Click here to switch to the map view.

The map label for this gene is glpQ [H]

Identifier: 120609985

GI number: 120609985

Start: 1425024

End: 1426223

Strand: Direct

Name: glpQ [H]

Synonym: Aave_1298

Alternate gene names: 120609985

Gene position: 1425024-1426223 (Clockwise)

Preceding gene: 120609983

Following gene: 120609988

Centisome position: 26.62

GC content: 69.42

Gene sequence:

>1200_bases
ATGACGACGCAACGAATCGCGGGCGGCCCGGCCGCCGCTCTGGTGTCCGCCGGCCGCACGGTCCTGGCCGCCGCCGCGTG
CGCAGCCCTGTCCGCCTGCGGCGGCGACGGCGGCACCCATCCGACCCTCGACGGCTCCAAGGCCCTGGTGATCGGCCACC
GCGGCGCCGCCGGCTACCTGCCCGACCATACGCTCGAAGGCTACCGCCGCGGCATCGAACTGGGCGCCGACTTCATCGAG
CCGGACCTGGTGGCGACCAAAGACGGCGTGCTCATCGCCCGCCACGAGCCCAACATCACCGGCACGACCGACGTGTCGCA
GCGCCCCGAGTTCGCCAGCCGCAAGACCCGCAAGATGGTGGACGGCGTGCAGGAGGAGGGCTGGTTCGCCTCCGATTTCA
CCCTGGCCGAGATCAAGACCCTGCGCGCCATCCAGCCCCTGGCCGAGCGCGACCAGTCCTTCAACGGCCGCTTCCAGGTC
CCCACGCTCACCGAGGTGCTGGACCTCGCCCGCGCCGAAGGAGCGAAGGCGGGCCGCACCGTGGGCGTCTATATCGAGAC
CAAGCATCCCACCTACCACGCCAACCTGAACCTGAAGCTCGAAGACCGGCTGCTCGACACGCTCGCGCAGTACGGCTACA
CGAAGGCGGCCTCGCCGGTCATGGTGCAGTCCTTCGAGGTGTCCAACCTCAAGTACCTGCGCACGAAGACCCAGGTGCGC
CTCGTGCAGCTCGTGGACGGCAACGACGTGAAACCCGACGGCAGCATCGATCTGACCGCCCCCTACGACAAGCCCTACGA
CTTCGCGGTGGCCGGCGACCGACGCACCTTCGCCAGCCTGCTCACGCCCGAGGGGCTGCGCGAGGTCAGGACCTATGCCG
ACGGCATCGGCCCCTGGAAGCCCTACCTCATTCCGACGCGGCTCCAGGACGCCAACAACGACGGCAAGCCGGACGATCTC
AACGGCGACGGCGTCATCGACGAGCGCGACCGCATCGTGATGTCGCCCACCCGCGTGGTGGCCGACGCCCATGCGGCCGG
CCTGTTCGTGCACCCCTACACGTTCCGCAGCGAGGCCAAGCGGCTCGCCTCCGACTACCGTGGCGATCCCAAGGCCGAGT
ACCGGCAGTTCTATCGCCTGGGGGTGGACGGCGTGTTCTCGGACTTTCCCGACCAGGCCAAGGCTGCCCGCGACGACTGA

Upstream 100 bases:

>100_bases
GCGCGTCCGGAGGAGGGGCGGCGGTGTCACGGGGCTGTCATGCGGTACCGACAGAGTGCGCGCGGACGCATACCGTCCAT
TCACAACGGAGAAGAGATCC

Downstream 100 bases:

>100_bases
TCCCCGCCGTGCGGGCGGCGCTCAGAAGCTGTACTTGACGCCCAGGCTCAGCAGGGTTCGCCCCTGGCGGCGCCCCACGA
TGCCGTCGAGCTGCCAGCCG

Product: glycerophosphoryl diester phosphodiesterase

Products: NA

Alternate protein names: Glycerophosphodiester phosphodiesterase [H]

Number of amino acids: Translated: 399; Mature: 398

Protein sequence:

>399_residues
MTTQRIAGGPAAALVSAGRTVLAAAACAALSACGGDGGTHPTLDGSKALVIGHRGAAGYLPDHTLEGYRRGIELGADFIE
PDLVATKDGVLIARHEPNITGTTDVSQRPEFASRKTRKMVDGVQEEGWFASDFTLAEIKTLRAIQPLAERDQSFNGRFQV
PTLTEVLDLARAEGAKAGRTVGVYIETKHPTYHANLNLKLEDRLLDTLAQYGYTKAASPVMVQSFEVSNLKYLRTKTQVR
LVQLVDGNDVKPDGSIDLTAPYDKPYDFAVAGDRRTFASLLTPEGLREVRTYADGIGPWKPYLIPTRLQDANNDGKPDDL
NGDGVIDERDRIVMSPTRVVADAHAAGLFVHPYTFRSEAKRLASDYRGDPKAEYRQFYRLGVDGVFSDFPDQAKAARDD

Sequences:

>Translated_399_residues
MTTQRIAGGPAAALVSAGRTVLAAAACAALSACGGDGGTHPTLDGSKALVIGHRGAAGYLPDHTLEGYRRGIELGADFIE
PDLVATKDGVLIARHEPNITGTTDVSQRPEFASRKTRKMVDGVQEEGWFASDFTLAEIKTLRAIQPLAERDQSFNGRFQV
PTLTEVLDLARAEGAKAGRTVGVYIETKHPTYHANLNLKLEDRLLDTLAQYGYTKAASPVMVQSFEVSNLKYLRTKTQVR
LVQLVDGNDVKPDGSIDLTAPYDKPYDFAVAGDRRTFASLLTPEGLREVRTYADGIGPWKPYLIPTRLQDANNDGKPDDL
NGDGVIDERDRIVMSPTRVVADAHAAGLFVHPYTFRSEAKRLASDYRGDPKAEYRQFYRLGVDGVFSDFPDQAKAARDD
>Mature_398_residues
TTQRIAGGPAAALVSAGRTVLAAAACAALSACGGDGGTHPTLDGSKALVIGHRGAAGYLPDHTLEGYRRGIELGADFIEP
DLVATKDGVLIARHEPNITGTTDVSQRPEFASRKTRKMVDGVQEEGWFASDFTLAEIKTLRAIQPLAERDQSFNGRFQVP
TLTEVLDLARAEGAKAGRTVGVYIETKHPTYHANLNLKLEDRLLDTLAQYGYTKAASPVMVQSFEVSNLKYLRTKTQVRL
VQLVDGNDVKPDGSIDLTAPYDKPYDFAVAGDRRTFASLLTPEGLREVRTYADGIGPWKPYLIPTRLQDANNDGKPDDLN
GDGVIDERDRIVMSPTRVVADAHAAGLFVHPYTFRSEAKRLASDYRGDPKAEYRQFYRLGVDGVFSDFPDQAKAARDD

Specific function: Glycerophosphoryl diester phosphodiesterase hydrolyzes deacylated phospholipids to G3P and the corresponding alcohols [H]

COG id: COG0584

COG function: function code C; Glycerophosphoryl diester phosphodiesterase

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycerophosphoryl diester phosphodiesterase family [H]

Homologues:

Organism=Escherichia coli, GI1788572, Length=400, Percent_Identity=30, Blast_Score=155, Evalue=3e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004129
- InterPro:   IPR017946 [H]

Pfam domain/function: PF03009 GDPD [H]

EC number: =3.1.4.46 [H]

Molecular weight: Translated: 43455; Mature: 43324

Theoretical pI: Translated: 6.13; Mature: 6.13

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTQRIAGGPAAALVSAGRTVLAAAACAALSACGGDGGTHPTLDGSKALVIGHRGAAGYL
CCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCC
PDHTLEGYRRGIELGADFIEPDLVATKDGVLIARHEPNITGTTDVSQRPEFASRKTRKMV
CCHHHHHHHHHHHHCHHHCCCCCEECCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHH
DGVQEEGWFASDFTLAEIKTLRAIQPLAERDQSFNGRFQVPTLTEVLDLARAEGAKAGRT
HCHHHCCEEECCCHHHHHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHCCCCCCCE
VGVYIETKHPTYHANLNLKLEDRLLDTLAQYGYTKAASPVMVQSFEVSNLKYLRTKTQVR
EEEEEEECCCEEEEEEEEEEHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHCEEE
LVQLVDGNDVKPDGSIDLTAPYDKPYDFAVAGDRRTFASLLTPEGLREVRTYADGIGPWK
EEEEECCCCCCCCCCEEEECCCCCCCCEEEECCHHHHHHHHCHHHHHHHHHHHCCCCCCC
PYLIPTRLQDANNDGKPDDLNGDGVIDERDRIVMSPTRVVADAHAAGLFVHPYTFRSEAK
CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHCEEEEECCHHHHHHH
RLASDYRGDPKAEYRQFYRLGVDGVFSDFPDQAKAARDD
HHHHHCCCCCHHHHHHHHHHCCCHHHHCCCCHHHHCCCC
>Mature Secondary Structure 
TTQRIAGGPAAALVSAGRTVLAAAACAALSACGGDGGTHPTLDGSKALVIGHRGAAGYL
CCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCC
PDHTLEGYRRGIELGADFIEPDLVATKDGVLIARHEPNITGTTDVSQRPEFASRKTRKMV
CCHHHHHHHHHHHHCHHHCCCCCEECCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHH
DGVQEEGWFASDFTLAEIKTLRAIQPLAERDQSFNGRFQVPTLTEVLDLARAEGAKAGRT
HCHHHCCEEECCCHHHHHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHCCCCCCCE
VGVYIETKHPTYHANLNLKLEDRLLDTLAQYGYTKAASPVMVQSFEVSNLKYLRTKTQVR
EEEEEEECCCEEEEEEEEEEHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHCEEE
LVQLVDGNDVKPDGSIDLTAPYDKPYDFAVAGDRRTFASLLTPEGLREVRTYADGIGPWK
EEEEECCCCCCCCCCEEEECCCCCCCCEEEECCHHHHHHHHCHHHHHHHHHHHCCCCCCC
PYLIPTRLQDANNDGKPDDLNGDGVIDERDRIVMSPTRVVADAHAAGLFVHPYTFRSEAK
CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHCEEEEECCHHHHHHH
RLASDYRGDPKAEYRQFYRLGVDGVFSDFPDQAKAARDD
HHHHHCCCCCHHHHHHHHHHCCCHHHHCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1851953; 9205837; 9278503; 3329281; 8899705 [H]