Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120610010
Identifier: 120610010
GI number: 120610010
Start: 1449904
End: 1450395
Strand: Reverse
Name: 120610010
Synonym: Aave_1323
Alternate gene names: NA
Gene position: 1450395-1449904 (Counterclockwise)
Preceding gene: 120610011
Following gene: 120610009
Centisome position: 27.1
GC content: 66.26
Gene sequence:
>492_bases ATGATCCACAAAGCTGCAGCGGTCACGATGTCGTCCCTCATCATGGGACTCTTGCTGACGCCCCTGATCTACATCGGCAT CGGTGCGCTGGGCGGTTTCGGCGCAGGCTTCGCCATCATTTCGCTGCCGGTGCTTCTGGCGTGCAGCGCGTTCCTTTTCC ACCGCTACCTGCGCCGTCCGGCAGCGCCATCGGGGCGTGCGCCCTGGCTTCAGGTGGCCGAAGCCGCCTCCTGGCTGCTG GTCGTTTTTTTCCTGGCGATCGTCTCCGGCTTCACACTGCTGACGACGGCCGAGCGGATCGGCCTGTTCTGCACGCTCGT GCTGGTGGCCGCCTTGTTCGCCGCGCCCTGGATGGCGCTGCGTCCCAGCGCCCTGGCTGCCCGCGTCGCGCAATGGCCCA CGGCCGCCCTGGCAGCGGGAGCGCTGGCCATGGGGGTGTTGCTGATCGGCTGCACCGTGGTGTACCTGCTCACGCCCTCA CGTTTTATATAA
Upstream 100 bases:
>100_bases TCACCGCGTGGTGGCAATTGCAGCACCAGTTCGGATTCTGGCCCCTGGTCACGCGGGCCGTGACCACCAAGACGTATGAA GTCCCGACGGATTGATACCC
Downstream 100 bases:
>100_bases ACCCTCGCCTTGCGGACGCAGACGGTGCATTGGAGAGTCCATGCTACGGCGCTGCCTGCCGCTCATCGATAATCTTTCAA AACTGGAGAACCTGTAATGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 163; Mature: 163
Protein sequence:
>163_residues MIHKAAAVTMSSLIMGLLLTPLIYIGIGALGGFGAGFAIISLPVLLACSAFLFHRYLRRPAAPSGRAPWLQVAEAASWLL VVFFLAIVSGFTLLTTAERIGLFCTLVLVAALFAAPWMALRPSALAARVAQWPTAALAAGALAMGVLLIGCTVVYLLTPS RFI
Sequences:
>Translated_163_residues MIHKAAAVTMSSLIMGLLLTPLIYIGIGALGGFGAGFAIISLPVLLACSAFLFHRYLRRPAAPSGRAPWLQVAEAASWLL VVFFLAIVSGFTLLTTAERIGLFCTLVLVAALFAAPWMALRPSALAARVAQWPTAALAAGALAMGVLLIGCTVVYLLTPS RFI >Mature_163_residues MIHKAAAVTMSSLIMGLLLTPLIYIGIGALGGFGAGFAIISLPVLLACSAFLFHRYLRRPAAPSGRAPWLQVAEAASWLL VVFFLAIVSGFTLLTTAERIGLFCTLVLVAALFAAPWMALRPSALAARVAQWPTAALAAGALAMGVLLIGCTVVYLLTPS RFI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17085; Mature: 17085
Theoretical pI: Translated: 10.73; Mature: 10.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIHKAAAVTMSSLIMGLLLTPLIYIGIGALGGFGAGFAIISLPVLLACSAFLFHRYLRRP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC AAPSGRAPWLQVAEAASWLLVVFFLAIVSGFTLLTTAERIGLFCTLVLVAALFAAPWMAL CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH RPSALAARVAQWPTAALAAGALAMGVLLIGCTVVYLLTPSRFI CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MIHKAAAVTMSSLIMGLLLTPLIYIGIGALGGFGAGFAIISLPVLLACSAFLFHRYLRRP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC AAPSGRAPWLQVAEAASWLLVVFFLAIVSGFTLLTTAERIGLFCTLVLVAALFAAPWMAL CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH RPSALAARVAQWPTAALAAGALAMGVLLIGCTVVYLLTPSRFI CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA