Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120610012
Identifier: 120610012
GI number: 120610012
Start: 1451408
End: 1451698
Strand: Reverse
Name: 120610012
Synonym: Aave_1325
Alternate gene names: NA
Gene position: 1451698-1451408 (Counterclockwise)
Preceding gene: 120610013
Following gene: 120610011
Centisome position: 27.12
GC content: 68.38
Gene sequence:
>291_bases ATGAGCAGTGCCTACATCATCGCGTCCGTCACCGTCACCAACCCCGAACAGTACGAAGACTACCGCCGCCTCAGCACGCA GGCCATGCAGGTGCACGGCGCCGAGGTGTGCGTGCGCGGTGGCCGCGTGGAAGTGCTGGAGGGCGACTGGAACCCGGGCC GCACCGTGGTCCTGAAGTTCCCCACCATGGAGGCCGCCCGCGCCTTCTACGAATCCGCCGAGTACCAGCAGGCGAAGGCC GCGCGCCTGGGCGCGGCCGTCATGCGCATGGTGTGCGTCGAAGGGGTGTGA
Upstream 100 bases:
>100_bases TCAAGCACATGAAGGCGCTGCTGGAAACCCTCGTCGCCCTGGATTCCGTCACCAAGCGGAATGGCTTTCTCGAAAACGAC TTCGGAGCTTGAGACATCCC
Downstream 100 bases:
>100_bases GGCCTTCCGGCCCGGACTCCGGCTCGGCTGCAGCCATGCTGTAGCGGCGCAAGCCCGTGCCGCCTTGGCCGAGGTTTCCA AGACCCCGGACCGGGGCCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 96; Mature: 95
Protein sequence:
>96_residues MSSAYIIASVTVTNPEQYEDYRRLSTQAMQVHGAEVCVRGGRVEVLEGDWNPGRTVVLKFPTMEAARAFYESAEYQQAKA ARLGAAVMRMVCVEGV
Sequences:
>Translated_96_residues MSSAYIIASVTVTNPEQYEDYRRLSTQAMQVHGAEVCVRGGRVEVLEGDWNPGRTVVLKFPTMEAARAFYESAEYQQAKA ARLGAAVMRMVCVEGV >Mature_95_residues SSAYIIASVTVTNPEQYEDYRRLSTQAMQVHGAEVCVRGGRVEVLEGDWNPGRTVVLKFPTMEAARAFYESAEYQQAKAA RLGAAVMRMVCVEGV
Specific function: Unknown
COG id: COG5470
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10604; Mature: 10473
Theoretical pI: Translated: 5.84; Mature: 5.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSAYIIASVTVTNPEQYEDYRRLSTQAMQVHGAEVCVRGGRVEVLEGDWNPGRTVVLKF CCCCEEEEEEEECCCHHHHHHHHHHHHHHHHCCHHEEEECCEEEEEECCCCCCCEEEEEC PTMEAARAFYESAEYQQAKAARLGAAVMRMVCVEGV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SSAYIIASVTVTNPEQYEDYRRLSTQAMQVHGAEVCVRGGRVEVLEGDWNPGRTVVLKF CCCEEEEEEEECCCHHHHHHHHHHHHHHHHCCHHEEEECCEEEEEECCCCCCCEEEEEC PTMEAARAFYESAEYQQAKAARLGAAVMRMVCVEGV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA