Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is mutL [H]
Identifier: 120609987
GI number: 120609987
Start: 1426960
End: 1429056
Strand: Reverse
Name: mutL [H]
Synonym: Aave_1300
Alternate gene names: 120609987
Gene position: 1429056-1426960 (Counterclockwise)
Preceding gene: 120609989
Following gene: 120609986
Centisome position: 26.7
GC content: 73.3
Gene sequence:
>2097_bases ATGACCCCAGAGCCAGCCCTCCCGCGCCGCCCGATCCGCGATCTTCCGGACGAACTGATCAGCCAGATCGCCGCGGGCGA AGTGGTGGAGCGGCCCGCGTCGGCCGTGCGCGAACTCGTGGACAACGCGCTGGATGCAGGCGCCCGGCAGATCACCGTGC GGCTGCTGGCCGGCGGCGTCCGCCTGATCGCGGTGGAGGACGACGGCTGCGGCATCCCGCCCGAGGAACTGCCGGTGGCG CTGCGCCGCCACGCGACCAGCAAGATCACCAATCTGCACGACCTGGAGTCGGTGGCGACCATGGGCTTTCGCGGCGAGGC GCTGGCCGCCATCGCGTCGGTCTCGGAGATGGCCCTGCTGTCGCGGACCGAGGAGCAGCCCACGGCCTTCCTGCTCGACG CGCGCAGCGGCGAGCTGCGCCCCGCGGCGCGCGCACGCGGCACCACGGTGGAAGTGAAGGAGCTGTTCTTCTCCACACCC GCGCGGCGCAAGTTCCTGAAGACCGATGCGACGGAACTGGCGCATTGCATCGAGGCCGTGCGCCGCCACGCGCTGGCGCG GCCGGACGTCGGGTTCGCGATCTGGCACGAAGGCAAGCTGGTCGAGCAATGGCGCGCGGCGCTCGTCCCCCCCGCGGCCT CGGCGGACGGCACCGTGGACGATGCGGCGCTGGAGGAGGCGCTGGCGCGCCGTCTGTCCGACGTGCTGGGCGAGGACTTC CTGGCCGAATCGATCGCCGTGCGGCACCGCTCCGGGCCGGTGACGGTCACCGGGAGGGCCGGGCTGCCGGACGCCGCGCG CTCGCGCGCCGATCAGCAGTTCTGCTACGTCAACGGCCGGTTCGTGCGCGACAAGGTGCTCACGCATGCGGCCCGCAGCG CCTACGAGGACGTGCTGCACGGGCAGAAGCAGCCGGTGTATGCGCTCTATGTGGCGATCGATCCCATGCGGGTGGACGTG AACGTGCACCCCACCAAGATCGAGGTGCGCTTCCGCGACAGCCGCGAAGTCCACCAGGCCGTGCGGCATGCGGTGGAGAA CGCCCTGGCGGCCCCCCGCGCGCAAGCGCTGGCGGCCGCCGCGCAAGGCGCTGCCGAAGCGGGCGCGCCCGCCACGGATT CGCCGGCGCCTCCCACTGCCCGCGTGGCGCCGCCCGCCGCCCTGCCCCGGCAGGCCGCGATGCATTTCGATGCCCGCCCC GGGCACCGCGTCACCGACCTGGAAGCGCTCTGGGGCCGCAAGGACACCGCGCCCTCCACACGGCCTGACGGCACCACGGA CTTCGCGCCGCCCCCTGCACCGCATGCGCCGCTGTCTTCCGCCGCTGCACCGGGGGGGGCCGCCACCGTGCAGGAGGCTT CCCCGGCCTATGCCCCGGCCGGCGGTGCCCTGCCGGCCGTGGATACGCCCGCGGCCCCGCAGGGAGGCGCGCCGGACGGC CCTGGCGCCTTCGCGGCAGTGCCCGACGCCCCTGCGCAGGCCGCGGCACCTTCCAGTGCCGAGCCGGCAGTCTGGCCGCT GGGGCGCGCGGTGGCCCAGATCCACGGCGTATACATCCTGGCCGAGAATGCCCAGGGCATGGTGATCGTGGACATGCACG CGGCGCACGAGCGCATCGTGTACGAGCGCCTCAAGGCCCAGGTGGACGCCAGCGAGCGCATCGCGAGCCAGCCGCTGCTG ATTCCCGCGACATTCGCCGCCACGCCCGAGGAAGTGGCCACGGCGGAAGCCCATGCCGACACGCTCGACATGCTCGGCCT CGAAGTCTCGCCCTTCTCGCCCCGCACGCTGGCGGTGCGCGCCGTGCCCACCTCGCTCGCGCAGGGCGATGCGGTGGAAC TGGCGCGCAGCGTGCTCGCGGAGCTGGCGGCGCACGATGCCACCACCGTGGTGCAGCGGGCCCGCAACGAGATCCTGGGC ACCATGGCCTGCCACGGCGCGGTGCGCGCGCACCGGCGGCTGACGCTGGACGAGATGAACGCGCTGCTGCGACAGATGGA AGTGACGGAACGCTCCGACCAATGCAACCATGGCCGGCCCACGTGGCGGCAACTGTCGATGCGCGAACTGGACGCGCTGT TCCTGCGCGGACGCTGA
Upstream 100 bases:
>100_bases AGGGGTCGGAGGCACGGGCAGGTGCTTTCGCCCCGCGAAGGGGGCGGGCACCCGGCGGCGCGGCGCGTAACTCTAACCGC ACTGCCTACAATGCCGCCCG
Downstream 100 bases:
>100_bases CACCCCTTCGAAGGACCTCTCCATGCCGCTCCACCGCGTTCCGCTCCGCCACCGCTTCTACCGGACATCCACGGTGCGCG GCCTCATGGCCCTGGCCGCC
Product: DNA mismatch repair protein MutL
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 698; Mature: 697
Protein sequence:
>698_residues MTPEPALPRRPIRDLPDELISQIAAGEVVERPASAVRELVDNALDAGARQITVRLLAGGVRLIAVEDDGCGIPPEELPVA LRRHATSKITNLHDLESVATMGFRGEALAAIASVSEMALLSRTEEQPTAFLLDARSGELRPAARARGTTVEVKELFFSTP ARRKFLKTDATELAHCIEAVRRHALARPDVGFAIWHEGKLVEQWRAALVPPAASADGTVDDAALEEALARRLSDVLGEDF LAESIAVRHRSGPVTVTGRAGLPDAARSRADQQFCYVNGRFVRDKVLTHAARSAYEDVLHGQKQPVYALYVAIDPMRVDV NVHPTKIEVRFRDSREVHQAVRHAVENALAAPRAQALAAAAQGAAEAGAPATDSPAPPTARVAPPAALPRQAAMHFDARP GHRVTDLEALWGRKDTAPSTRPDGTTDFAPPPAPHAPLSSAAAPGGAATVQEASPAYAPAGGALPAVDTPAAPQGGAPDG PGAFAAVPDAPAQAAAPSSAEPAVWPLGRAVAQIHGVYILAENAQGMVIVDMHAAHERIVYERLKAQVDASERIASQPLL IPATFAATPEEVATAEAHADTLDMLGLEVSPFSPRTLAVRAVPTSLAQGDAVELARSVLAELAAHDATTVVQRARNEILG TMACHGAVRAHRRLTLDEMNALLRQMEVTERSDQCNHGRPTWRQLSMRELDALFLRGR
Sequences:
>Translated_698_residues MTPEPALPRRPIRDLPDELISQIAAGEVVERPASAVRELVDNALDAGARQITVRLLAGGVRLIAVEDDGCGIPPEELPVA LRRHATSKITNLHDLESVATMGFRGEALAAIASVSEMALLSRTEEQPTAFLLDARSGELRPAARARGTTVEVKELFFSTP ARRKFLKTDATELAHCIEAVRRHALARPDVGFAIWHEGKLVEQWRAALVPPAASADGTVDDAALEEALARRLSDVLGEDF LAESIAVRHRSGPVTVTGRAGLPDAARSRADQQFCYVNGRFVRDKVLTHAARSAYEDVLHGQKQPVYALYVAIDPMRVDV NVHPTKIEVRFRDSREVHQAVRHAVENALAAPRAQALAAAAQGAAEAGAPATDSPAPPTARVAPPAALPRQAAMHFDARP GHRVTDLEALWGRKDTAPSTRPDGTTDFAPPPAPHAPLSSAAAPGGAATVQEASPAYAPAGGALPAVDTPAAPQGGAPDG PGAFAAVPDAPAQAAAPSSAEPAVWPLGRAVAQIHGVYILAENAQGMVIVDMHAAHERIVYERLKAQVDASERIASQPLL IPATFAATPEEVATAEAHADTLDMLGLEVSPFSPRTLAVRAVPTSLAQGDAVELARSVLAELAAHDATTVVQRARNEILG TMACHGAVRAHRRLTLDEMNALLRQMEVTERSDQCNHGRPTWRQLSMRELDALFLRGR >Mature_697_residues TPEPALPRRPIRDLPDELISQIAAGEVVERPASAVRELVDNALDAGARQITVRLLAGGVRLIAVEDDGCGIPPEELPVAL RRHATSKITNLHDLESVATMGFRGEALAAIASVSEMALLSRTEEQPTAFLLDARSGELRPAARARGTTVEVKELFFSTPA RRKFLKTDATELAHCIEAVRRHALARPDVGFAIWHEGKLVEQWRAALVPPAASADGTVDDAALEEALARRLSDVLGEDFL AESIAVRHRSGPVTVTGRAGLPDAARSRADQQFCYVNGRFVRDKVLTHAARSAYEDVLHGQKQPVYALYVAIDPMRVDVN VHPTKIEVRFRDSREVHQAVRHAVENALAAPRAQALAAAAQGAAEAGAPATDSPAPPTARVAPPAALPRQAAMHFDARPG HRVTDLEALWGRKDTAPSTRPDGTTDFAPPPAPHAPLSSAAAPGGAATVQEASPAYAPAGGALPAVDTPAAPQGGAPDGP GAFAAVPDAPAQAAAPSSAEPAVWPLGRAVAQIHGVYILAENAQGMVIVDMHAAHERIVYERLKAQVDASERIASQPLLI PATFAATPEEVATAEAHADTLDMLGLEVSPFSPRTLAVRAVPTSLAQGDAVELARSVLAELAAHDATTVVQRARNEILGT MACHGAVRAHRRLTLDEMNALLRQMEVTERSDQCNHGRPTWRQLSMRELDALFLRGR
Specific function: This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a "molecular matchmaker", a protein that promotes the formation of a stable complex between two or more DNA-bindi
COG id: COG0323
COG function: function code L; DNA mismatch repair enzyme (predicted ATPase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DNA mismatch repair mutL/hexB family [H]
Homologues:
Organism=Homo sapiens, GI4557757, Length=343, Percent_Identity=32.0699708454811, Blast_Score=186, Evalue=9e-47, Organism=Homo sapiens, GI4505913, Length=342, Percent_Identity=28.0701754385965, Blast_Score=129, Evalue=1e-29, Organism=Homo sapiens, GI310128478, Length=346, Percent_Identity=28.9017341040462, Blast_Score=128, Evalue=2e-29, Organism=Homo sapiens, GI4505911, Length=360, Percent_Identity=26.6666666666667, Blast_Score=122, Evalue=9e-28, Organism=Homo sapiens, GI189458898, Length=360, Percent_Identity=27.2222222222222, Blast_Score=122, Evalue=1e-27, Organism=Homo sapiens, GI189458896, Length=193, Percent_Identity=32.1243523316062, Blast_Score=108, Evalue=2e-23, Organism=Homo sapiens, GI263191589, Length=254, Percent_Identity=27.9527559055118, Blast_Score=93, Evalue=1e-18, Organism=Homo sapiens, GI310128480, Length=295, Percent_Identity=27.1186440677966, Blast_Score=92, Evalue=2e-18, Organism=Homo sapiens, GI91992160, Length=376, Percent_Identity=23.4042553191489, Blast_Score=79, Evalue=2e-14, Organism=Homo sapiens, GI91992162, Length=376, Percent_Identity=23.4042553191489, Blast_Score=79, Evalue=2e-14, Organism=Escherichia coli, GI1790612, Length=626, Percent_Identity=37.0607028753994, Blast_Score=323, Evalue=3e-89, Organism=Caenorhabditis elegans, GI71991825, Length=342, Percent_Identity=33.6257309941521, Blast_Score=168, Evalue=1e-41, Organism=Caenorhabditis elegans, GI17562796, Length=359, Percent_Identity=26.1838440111421, Blast_Score=130, Evalue=2e-30, Organism=Saccharomyces cerevisiae, GI6323819, Length=373, Percent_Identity=28.686327077748, Blast_Score=173, Evalue=1e-43, Organism=Saccharomyces cerevisiae, GI6324247, Length=347, Percent_Identity=27.6657060518732, Blast_Score=126, Evalue=1e-29, Organism=Saccharomyces cerevisiae, GI6325093, Length=316, Percent_Identity=24.6835443037975, Blast_Score=83, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6323063, Length=365, Percent_Identity=23.5616438356164, Blast_Score=79, Evalue=2e-15, Organism=Drosophila melanogaster, GI17136968, Length=380, Percent_Identity=30.5263157894737, Blast_Score=184, Evalue=2e-46, Organism=Drosophila melanogaster, GI17136970, Length=373, Percent_Identity=26.8096514745308, Blast_Score=107, Evalue=2e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR002099 - InterPro: IPR013507 - InterPro: IPR014762 - InterPro: IPR020667 - InterPro: IPR014763 - InterPro: IPR014790 - InterPro: IPR020568 - InterPro: IPR014721 [H]
Pfam domain/function: PF01119 DNA_mis_repair; PF02518 HATPase_c; PF08676 MutL_C [H]
EC number: NA
Molecular weight: Translated: 74124; Mature: 73992
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: PS00058 DNA_MISMATCH_REPAIR_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPEPALPRRPIRDLPDELISQIAAGEVVERPASAVRELVDNALDAGARQITVRLLAGGV CCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEHEEEECCE RLIAVEDDGCGIPPEELPVALRRHATSKITNLHDLESVATMGFRGEALAAIASVSEMALL EEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH SRTEEQPTAFLLDARSGELRPAARARGTTVEVKELFFSTPARRKFLKTDATELAHCIEAV HCCCCCCCEEEEECCCCCCCCHHHHCCCEEHHHHHHHCCHHHHHHHHCCHHHHHHHHHHH RRHALARPDVGFAIWHEGKLVEQWRAALVPPAASADGTVDDAALEEALARRLSDVLGEDF HHHHCCCCCCCEEEECCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH LAESIAVRHRSGPVTVTGRAGLPDAARSRADQQFCYVNGRFVRDKVLTHAARSAYEDVLH HHHHHHHHCCCCCEEEECCCCCCHHHHHCCCCCEEEECCEEHHHHHHHHHHHHHHHHHHC GQKQPVYALYVAIDPMRVDVNVHPTKIEVRFRDSREVHQAVRHAVENALAAPRAQALAAA CCCCCEEEEEEEECCEEEEEEECCCEEEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHH AQGAAEAGAPATDSPAPPTARVAPPAALPRQAAMHFDARPGHRVTDLEALWGRKDTAPST HHCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCC RPDGTTDFAPPPAPHAPLSSAAAPGGAATVQEASPAYAPAGGALPAVDTPAAPQGGAPDG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PGAFAAVPDAPAQAAAPSSAEPAVWPLGRAVAQIHGVYILAENAQGMVIVDMHAAHERIV CCCEEECCCCCCHHCCCCCCCCCCCHHHHHHHHHCCEEEEEECCCCEEEEECHHHHHHHH YERLKAQVDASERIASQPLLIPATFAATPEEVATAEAHADTLDMLGLEVSPFSPRTLAVR HHHHHHHCCHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEE AVPTSLAQGDAVELARSVLAELAAHDATTVVQRARNEILGTMACHGAVRAHRRLTLDEMN ECCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH ALLRQMEVTERSDQCNHGRPTWRQLSMRELDALFLRGR HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TPEPALPRRPIRDLPDELISQIAAGEVVERPASAVRELVDNALDAGARQITVRLLAGGV CCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEHEEEECCE RLIAVEDDGCGIPPEELPVALRRHATSKITNLHDLESVATMGFRGEALAAIASVSEMALL EEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH SRTEEQPTAFLLDARSGELRPAARARGTTVEVKELFFSTPARRKFLKTDATELAHCIEAV HCCCCCCCEEEEECCCCCCCCHHHHCCCEEHHHHHHHCCHHHHHHHHCCHHHHHHHHHHH RRHALARPDVGFAIWHEGKLVEQWRAALVPPAASADGTVDDAALEEALARRLSDVLGEDF HHHHCCCCCCCEEEECCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH LAESIAVRHRSGPVTVTGRAGLPDAARSRADQQFCYVNGRFVRDKVLTHAARSAYEDVLH HHHHHHHHCCCCCEEEECCCCCCHHHHHCCCCCEEEECCEEHHHHHHHHHHHHHHHHHHC GQKQPVYALYVAIDPMRVDVNVHPTKIEVRFRDSREVHQAVRHAVENALAAPRAQALAAA CCCCCEEEEEEEECCEEEEEEECCCEEEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHH AQGAAEAGAPATDSPAPPTARVAPPAALPRQAAMHFDARPGHRVTDLEALWGRKDTAPST HHCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCC RPDGTTDFAPPPAPHAPLSSAAAPGGAATVQEASPAYAPAGGALPAVDTPAAPQGGAPDG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PGAFAAVPDAPAQAAAPSSAEPAVWPLGRAVAQIHGVYILAENAQGMVIVDMHAAHERIV CCCEEECCCCCCHHCCCCCCCCCCCHHHHHHHHHCCEEEEEECCCCEEEEECHHHHHHHH YERLKAQVDASERIASQPLLIPATFAATPEEVATAEAHADTLDMLGLEVSPFSPRTLAVR HHHHHHHCCHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEE AVPTSLAQGDAVELARSVLAELAAHDATTVVQRARNEILGTMACHGAVRAHRRLTLDEMN ECCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH ALLRQMEVTERSDQCNHGRPTWRQLSMRELDALFLRGR HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11823852 [H]