Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

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The map label for this gene is 120610040

Identifier: 120610040

GI number: 120610040

Start: 1481087

End: 1482643

Strand: Direct

Name: 120610040

Synonym: Aave_1353

Alternate gene names: NA

Gene position: 1481087-1482643 (Clockwise)

Preceding gene: 120610039

Following gene: 120610041

Centisome position: 27.67

GC content: 68.46

Gene sequence:

>1557_bases
ATGCAGAAGTTCGACGAGATGTACGAGATGCTGCCCTTCGATGGCAGCGATGTGCGCCCCCACTACCAGCGCTACGGCCA
GTGGCTGTCGCGCCAGCCGGCCGAGGCGATGCAGGCGCGCCGCGCCGAGGCCGAGATGATCTTCCGCCGCGTGGGCATCA
CCTTCGCGGTCTATGGCGCCAAGGACGAGAACGGGGCCGGCACCGAGCGGCTCATCCCCTTCGACCTGATCCCCCGCATC
ATTCCCGCCCACGAATGGGCGCGCATGCAGCAGGGGCTCGTGCAGCGGGTGACGGCGCTCAACCGCTTCATCCACGACAT
CTACCATGGCCAGGACATCCTGCGCGCGGGCATCGTGCCGTCCGACCTGATCGTGGGCAATGCGCAGTTCCGCCCCGAGA
TGGCGGGCGTGGACGTGCCGTGCGACGTGTACGCCCACATCGCCGGCATCGACATCGTGCGCGCGCCGGACGGGCAGGGC
AACGGCATCTACTACGTGCTGGAGGACAACCTGCGCGTGCCCTCGGGCGTGTCGTACATGCTGGAGAACCGCAAGATGAT
GATGCGGCTCTTCCCCGAACTGTTCCGCAGCCACCGCGTGGCGCCCGTGGCCCACTACCCCGACCTGCTGCTGGACACGC
TGCGCGCCAGCGCGCCGGCCGGCGCGGCCGAGCCCACGGTGGTGTTGCTCACCCCGGGCATGTACAACAGCGCGTACTTC
GAGCATGCCTTCCTCGCGCAGCAGATGGGCGTGGAGCTGGTCGAGGGGCAGGACCTGGTCGTCAAGGAGAACTTCGTCTA
CATGCGCACCACGCGCGGGCTGCAGCGCGTGGATGTGATCTACCGCCGCGTGGACGACGACTTCCTCGATCCGCAGGTCT
TCCGTCCTGCGTCCACGCTGGGCTGCGCCGGCCTCATGGCTGCGTACCGCGCGGGCAACGTGGCGATCTGCAATGCCGTG
GGCACGGGCATCGCGGACGACAAGTCCGTCTATCCGTACGTGCCGGAGATGATCCGCTTCTACCTGGGCGAAGAGCCCAT
CCTGGCGAACGTGCCCACCTGGATGTGCCGCAAGCAGGACGACCTGCGGTACGTGCTGGACCACCTGCACGAGCTGGTGG
TGAAGGAAGTGCACGGCGCGGGCGGCTACGGCATGCTGATCGGCCCGGCCGCGACCAAGGCGGAAATCGAGGAGTTCCGC
GGCGCGCTGCTGGCGAACCCGGCCGGCTACATCGCGCAGCCCACGCTGTCGCTCTCGAGCTGCCCCACCTACGTGGAATC
GGGCATCGCCCCGCGCCACATCGACCTGCGGCCCTTCGTGCTCTCTGGCCAGAAGGTGCAGATGGTGGCCGGCGGTCTCA
CGCGCGTGGCGCTGAAGGAGGGTTCGCTGGTCGTCAATTCATCGCAGGGCGGCGGCACCAAGGACACCTGGGTGCTGGGC
GACGGCGACGCCAACGGCACGCCCGCCGCGGGCCTGTCGCAGTCCATGGGTGCCATGACCCAGACCCTGGGCGCCCCGGG
CGCCATGGCCATGTCGCAGTCGATGGGAGGGAAGTGA

Upstream 100 bases:

>100_bases
TTTCTGACAGCGGAATCCGGCGAAGCCCCGCGCACGGGGCGCGCGACCGGCGGCCTGGCAGGCTTGCAACTTGCTATGCT
GGCTGCAGGAGGCACCACTG

Downstream 100 bases:

>100_bases
GATGCTGAGCCGTACTGCCGATCATCTGTTCTGGATGTCCCGCTACACTGAGCGGGCCGAGAACACCGCCCGCATGCTGA
ACGTCAGCTACGAGACCTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 518; Mature: 518

Protein sequence:

>518_residues
MQKFDEMYEMLPFDGSDVRPHYQRYGQWLSRQPAEAMQARRAEAEMIFRRVGITFAVYGAKDENGAGTERLIPFDLIPRI
IPAHEWARMQQGLVQRVTALNRFIHDIYHGQDILRAGIVPSDLIVGNAQFRPEMAGVDVPCDVYAHIAGIDIVRAPDGQG
NGIYYVLEDNLRVPSGVSYMLENRKMMMRLFPELFRSHRVAPVAHYPDLLLDTLRASAPAGAAEPTVVLLTPGMYNSAYF
EHAFLAQQMGVELVEGQDLVVKENFVYMRTTRGLQRVDVIYRRVDDDFLDPQVFRPASTLGCAGLMAAYRAGNVAICNAV
GTGIADDKSVYPYVPEMIRFYLGEEPILANVPTWMCRKQDDLRYVLDHLHELVVKEVHGAGGYGMLIGPAATKAEIEEFR
GALLANPAGYIAQPTLSLSSCPTYVESGIAPRHIDLRPFVLSGQKVQMVAGGLTRVALKEGSLVVNSSQGGGTKDTWVLG
DGDANGTPAAGLSQSMGAMTQTLGAPGAMAMSQSMGGK

Sequences:

>Translated_518_residues
MQKFDEMYEMLPFDGSDVRPHYQRYGQWLSRQPAEAMQARRAEAEMIFRRVGITFAVYGAKDENGAGTERLIPFDLIPRI
IPAHEWARMQQGLVQRVTALNRFIHDIYHGQDILRAGIVPSDLIVGNAQFRPEMAGVDVPCDVYAHIAGIDIVRAPDGQG
NGIYYVLEDNLRVPSGVSYMLENRKMMMRLFPELFRSHRVAPVAHYPDLLLDTLRASAPAGAAEPTVVLLTPGMYNSAYF
EHAFLAQQMGVELVEGQDLVVKENFVYMRTTRGLQRVDVIYRRVDDDFLDPQVFRPASTLGCAGLMAAYRAGNVAICNAV
GTGIADDKSVYPYVPEMIRFYLGEEPILANVPTWMCRKQDDLRYVLDHLHELVVKEVHGAGGYGMLIGPAATKAEIEEFR
GALLANPAGYIAQPTLSLSSCPTYVESGIAPRHIDLRPFVLSGQKVQMVAGGLTRVALKEGSLVVNSSQGGGTKDTWVLG
DGDANGTPAAGLSQSMGAMTQTLGAPGAMAMSQSMGGK
>Mature_518_residues
MQKFDEMYEMLPFDGSDVRPHYQRYGQWLSRQPAEAMQARRAEAEMIFRRVGITFAVYGAKDENGAGTERLIPFDLIPRI
IPAHEWARMQQGLVQRVTALNRFIHDIYHGQDILRAGIVPSDLIVGNAQFRPEMAGVDVPCDVYAHIAGIDIVRAPDGQG
NGIYYVLEDNLRVPSGVSYMLENRKMMMRLFPELFRSHRVAPVAHYPDLLLDTLRASAPAGAAEPTVVLLTPGMYNSAYF
EHAFLAQQMGVELVEGQDLVVKENFVYMRTTRGLQRVDVIYRRVDDDFLDPQVFRPASTLGCAGLMAAYRAGNVAICNAV
GTGIADDKSVYPYVPEMIRFYLGEEPILANVPTWMCRKQDDLRYVLDHLHELVVKEVHGAGGYGMLIGPAATKAEIEEFR
GALLANPAGYIAQPTLSLSSCPTYVESGIAPRHIDLRPFVLSGQKVQMVAGGLTRVALKEGSLVVNSSQGGGTKDTWVLG
DGDANGTPAAGLSQSMGAMTQTLGAPGAMAMSQSMGGK

Specific function: Unknown

COG id: COG2308

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.tuberculosis RV2411c [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007297
- InterPro:   IPR007302
- InterPro:   IPR016450 [H]

Pfam domain/function: PF04169 DUF404; PF04174 DUF407 [H]

EC number: NA

Molecular weight: Translated: 56761; Mature: 56761

Theoretical pI: Translated: 5.95; Mature: 5.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKFDEMYEMLPFDGSDVRPHYQRYGQWLSRQPAEAMQARRAEAEMIFRRVGITFAVYGA
CCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCEEEEEEC
KDENGAGTERLIPFDLIPRIIPAHEWARMQQGLVQRVTALNRFIHDIYHGQDILRAGIVP
CCCCCCCCCEECCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCC
SDLIVGNAQFRPEMAGVDVPCDVYAHIAGIDIVRAPDGQGNGIYYVLEDNLRVPSGVSYM
CCEEECCCCCCCCCCCCCCCHHHHHHHHCEEEEECCCCCCCCEEEEEECCCCCCCCHHHH
LENRKMMMRLFPELFRSHRVAPVAHYPDLLLDTLRASAPAGAAEPTVVLLTPGMYNSAYF
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHH
EHAFLAQQMGVELVEGQDLVVKENFVYMRTTRGLQRVDVIYRRVDDDFLDPQVFRPASTL
HHHHHHHHHCCEEECCCCEEEECCEEEEEHHCCHHHHHHHHHHHCCCCCCCHHCCCHHHH
GCAGLMAAYRAGNVAICNAVGTGIADDKSVYPYVPEMIRFYLGEEPILANVPTWMCRKQD
HHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCEEECCCHHHHCCCC
DLRYVLDHLHELVVKEVHGAGGYGMLIGPAATKAEIEEFRGALLANPAGYIAQPTLSLSS
HHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHCCHHHCCCCCCEECCCCCHHC
CPTYVESGIAPRHIDLRPFVLSGQKVQMVAGGLTRVALKEGSLVVNSSQGGGTKDTWVLG
CCHHHHCCCCCCEECCCCEEECCCEEEEECCCHHEEEEECCCEEEECCCCCCCCCEEEEE
DGDANGTPAAGLSQSMGAMTQTLGAPGAMAMSQSMGGK
CCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCC
>Mature Secondary Structure
MQKFDEMYEMLPFDGSDVRPHYQRYGQWLSRQPAEAMQARRAEAEMIFRRVGITFAVYGA
CCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCEEEEEEC
KDENGAGTERLIPFDLIPRIIPAHEWARMQQGLVQRVTALNRFIHDIYHGQDILRAGIVP
CCCCCCCCCEECCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCC
SDLIVGNAQFRPEMAGVDVPCDVYAHIAGIDIVRAPDGQGNGIYYVLEDNLRVPSGVSYM
CCEEECCCCCCCCCCCCCCCHHHHHHHHCEEEEECCCCCCCCEEEEEECCCCCCCCHHHH
LENRKMMMRLFPELFRSHRVAPVAHYPDLLLDTLRASAPAGAAEPTVVLLTPGMYNSAYF
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHH
EHAFLAQQMGVELVEGQDLVVKENFVYMRTTRGLQRVDVIYRRVDDDFLDPQVFRPASTL
HHHHHHHHHCCEEECCCCEEEECCEEEEEHHCCHHHHHHHHHHHCCCCCCCHHCCCHHHH
GCAGLMAAYRAGNVAICNAVGTGIADDKSVYPYVPEMIRFYLGEEPILANVPTWMCRKQD
HHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCEEECCCHHHHCCCC
DLRYVLDHLHELVVKEVHGAGGYGMLIGPAATKAEIEEFRGALLANPAGYIAQPTLSLSS
HHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHCCHHHCCCCCCEECCCCCHHC
CPTYVESGIAPRHIDLRPFVLSGQKVQMVAGGLTRVALKEGSLVVNSSQGGGTKDTWVLG
CCHHHHCCCCCCEECCCCEEECCCEEEEECCCHHEEEEECCCEEEECCCCCCCCCEEEEE
DGDANGTPAAGLSQSMGAMTQTLGAPGAMAMSQSMGGK
CCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1368738; 8590279; 8905231 [H]