Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120610036
Identifier: 120610036
GI number: 120610036
Start: 1475970
End: 1476770
Strand: Direct
Name: 120610036
Synonym: Aave_1349
Alternate gene names: NA
Gene position: 1475970-1476770 (Clockwise)
Preceding gene: 120610035
Following gene: 120610037
Centisome position: 27.57
GC content: 68.79
Gene sequence:
>801_bases GTGTCTCTCGGGGCAGCTGACGTCCGGCGGGCGGCCAGGCCTGCCCTGGCCCAACCGGCCCAACCGCGCCTGCGCGTCCT CGCAGGGCCCAACGGATCCGGCAAGAGCACCCTCCAGTCCGAACTCAAGCCCCAATGGATCGGCGCCTTCGTGAACGCCG ACGAGATCGAGAAGGCACTCCACGCCTCCGGCGGCTGCCTGGCGTTGCGGGAACTCGGCGTGACGGGCGAGCCCCCGGCG GTGCTGGAGCGGATCCGCGGCAGCTTCCAGACATTCGGCCTGGGGCGGCGGCTGGACATGCCGGCCCTGCTGGCCGGAAT CACGCTAGACGGTGAATTGACCCTCCGGATGCCCGGGCCCTGGGACTCCTACCTGGCCGCCACGCTGGCCGAGGCCGTGC GCCGGGAACTGCGGGACGAAGGCCGTACCTTCACGTTCGAGACCGTCATGTCGCACCGCTCGAAGATCGACTTCATGCGC GAAACCCGTGCGCGGGGCTACCGGGTCTATCTGTACTTCGTGGCGACCGACGACCCCGCCATCAACATCGACCGGGTGCG GCGGCGCGTGCTGCAGGGCGGCCATCCGGTGCCCGAGGACAAGGTCATCGACCGGTACCACAAGTCCATCGCGCTGATGA CCGAGGCCTGCGAGGTGGCGCACCGTGCCTACATCTTCGACAACTCGGGCGCCAGGCACAGGCTGCTTGCCGAGGTGACG GATTTCGACACCCTCCGGCTGGAGTCCAGCGTGCTCAACCCGTGGTTTCTCGGCACCGGGCTGTGGAGGGCGTTTTCCTG A
Upstream 100 bases:
>100_bases GCTTCCGGCCAGGTCGTCGAGCGCCGGATCGACGGCAGCGTCACCGTCATCAAAGACCTTCCGGTGGGCAAGCGCGTCAA GCCGGGCACGGTCCTCAAGC
Downstream 100 bases:
>100_bases AGCAGGGCGTTGGCACGCAGTGAAACAGTTTGTGTCTCTAACTTGCCAAGCAAAGCGTTCCTCCATGAAATCCTCAGCGT TATCAACGATGGGGAGATAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 266; Mature: 265
Protein sequence:
>266_residues MSLGAADVRRAARPALAQPAQPRLRVLAGPNGSGKSTLQSELKPQWIGAFVNADEIEKALHASGGCLALRELGVTGEPPA VLERIRGSFQTFGLGRRLDMPALLAGITLDGELTLRMPGPWDSYLAATLAEAVRRELRDEGRTFTFETVMSHRSKIDFMR ETRARGYRVYLYFVATDDPAINIDRVRRRVLQGGHPVPEDKVIDRYHKSIALMTEACEVAHRAYIFDNSGARHRLLAEVT DFDTLRLESSVLNPWFLGTGLWRAFS
Sequences:
>Translated_266_residues MSLGAADVRRAARPALAQPAQPRLRVLAGPNGSGKSTLQSELKPQWIGAFVNADEIEKALHASGGCLALRELGVTGEPPA VLERIRGSFQTFGLGRRLDMPALLAGITLDGELTLRMPGPWDSYLAATLAEAVRRELRDEGRTFTFETVMSHRSKIDFMR ETRARGYRVYLYFVATDDPAINIDRVRRRVLQGGHPVPEDKVIDRYHKSIALMTEACEVAHRAYIFDNSGARHRLLAEVT DFDTLRLESSVLNPWFLGTGLWRAFS >Mature_265_residues SLGAADVRRAARPALAQPAQPRLRVLAGPNGSGKSTLQSELKPQWIGAFVNADEIEKALHASGGCLALRELGVTGEPPAV LERIRGSFQTFGLGRRLDMPALLAGITLDGELTLRMPGPWDSYLAATLAEAVRRELRDEGRTFTFETVMSHRSKIDFMRE TRARGYRVYLYFVATDDPAINIDRVRRRVLQGGHPVPEDKVIDRYHKSIALMTEACEVAHRAYIFDNSGARHRLLAEVTD FDTLRLESSVLNPWFLGTGLWRAFS
Specific function: Unknown
COG id: COG4185
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29601; Mature: 29470
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLGAADVRRAARPALAQPAQPRLRVLAGPNGSGKSTLQSELKPQWIGAFVNADEIEKAL CCCCHHHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHHHCCHHHHHHHCCHHHHHHHH HASGGCLALRELGVTGEPPAVLERIRGSFQTFGLGRRLDMPALLAGITLDGELTLRMPGP HCCCCEEEHHHCCCCCCCHHHHHHHHCCHHHHCCCCCCCCHHHHHEEEECCEEEEECCCC WDSYLAATLAEAVRRELRDEGRTFTFETVMSHRSKIDFMRETRARGYRVYLYFVATDDPA CHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCC INIDRVRRRVLQGGHPVPEDKVIDRYHKSIALMTEACEVAHRAYIFDNSGARHRLLAEVT CCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHH DFDTLRLESSVLNPWFLGTGLWRAFS CCHHHHHHHHHCCCHHHHHHHHHHCC >Mature Secondary Structure SLGAADVRRAARPALAQPAQPRLRVLAGPNGSGKSTLQSELKPQWIGAFVNADEIEKAL CCCHHHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHHHCCHHHHHHHCCHHHHHHHH HASGGCLALRELGVTGEPPAVLERIRGSFQTFGLGRRLDMPALLAGITLDGELTLRMPGP HCCCCEEEHHHCCCCCCCHHHHHHHHCCHHHHCCCCCCCCHHHHHEEEECCEEEEECCCC WDSYLAATLAEAVRRELRDEGRTFTFETVMSHRSKIDFMRETRARGYRVYLYFVATDDPA CHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCC INIDRVRRRVLQGGHPVPEDKVIDRYHKSIALMTEACEVAHRAYIFDNSGARHRLLAEVT CCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHH DFDTLRLESSVLNPWFLGTGLWRAFS CCHHHHHHHHHCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA