AATTTCATGCACGGAGGCGTGGTCGGGCCCTTCATCGACCTCGTGCAGGCCGAGCTGCTCTTCGCGCTCTCCAGGATCGG CGACGCCCCCCGGGACCGGGTGGTGGAACTGGGCGACGATGCGAAGAGATTCATTTCCGAGCTGTGGATCACGCGCTTTT CTCGACAGGGCATGGTCCATTGA
Upstream 100 bases:
>100_bases GCGCGGAAAATCACCCATGCCAGTGGACGGAGATTTCCGCGGTGTCCGGCGAAGGTTTGGCCAGAAGATTGCCCGCCACG GCCTGGCCGCCTGATCCGCC
Downstream 100 bases:
>100_bases ACAACTTTTCCGCGCAGGAGGTCATGGCGGTGGCGTGGGCCTCCGCCCTGTGCAGGGCCGTCCTGAACCTGATAGACCGG CAGCAGATCGGACGCAAGGG
Product: adenosylhomocysteinase
Products: NA
Alternate protein names: S-adenosyl-L-homocysteine hydrolase; AdoHcyase [H]
Number of amino acids: Translated: 380; Mature: 380
Protein sequence:
>380_residues MDSKAFFQAVLDSSVPRRAGKLVLVTHIVPGSENFVLGIHERLPLAAVIPKPSSLHEPTCRVIEEHVPVIHYTRDRIQQN ALGFIAHLRSLIGEEPFAAIDTGGYFSSILAALKKAFPSQLVGIVEDTENGHQKYDAALRSIRAGGGAMFPCPVMSVARS KLKEPEDFLVGQAITFSAEALLRELGNILTGRRALVLGYGKIGSSIARHLHAKGVRVDVYDTNPIRQVLALAHGYHTGPK HELLRTAELIFCATGNRSIGTSDLGAIRRDAYIFTATSADDEIENHQDMIASASPGGHRHVLQVNAQGNQFFLCNEGKSA NFMHGGVVGPFIDLVQAELLFALSRIGDAPRDRVVELGDDAKRFISELWITRFSRQGMVH
Sequences:
>Translated_380_residues MDSKAFFQAVLDSSVPRRAGKLVLVTHIVPGSENFVLGIHERLPLAAVIPKPSSLHEPTCRVIEEHVPVIHYTRDRIQQN ALGFIAHLRSLIGEEPFAAIDTGGYFSSILAALKKAFPSQLVGIVEDTENGHQKYDAALRSIRAGGGAMFPCPVMSVARS KLKEPEDFLVGQAITFSAEALLRELGNILTGRRALVLGYGKIGSSIARHLHAKGVRVDVYDTNPIRQVLALAHGYHTGPK HELLRTAELIFCATGNRSIGTSDLGAIRRDAYIFTATSADDEIENHQDMIASASPGGHRHVLQVNAQGNQFFLCNEGKSA NFMHGGVVGPFIDLVQAELLFALSRIGDAPRDRVVELGDDAKRFISELWITRFSRQGMVH >Mature_380_residues MDSKAFFQAVLDSSVPRRAGKLVLVTHIVPGSENFVLGIHERLPLAAVIPKPSSLHEPTCRVIEEHVPVIHYTRDRIQQN ALGFIAHLRSLIGEEPFAAIDTGGYFSSILAALKKAFPSQLVGIVEDTENGHQKYDAALRSIRAGGGAMFPCPVMSVARS KLKEPEDFLVGQAITFSAEALLRELGNILTGRRALVLGYGKIGSSIARHLHAKGVRVDVYDTNPIRQVLALAHGYHTGPK HELLRTAELIFCATGNRSIGTSDLGAIRRDAYIFTATSADDEIENHQDMIASASPGGHRHVLQVNAQGNQFFLCNEGKSA NFMHGGVVGPFIDLVQAELLFALSRIGDAPRDRVVELGDDAKRFISELWITRFSRQGMVH
Specific function: May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine [H]
COG id: COG0499
COG function: function code H; S-adenosylhomocysteine hydrolase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenosylhomocysteinase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000043 - InterPro: IPR015878 - InterPro: IPR020082 [H]
Pfam domain/function: PF05221 AdoHcyase; PF00670 AdoHcyase_NAD [H]
EC number: =3.3.1.1 [H]
Molecular weight: Translated: 41451; Mature: 41451
Theoretical pI: Translated: 7.79; Mature: 7.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSKAFFQAVLDSSVPRRAGKLVLVTHIVPGSENFVLGIHERLPLAAVIPKPSSLHEPTC CCHHHHHHHHHHCCCCHHCCCEEEEEEECCCCCCEEEEECCCCCEEEECCCCCCCCCHHH RVIEEHVPVIHYTRDRIQQNALGFIAHLRSLIGEEPFAAIDTGGYFSSILAALKKAFPSQ HHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHH LVGIVEDTENGHQKYDAALRSIRAGGGAMFPCPVMSVARSKLKEPEDFLVGQAITFSAEA HHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHCCHHHHHHHH LLRELGNILTGRRALVLGYGKIGSSIARHLHAKGVRVDVYDTNPIRQVLALAHGYHTGPK HHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCCCCH HELLRTAELIFCATGNRSIGTSDLGAIRRDAYIFTATSADDEIENHQDMIASASPGGHRH HHHHHHEEEEEEECCCCCCCCHHHHHHHHCCEEEEECCCCHHHHHHHHHHHCCCCCCCEE VLQVNAQGNQFFLCNEGKSANFMHGGVVGPFIDLVQAELLFALSRIGDAPRDRVVELGDD EEEEECCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHEECCCH AKRFISELWITRFSRQGMVH HHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MDSKAFFQAVLDSSVPRRAGKLVLVTHIVPGSENFVLGIHERLPLAAVIPKPSSLHEPTC CCHHHHHHHHHHCCCCHHCCCEEEEEEECCCCCCEEEEECCCCCEEEECCCCCCCCCHHH RVIEEHVPVIHYTRDRIQQNALGFIAHLRSLIGEEPFAAIDTGGYFSSILAALKKAFPSQ HHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHH LVGIVEDTENGHQKYDAALRSIRAGGGAMFPCPVMSVARSKLKEPEDFLVGQAITFSAEA HHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHCCHHHHHHHH LLRELGNILTGRRALVLGYGKIGSSIARHLHAKGVRVDVYDTNPIRQVLALAHGYHTGPK HHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCCCCH HELLRTAELIFCATGNRSIGTSDLGAIRRDAYIFTATSADDEIENHQDMIASASPGGHRH HHHHHHEEEEEEECCCCCCCCHHHHHHHHCCEEEEECCCCHHHHHHHHHHHCCCCCCCEE VLQVNAQGNQFFLCNEGKSANFMHGGVVGPFIDLVQAELLFALSRIGDAPRDRVVELGDD EEEEECCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHEECCCH AKRFISELWITRFSRQGMVH HHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9440516; 10360571 [H]