Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120609975
Identifier: 120609975
GI number: 120609975
Start: 1414348
End: 1415487
Strand: Reverse
Name: 120609975
Synonym: Aave_1288
Alternate gene names: NA
Gene position: 1415487-1414348 (Counterclockwise)
Preceding gene: 120609976
Following gene: 120609974
Centisome position: 26.44
GC content: 71.14
Gene sequence:
>1140_bases GTGGCGCGAAATGGCGCGCCGCTCCCGCGCAAGCGGGCAGCTGCCCAACCGCGTCCGGATGTCGTGAGCCGCCCCCGCAT CTGCCTCAACATGATCGTGAAGAACGAGGCGCCGGTGATCACCCGGTGCCTCGCTTCCGTGCGGCCCTTCATCGACCACT GGGTGATCGTGGACACGGGCTCCACGGACGGCACGCAGGACATCGTGCGCGATTTCCTGCGGGGCGTGCCTGGCAGCCTG CACGAGCGGCCCTGGAGAAACTTCGCGCACAACCGCAACGAGGCGCTGGAGCTCGCCCGGCCGCAGGCGGACTACGTGCT CTTCATCGACGCGGACGAGCAGTTGCGCGTGCCCGAGGGGTTCGCCTGGCCCGCGCTGTCCGCGGACGGCTACATGTTCA CCTGCCGCATGGGCGACTGCGAGTACCTGCGCAATGCCATGATCGCCGCGCGCGTGCCCTGGCGCTGGGAGGGCGTGCTG CACGAGTTCCTGGCCGCGCCCGCGCACGCGCCCTGGCAGCCGCTGCCCGGCCCGGTGATCGATGTATCGCACGACGGCGC CCGTGCCCGCGATCCGCAGACCTACCTGCGCGACATCGCCGTGCTCGAACAGGCGCTGCGGGATGAACCCGGCAACACGC GCTATGCGTTCTACCTGGCCCAGAGCCTGCGGGACGCGGGCCGGCTGCAGGAGTCGCGCGAAGCCTACCGCCGGCGCGCG GCGATGGGCGGCTGGGACGAGGAATGCTGGTTCGCGGTCTTCCAGGTGGCTGTGCTCACCGAACGCCTGGACGGCCCGCC GCACGAGGTGCGGGAGGCGTACCTCGCGGCCTACGCGCAGCGGCCGGCGCGCGCGGAACCCCTGTGCGAGCTGGCCCGCT ACCACCGGCTGCGGTCGGAGTTCGCGCTGGCCCATCTCTACGCCCAGCAGGCGGCGCGCATGCCGCGGCCCGCGGACATC CTGTTCGTGGATGCCGGCGTCTATGCATGGCGCTCGCTCGACGAACTCGCCGTGAGCGCGTTCTATGTGCAGGCCTTCGA GCAGGGCCGCGAGGCACTGCAGAAGCTGCTGCGCGAGCGGCGCTTTCCTGCCTCCGAGACCGCGCGCATCGAGGCCAACC GGCCCTTCTTCGGGCTATAG
Upstream 100 bases:
>100_bases ACCCAGACCTACAAGAGTTCGGACAACCAATGGAAATGTTCGTACTCCTGCTCATCCGCGGTAAGCATCACGGCGGAGGC GTACTGCCAATAATGCACCG
Downstream 100 bases:
>100_bases GGCAGATGCGAACCGGCTCGCATGGCGGCCGCGCGCCTGCGATACTTCCCGCATGACCGCACTCCCCTCCTCCGGCGCCG CGCCCGGCGGCTGGCTGCAC
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: Glycosyl Transferase Group 2 Family Protein; Glycosyltransferase; Glycosyl Transferase; Beta 1 4 Glucosyltransferase; Glycosyltransferase Involved In Cell Wall Biogenesis; TPR-Like Glycosyl Transferase Family 2 Protein; TPR Repeat-Containing Glycosyl Transferase; FkbM Family Methyltransferase; Family 2 Glycosyl Transferase
Number of amino acids: Translated: 379; Mature: 378
Protein sequence:
>379_residues MARNGAPLPRKRAAAQPRPDVVSRPRICLNMIVKNEAPVITRCLASVRPFIDHWVIVDTGSTDGTQDIVRDFLRGVPGSL HERPWRNFAHNRNEALELARPQADYVLFIDADEQLRVPEGFAWPALSADGYMFTCRMGDCEYLRNAMIAARVPWRWEGVL HEFLAAPAHAPWQPLPGPVIDVSHDGARARDPQTYLRDIAVLEQALRDEPGNTRYAFYLAQSLRDAGRLQESREAYRRRA AMGGWDEECWFAVFQVAVLTERLDGPPHEVREAYLAAYAQRPARAEPLCELARYHRLRSEFALAHLYAQQAARMPRPADI LFVDAGVYAWRSLDELAVSAFYVQAFEQGREALQKLLRERRFPASETARIEANRPFFGL
Sequences:
>Translated_379_residues MARNGAPLPRKRAAAQPRPDVVSRPRICLNMIVKNEAPVITRCLASVRPFIDHWVIVDTGSTDGTQDIVRDFLRGVPGSL HERPWRNFAHNRNEALELARPQADYVLFIDADEQLRVPEGFAWPALSADGYMFTCRMGDCEYLRNAMIAARVPWRWEGVL HEFLAAPAHAPWQPLPGPVIDVSHDGARARDPQTYLRDIAVLEQALRDEPGNTRYAFYLAQSLRDAGRLQESREAYRRRA AMGGWDEECWFAVFQVAVLTERLDGPPHEVREAYLAAYAQRPARAEPLCELARYHRLRSEFALAHLYAQQAARMPRPADI LFVDAGVYAWRSLDELAVSAFYVQAFEQGREALQKLLRERRFPASETARIEANRPFFGL >Mature_378_residues ARNGAPLPRKRAAAQPRPDVVSRPRICLNMIVKNEAPVITRCLASVRPFIDHWVIVDTGSTDGTQDIVRDFLRGVPGSLH ERPWRNFAHNRNEALELARPQADYVLFIDADEQLRVPEGFAWPALSADGYMFTCRMGDCEYLRNAMIAARVPWRWEGVLH EFLAAPAHAPWQPLPGPVIDVSHDGARARDPQTYLRDIAVLEQALRDEPGNTRYAFYLAQSLRDAGRLQESREAYRRRAA MGGWDEECWFAVFQVAVLTERLDGPPHEVREAYLAAYAQRPARAEPLCELARYHRLRSEFALAHLYAQQAARMPRPADIL FVDAGVYAWRSLDELAVSAFYVQAFEQGREALQKLLRERRFPASETARIEANRPFFGL
Specific function: Unknown
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43190; Mature: 43058
Theoretical pI: Translated: 7.56; Mature: 7.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARNGAPLPRKRAAAQPRPDVVSRPRICLNMIVKNEAPVITRCLASVRPFIDHWVIVDTG CCCCCCCCCHHHCCCCCCCCHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCEEEEECC STDGTQDIVRDFLRGVPGSLHERPWRNFAHNRNEALELARPQADYVLFIDADEQLRVPEG CCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHCCCCCCEEEEEECCCCCCCCCC FAWPALSADGYMFTCRMGDCEYLRNAMIAARVPWRWEGVLHEFLAAPAHAPWQPLPGPVI CCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCEE DVSHDGARARDPQTYLRDIAVLEQALRDEPGNTRYAFYLAQSLRDAGRLQESREAYRRRA ECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHH AMGGWDEECWFAVFQVAVLTERLDGPPHEVREAYLAAYAQRPARAEPLCELARYHRLRSE HCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH FALAHLYAQQAARMPRPADILFVDAGVYAWRSLDELAVSAFYVQAFEQGREALQKLLRER HHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RFPASETARIEANRPFFGL CCCCCCCCEEECCCCCCCC >Mature Secondary Structure ARNGAPLPRKRAAAQPRPDVVSRPRICLNMIVKNEAPVITRCLASVRPFIDHWVIVDTG CCCCCCCCHHHCCCCCCCCHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCEEEEECC STDGTQDIVRDFLRGVPGSLHERPWRNFAHNRNEALELARPQADYVLFIDADEQLRVPEG CCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHCCCCCCEEEEEECCCCCCCCCC FAWPALSADGYMFTCRMGDCEYLRNAMIAARVPWRWEGVLHEFLAAPAHAPWQPLPGPVI CCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCEE DVSHDGARARDPQTYLRDIAVLEQALRDEPGNTRYAFYLAQSLRDAGRLQESREAYRRRA ECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHH AMGGWDEECWFAVFQVAVLTERLDGPPHEVREAYLAAYAQRPARAEPLCELARYHRLRSE HCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH FALAHLYAQQAARMPRPADILFVDAGVYAWRSLDELAVSAFYVQAFEQGREALQKLLRER HHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RFPASETARIEANRPFFGL CCCCCCCCEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA