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The map label for this gene is hspC2 [H]

Identifier: 120609979

GI number: 120609979

Start: 1420084

End: 1420596

Strand: Direct

Name: hspC2 [H]

Synonym: Aave_1292

Alternate gene names: 120609979

Gene position: 1420084-1420596 (Clockwise)

Preceding gene: 120609972

Following gene: 120609983

Centisome position: 26.53

GC content: 65.11

Gene sequence:

>513_bases
ATGGCCGCAGGCCTATATGGGCAGTGCGGCCGGCATGCCGGCCCGTTTCCAACCCCGATGTTCGACACGACGAAGGAGCT
CATCATGAATTCACTCGTGACCCGTGGCGGTCTTCTGGACGAATTTTTCAAGGACTTCGCGCCCGGTTTCTACGTGCGCC
CCCTGCACGGCGACGGCCTGCCCACGCCGCAGCAGATCAAGGTGGACGTCAAGGAAAACGACGGCGGCTATACCGTGCAC
GCCGAGATTCCCGGCGTGCCCAAGGAGGACATCCACGTCTCGCTCGACGGCAACGTCGTGAGCCTGCGCGCCGAGGTGCG
GCAGCACGACCAGCAGACCGAAGGCGACAAGGTGCTGCGCTCGGAGCGCTACTACGGCGCGGTGGCCCGCTCTTTCCAGT
TGCCGGCCGAGATCGACACGCAGGAAGCGAAGGCGAAATACGACCATGGCGTGCTCACGCTGACGCTGCCCAAGAAGCGC
GGCACCGGCGGGCAGCGGCTCGCGATCGAATAG

Upstream 100 bases:

>100_bases
AGTTCCTGCCAGGAAAAGGTGCGGAGCAAGGCGAGCATGGAGCGATTGTGGCGCCGCCGTCACGGCCCGTGCCGGGAGGC
CGCACGGGGTCTTGAAGCGC

Downstream 100 bases:

>100_bases
GGCGGTCCAGGGCGGTTCAGCCGACCGCGATGCCCTCCGGCCGGATGCCGTCCGCGGTCAGGCGCAGCGTGCGGTCGGCG
CGCTGCGCCGCGGCCAGCGA

Product: heat shock protein Hsp20

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 170; Mature: 169

Protein sequence:

>170_residues
MAAGLYGQCGRHAGPFPTPMFDTTKELIMNSLVTRGGLLDEFFKDFAPGFYVRPLHGDGLPTPQQIKVDVKENDGGYTVH
AEIPGVPKEDIHVSLDGNVVSLRAEVRQHDQQTEGDKVLRSERYYGAVARSFQLPAEIDTQEAKAKYDHGVLTLTLPKKR
GTGGQRLAIE

Sequences:

>Translated_170_residues
MAAGLYGQCGRHAGPFPTPMFDTTKELIMNSLVTRGGLLDEFFKDFAPGFYVRPLHGDGLPTPQQIKVDVKENDGGYTVH
AEIPGVPKEDIHVSLDGNVVSLRAEVRQHDQQTEGDKVLRSERYYGAVARSFQLPAEIDTQEAKAKYDHGVLTLTLPKKR
GTGGQRLAIE
>Mature_169_residues
AAGLYGQCGRHAGPFPTPMFDTTKELIMNSLVTRGGLLDEFFKDFAPGFYVRPLHGDGLPTPQQIKVDVKENDGGYTVHA
EIPGVPKEDIHVSLDGNVVSLRAEVRQHDQQTEGDKVLRSERYYGAVARSFQLPAEIDTQEAKAKYDHGVLTLTLPKKRG
TGGQRLAIE

Specific function: Unknown

COG id: COG0071

COG function: function code O; Molecular chaperone (small heat shock protein)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the small heat shock protein (HSP20) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002068
- InterPro:   IPR008978 [H]

Pfam domain/function: PF00011 HSP20 [H]

EC number: NA

Molecular weight: Translated: 18705; Mature: 18574

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS01031 HSP20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAGLYGQCGRHAGPFPTPMFDTTKELIMNSLVTRGGLLDEFFKDFAPGFYVRPLHGDGL
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEEECCCCC
PTPQQIKVDVKENDGGYTVHAEIPGVPKEDIHVSLDGNVVSLRAEVRQHDQQTEGDKVLR
CCCCEEEEEEEECCCCEEEEEECCCCCCCCEEEEECCCEEEEEHHHHHCCCCCCHHHHHH
SERYYGAVARSFQLPAEIDTQEAKAKYDHGVLTLTLPKKRGTGGQRLAIE
HHHHHHHHHHCCCCCCCCCCHHHHHHCCCCEEEEEECCCCCCCCCEEEEC
>Mature Secondary Structure 
AAGLYGQCGRHAGPFPTPMFDTTKELIMNSLVTRGGLLDEFFKDFAPGFYVRPLHGDGL
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEEECCCCC
PTPQQIKVDVKENDGGYTVHAEIPGVPKEDIHVSLDGNVVSLRAEVRQHDQQTEGDKVLR
CCCCEEEEEEEECCCCEEEEEECCCCCCCCEEEEECCCEEEEEHHHHHCCCCCCHHHHHH
SERYYGAVARSFQLPAEIDTQEAKAKYDHGVLTLTLPKKRGTGGQRLAIE
HHHHHHHHHHCCCCCCCCCCHHHHHHCCCCEEEEEECCCCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA