Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120610041
Identifier: 120610041
GI number: 120610041
Start: 1482645
End: 1483619
Strand: Direct
Name: 120610041
Synonym: Aave_1354
Alternate gene names: NA
Gene position: 1482645-1483619 (Clockwise)
Preceding gene: 120610040
Following gene: 120610044
Centisome position: 27.7
GC content: 68.92
Gene sequence:
>975_bases ATGCTGAGCCGTACTGCCGATCATCTGTTCTGGATGTCCCGCTACACTGAGCGGGCCGAGAACACCGCCCGCATGCTGAA CGTCAGCTACGAGACCTCGCTGCTGCCGCAATCGGCCGACGTGGCGCAGGAGAGCTGGCTGGGGCTGCTGTCGATCAGCG AGCTGATCCCGGCCTATACCGCGCGCCATGGCGAGGTCACGCGCGAGGGCGTGCTGGAGTTCATGGTGCGCGACGGCGAC AACCCGTCGTCCATCCTCTCCTGCCTGCGCGCGGCCCGCGAGAACGCGCGCGCGGTGCGCGGCGCGCTGACCACCGAGAT ATGGGAGACGCAGAACCAGACCTGGCTGGAGCTGCACCGGCAGCTGCAGGGCCGGGATTTCGAGCGCGACCCGGGGGCGT TCTTCGAATGGGTGAAGTACCGCTCGCACCTCTCGCGGGGCGTGACGCTGGGCACCATGCTGCAGGACGAGGCCTTCCAC TTCCTGCGCCTGGGCACCTTCCTGGAGCGGGCCGACAACACGGCACGGCTGCTGGACGTGAAATTCCATGCCGTGCAGAG CGACTTCCACGGCTCGGCGATGCGCGAGCGCGGCCGGGCAGCGCCGCAGGAGTTCGACTTCTACCACTGGAGCGCGATCC TGCGCAGCGTGTCGGCGTTCGAGGTGTACCGCAAGGTGTACCGCGACGTGATCACGCCCGAGCGCGTGGCCGACCTGCTC ATGCTGCGGGCCGACATGCCGCGCTCGCTGCACGCCAGCCTGCGCGAGGTGGCGGACAACCTCGCCGTGGTCGCCAACGA CCAGTCGGCGGAGACGCAGCGCAAGGCCGGGCGCCTGCTGGCCGACTTGCGCTACGGCCGCATCGACGAGATCCTGGCCA CCGGGCTGCATGCCTACCTCACGCAGTTCCTGGACCGCGTGAACGACCTGGGCGCGGGCATCAGCCGGGATTTCCTGGTG CCCGTTCCGGCCTGA
Upstream 100 bases:
>100_bases ACGCCCGCCGCGGGCCTGTCGCAGTCCATGGGTGCCATGACCCAGACCCTGGGCGCCCCGGGCGCCATGGCCATGTCGCA GTCGATGGGAGGGAAGTGAG
Downstream 100 bases:
>100_bases GTCCGCCCGCCGGGCCGGCCCGCGCGACGCTCTCCCCGGGGGCGGGGCGGGTCAGCGGGGCTGCGCCGTGTCTCCCGAGG CGAGCACGCGCTGCTGCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 324; Mature: 324
Protein sequence:
>324_residues MLSRTADHLFWMSRYTERAENTARMLNVSYETSLLPQSADVAQESWLGLLSISELIPAYTARHGEVTREGVLEFMVRDGD NPSSILSCLRAARENARAVRGALTTEIWETQNQTWLELHRQLQGRDFERDPGAFFEWVKYRSHLSRGVTLGTMLQDEAFH FLRLGTFLERADNTARLLDVKFHAVQSDFHGSAMRERGRAAPQEFDFYHWSAILRSVSAFEVYRKVYRDVITPERVADLL MLRADMPRSLHASLREVADNLAVVANDQSAETQRKAGRLLADLRYGRIDEILATGLHAYLTQFLDRVNDLGAGISRDFLV PVPA
Sequences:
>Translated_324_residues MLSRTADHLFWMSRYTERAENTARMLNVSYETSLLPQSADVAQESWLGLLSISELIPAYTARHGEVTREGVLEFMVRDGD NPSSILSCLRAARENARAVRGALTTEIWETQNQTWLELHRQLQGRDFERDPGAFFEWVKYRSHLSRGVTLGTMLQDEAFH FLRLGTFLERADNTARLLDVKFHAVQSDFHGSAMRERGRAAPQEFDFYHWSAILRSVSAFEVYRKVYRDVITPERVADLL MLRADMPRSLHASLREVADNLAVVANDQSAETQRKAGRLLADLRYGRIDEILATGLHAYLTQFLDRVNDLGAGISRDFLV PVPA >Mature_324_residues MLSRTADHLFWMSRYTERAENTARMLNVSYETSLLPQSADVAQESWLGLLSISELIPAYTARHGEVTREGVLEFMVRDGD NPSSILSCLRAARENARAVRGALTTEIWETQNQTWLELHRQLQGRDFERDPGAFFEWVKYRSHLSRGVTLGTMLQDEAFH FLRLGTFLERADNTARLLDVKFHAVQSDFHGSAMRERGRAAPQEFDFYHWSAILRSVSAFEVYRKVYRDVITPERVADLL MLRADMPRSLHASLREVADNLAVVANDQSAETQRKAGRLLADLRYGRIDEILATGLHAYLTQFLDRVNDLGAGISRDFLV PVPA
Specific function: Unknown
COG id: COG2307
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36960; Mature: 36960
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSRTADHLFWMSRYTERAENTARMLNVSYETSLLPQSADVAQESWLGLLSISELIPAYT CCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH ARHGEVTREGVLEFMVRDGDNPSSILSCLRAARENARAVRGALTTEIWETQNQTWLELHR HCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH QLQGRDFERDPGAFFEWVKYRSHLSRGVTLGTMLQDEAFHFLRLGTFLERADNTARLLDV HHCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH KFHAVQSDFHGSAMRERGRAAPQEFDFYHWSAILRSVSAFEVYRKVYRDVITPERVADLL HHHHHHHCCCHHHHHHHCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH MLRADMPRSLHASLREVADNLAVVANDQSAETQRKAGRLLADLRYGRIDEILATGLHAYL HHHHCCCHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH TQFLDRVNDLGAGISRDFLVPVPA HHHHHHHHHHCCCCCCCCEECCCC >Mature Secondary Structure MLSRTADHLFWMSRYTERAENTARMLNVSYETSLLPQSADVAQESWLGLLSISELIPAYT CCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH ARHGEVTREGVLEFMVRDGDNPSSILSCLRAARENARAVRGALTTEIWETQNQTWLELHR HCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH QLQGRDFERDPGAFFEWVKYRSHLSRGVTLGTMLQDEAFHFLRLGTFLERADNTARLLDV HHCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH KFHAVQSDFHGSAMRERGRAAPQEFDFYHWSAILRSVSAFEVYRKVYRDVITPERVADLL HHHHHHHCCCHHHHHHHCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH MLRADMPRSLHASLREVADNLAVVANDQSAETQRKAGRLLADLRYGRIDEILATGLHAYL HHHHCCCHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH TQFLDRVNDLGAGISRDFLVPVPA HHHHHHHHHHCCCCCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA