Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120609965
Identifier: 120609965
GI number: 120609965
Start: 1402934
End: 1403428
Strand: Direct
Name: 120609965
Synonym: Aave_1278
Alternate gene names: NA
Gene position: 1402934-1403428 (Clockwise)
Preceding gene: 120609964
Following gene: 120609967
Centisome position: 26.21
GC content: 71.72
Gene sequence:
>495_bases ATGAAGGTGCTTGACCTGCATTGCGCGCTCGACCATGCCTTCGAGGGATGGTTCGCATCCGAAGCGGATTTCCAGGACCA GCTTGCCCGTGGCCTGGTGGAGTGCCCCCTGTGCGGCAGCCGGGAAATCCGCAAGATGCTCAGCGCGCCCCGGCTGAACC TGAAGTCTTCCGCCGGAGCGTCCGTGGCGGTGCCCGGCACTCCCGCGCAGGCGGGCCAGGCGATGCCGTCCGGCCCGTGC GCTCCCGGGGCAGAGGGGCCCGCGTCCCGGGCCCTGCAGGCTGCGTGGCTGCGGCTCGCCCGCCACGTGATGGCCCATAC CGAGGATGTCGGAAGCCGCTTCGCCCAGGAGGCGCGCCGCATCCACGAGGGCGACGCCGAGGACCGGCCCATCCGCGGCC AGGCCAGCGTGCAGGAGACGGTGCAGCTGCTGGAGGAGGGCATCCCCGTGCTGCCGCTGCCCCTGCCTGCCGCCGCCAAG GAAACCCTGCAATAG
Upstream 100 bases:
>100_bases TCGCTACCTGCTGCGCCGCAGGGGCTGACGGCGGCCCGCAGGCGCCCATACCGTCGCCCGCGCATGTGAACGTACACGCC ACGGACTTCGTTTCATCATC
Downstream 100 bases:
>100_bases CGCGAAAGGCCGCGCCGTGCGGCCCCGCGGGACGGCGGCCTGCCTTCAGGCCGTGAACTGCAGCGCCGCGAGGCGGGCAT ACGGGCCGCCGCGCAGCATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 164; Mature: 164
Protein sequence:
>164_residues MKVLDLHCALDHAFEGWFASEADFQDQLARGLVECPLCGSREIRKMLSAPRLNLKSSAGASVAVPGTPAQAGQAMPSGPC APGAEGPASRALQAAWLRLARHVMAHTEDVGSRFAQEARRIHEGDAEDRPIRGQASVQETVQLLEEGIPVLPLPLPAAAK ETLQ
Sequences:
>Translated_164_residues MKVLDLHCALDHAFEGWFASEADFQDQLARGLVECPLCGSREIRKMLSAPRLNLKSSAGASVAVPGTPAQAGQAMPSGPC APGAEGPASRALQAAWLRLARHVMAHTEDVGSRFAQEARRIHEGDAEDRPIRGQASVQETVQLLEEGIPVLPLPLPAAAK ETLQ >Mature_164_residues MKVLDLHCALDHAFEGWFASEADFQDQLARGLVECPLCGSREIRKMLSAPRLNLKSSAGASVAVPGTPAQAGQAMPSGPC APGAEGPASRALQAAWLRLARHVMAHTEDVGSRFAQEARRIHEGDAEDRPIRGQASVQETVQLLEEGIPVLPLPLPAAAK ETLQ
Specific function: Unknown
COG id: COG5319
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17449; Mature: 17449
Theoretical pI: Translated: 6.00; Mature: 6.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVLDLHCALDHAFEGWFASEADFQDQLARGLVECPLCGSREIRKMLSAPRLNLKSSAGA CCEEHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCC SVAVPGTPAQAGQAMPSGPCAPGAEGPASRALQAAWLRLARHVMAHTEDVGSRFAQEARR EEECCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IHEGDAEDRPIRGQASVQETVQLLEEGIPVLPLPLPAAAKETLQ HHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCC >Mature Secondary Structure MKVLDLHCALDHAFEGWFASEADFQDQLARGLVECPLCGSREIRKMLSAPRLNLKSSAGA CCEEHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCC SVAVPGTPAQAGQAMPSGPCAPGAEGPASRALQAAWLRLARHVMAHTEDVGSRFAQEARR EEECCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IHEGDAEDRPIRGQASVQETVQLLEEGIPVLPLPLPAAAKETLQ HHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA