Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120610037
Identifier: 120610037
GI number: 120610037
Start: 1476874
End: 1477581
Strand: Direct
Name: 120610037
Synonym: Aave_1350
Alternate gene names: NA
Gene position: 1476874-1477581 (Clockwise)
Preceding gene: 120610036
Following gene: 120610038
Centisome position: 27.59
GC content: 61.02
Gene sequence:
>708_bases ATGCAGGATGAGCATCGGAACAACGCCACGCTCGAAACCGCGCTATCGCAGTTGGAGTCGGCATGCGCGAACTTTGCGCA GCGATTTCTGAAGGATGGGCGAGTACGCCAGAGCTATATCGAGCAAACCAGAAGGCTTTCCCAAGAGTATCGGGCGCGTG TGGCGTCCGGTGCCTTGAGTCCGCAGGAGGCTGCAACACAGGTGCAGTCGATCCGCAATGAAATTCTGGAGGTGCAGCGC TTGCGCTCCAGCGACATAGGGCGGGCGAAGGCGATCCAGCTGAAGAAGGTCGGTTTGAGTCTCGATGCTCTGACCGAAAA GTATGCGAAAGACAAGTTCGGCAAGCCCTTTGCGCAACTGGCGACCAATGAGCGCAATCTTGTCTATCTGGAAATCATTG ATAGTTCCGGTCGTCCCAGGCCCTCGGTCAATGCGGCGGCACGGCGCTATACCACTCTGGGCCGCGGCCTGGTTTTCGTA TCCCTGGGGGCAGCGGTCTACAACGTTGCCGTGGCGGACGACAAGGCCCGTGCGGTGGCAAAGGAGGGAGCCGTGGTCGG AGGCGGGTTTGCCGGCGGTGCTGCTGGAGGTGCTCTTGCCGGGCTGGCATGCGGGCCGGGTGCACCTGTCTGCGTCACGC TCGGTGTGTTTGTGGGGGGCGCCCTGGGAGCACTGGGAGCGGATGTGTCTTTTGACTGGGTGTTCTGA
Upstream 100 bases:
>100_bases AGGGCGTTGGCACGCAGTGAAACAGTTTGTGTCTCTAACTTGCCAAGCAAAGCGTTCCTCCATGAAATCCTCAGCGTTAT CAACGATGGGGAGATAGAGC
Downstream 100 bases:
>100_bases TGCAGGCTCTCCAGCCATCGTCTGCGTTCTCTGTGGAATGCAATACCACCAGCGACGCAACTCCCCCCCGGCTCTGCCTG CGGCATCGCGAGGACGGGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 235; Mature: 235
Protein sequence:
>235_residues MQDEHRNNATLETALSQLESACANFAQRFLKDGRVRQSYIEQTRRLSQEYRARVASGALSPQEAATQVQSIRNEILEVQR LRSSDIGRAKAIQLKKVGLSLDALTEKYAKDKFGKPFAQLATNERNLVYLEIIDSSGRPRPSVNAAARRYTTLGRGLVFV SLGAAVYNVAVADDKARAVAKEGAVVGGGFAGGAAGGALAGLACGPGAPVCVTLGVFVGGALGALGADVSFDWVF
Sequences:
>Translated_235_residues MQDEHRNNATLETALSQLESACANFAQRFLKDGRVRQSYIEQTRRLSQEYRARVASGALSPQEAATQVQSIRNEILEVQR LRSSDIGRAKAIQLKKVGLSLDALTEKYAKDKFGKPFAQLATNERNLVYLEIIDSSGRPRPSVNAAARRYTTLGRGLVFV SLGAAVYNVAVADDKARAVAKEGAVVGGGFAGGAAGGALAGLACGPGAPVCVTLGVFVGGALGALGADVSFDWVF >Mature_235_residues MQDEHRNNATLETALSQLESACANFAQRFLKDGRVRQSYIEQTRRLSQEYRARVASGALSPQEAATQVQSIRNEILEVQR LRSSDIGRAKAIQLKKVGLSLDALTEKYAKDKFGKPFAQLATNERNLVYLEIIDSSGRPRPSVNAAARRYTTLGRGLVFV SLGAAVYNVAVADDKARAVAKEGAVVGGGFAGGAAGGALAGLACGPGAPVCVTLGVFVGGALGALGADVSFDWVF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24817; Mature: 24817
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQDEHRNNATLETALSQLESACANFAQRFLKDGRVRQSYIEQTRRLSQEYRARVASGALS CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCC PQEAATQVQSIRNEILEVQRLRSSDIGRAKAIQLKKVGLSLDALTEKYAKDKFGKPFAQL HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHH ATNERNLVYLEIIDSSGRPRPSVNAAARRYTTLGRGLVFVSLGAAVYNVAVADDKARAVA HCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHH KEGAVVGGGFAGGAAGGALAGLACGPGAPVCVTLGVFVGGALGALGADVSFDWVF HCCCEEECCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECC >Mature Secondary Structure MQDEHRNNATLETALSQLESACANFAQRFLKDGRVRQSYIEQTRRLSQEYRARVASGALS CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCC PQEAATQVQSIRNEILEVQRLRSSDIGRAKAIQLKKVGLSLDALTEKYAKDKFGKPFAQL HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHH ATNERNLVYLEIIDSSGRPRPSVNAAARRYTTLGRGLVFVSLGAAVYNVAVADDKARAVA HCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHH KEGAVVGGGFAGGAAGGALAGLACGPGAPVCVTLGVFVGGALGALGADVSFDWVF HCCCEEECCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA