Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is yjeE [C]
Identifier: 120609993
GI number: 120609993
Start: 1433476
End: 1434021
Strand: Reverse
Name: yjeE [C]
Synonym: Aave_1306
Alternate gene names: 120609993
Gene position: 1434021-1433476 (Counterclockwise)
Preceding gene: 120609995
Following gene: 120609992
Centisome position: 26.79
GC content: 69.78
Gene sequence:
>546_bases TTGACTGCTGCACGACATCACCCGGGGATTGTAGAAAGCACCTCCGGAACCGACACCCTGCGAAGGGTCTGGCGGAGCGA GGACGACACCGCGGCATTCGCGCGCGCGCTCGCCGCGCAGCCCGCGCTGGCGAACGCCTTCGTCACCCTGCACGGCGACC TGGGAACGGGCAAGACGACCTTCGTGCGGCACCTGCTGCGGGCCCTGGGCGTACAGGGCCGGATCAAGAGCCCGACCTAC GCCGTGGTCGAACCGCACGACACCGACGCCGGGCCGGCGTGGCATTTCGACTTCTACCGCTTCGGCGATCCCCGCGAATG GGAGGACGCAGGTTTTCGCGACATCTTCGCGGGCCCCGGCCTGAAGCTGGCCGAATGGCCCGAGAAGGCCGCGGGATTGC TGCCCACCGCCGACCTTGTCCTACAGATCGAAGCCCCCTCTCCCGCCAACGGCGCGTACGATGGCGACGGCACGGCCCGG CTGGCCCTGCTGCGCGCCGGCACACCCCTTGGCCGCACCCTGGTGCAAGCACTCCCCGCAGCATGA
Upstream 100 bases:
>100_bases ATTGCATCAACCCCGGCTCCGCCGACGACAAATCCACGCCGGCGACGCCAATTTGGGAAAATCCCAGTTCGCGGGCCCAG CCTTGCATTTGAGGAACGAG
Downstream 100 bases:
>100_bases GCGAAGACGCCTCCCCCCTCCTCCACCCACCTGCCGCCTCCTTGCCCCCGCCCCATGGCCCATCGCGGCGCGGGCTGCTG CGCGCCGGGTCCCTGGTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 181; Mature: 180
Protein sequence:
>181_residues MTAARHHPGIVESTSGTDTLRRVWRSEDDTAAFARALAAQPALANAFVTLHGDLGTGKTTFVRHLLRALGVQGRIKSPTY AVVEPHDTDAGPAWHFDFYRFGDPREWEDAGFRDIFAGPGLKLAEWPEKAAGLLPTADLVLQIEAPSPANGAYDGDGTAR LALLRAGTPLGRTLVQALPAA
Sequences:
>Translated_181_residues MTAARHHPGIVESTSGTDTLRRVWRSEDDTAAFARALAAQPALANAFVTLHGDLGTGKTTFVRHLLRALGVQGRIKSPTY AVVEPHDTDAGPAWHFDFYRFGDPREWEDAGFRDIFAGPGLKLAEWPEKAAGLLPTADLVLQIEAPSPANGAYDGDGTAR LALLRAGTPLGRTLVQALPAA >Mature_180_residues TAARHHPGIVESTSGTDTLRRVWRSEDDTAAFARALAAQPALANAFVTLHGDLGTGKTTFVRHLLRALGVQGRIKSPTYA VVEPHDTDAGPAWHFDFYRFGDPREWEDAGFRDIFAGPGLKLAEWPEKAAGLLPTADLVLQIEAPSPANGAYDGDGTARL ALLRAGTPLGRTLVQALPAA
Specific function: Unknown
COG id: COG0802
COG function: function code R; Predicted ATPase or kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0079 family [H]
Homologues:
Organism=Escherichia coli, GI1790610, Length=97, Percent_Identity=50.5154639175258, Blast_Score=109, Evalue=9e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003442 [H]
Pfam domain/function: PF02367 UPF0079 [H]
EC number: NA
Molecular weight: Translated: 19335; Mature: 19204
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAARHHPGIVESTSGTDTLRRVWRSEDDTAAFARALAAQPALANAFVTLHGDLGTGKTT CCCCCCCCCCEECCCCHHHHHHHHCCCCHHHHHHHHHHCCCCHHEEEEEEECCCCCCHHH FVRHLLRALGVQGRIKSPTYAVVEPHDTDAGPAWHFDFYRFGDPREWEDAGFRDIFAGPG HHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCEEEECEEECCCCCCCCCCCCEEHHCCCC LKLAEWPEKAAGLLPTADLVLQIEAPSPANGAYDGDGTARLALLRAGTPLGRTLVQALPA CCHHHCCHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHCC A C >Mature Secondary Structure TAARHHPGIVESTSGTDTLRRVWRSEDDTAAFARALAAQPALANAFVTLHGDLGTGKTT CCCCCCCCCEECCCCHHHHHHHHCCCCHHHHHHHHHHCCCCHHEEEEEEECCCCCCHHH FVRHLLRALGVQGRIKSPTYAVVEPHDTDAGPAWHFDFYRFGDPREWEDAGFRDIFAGPG HHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCEEEECEEECCCCCCCCCCCCEEHHCCCC LKLAEWPEKAAGLLPTADLVLQIEAPSPANGAYDGDGTARLALLRAGTPLGRTLVQALPA CCHHHCCHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHCC A C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP [C]
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023 [H]