Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120609964
Identifier: 120609964
GI number: 120609964
Start: 1402541
End: 1402861
Strand: Direct
Name: 120609964
Synonym: Aave_1277
Alternate gene names: NA
Gene position: 1402541-1402861 (Clockwise)
Preceding gene: 120609963
Following gene: 120609965
Centisome position: 26.2
GC content: 67.29
Gene sequence:
>321_bases TTGCGATCGCTTCCCGTGTCATCCTCCGCCTCCATCTGGCTCGTGATCGTGGCGGCCCTCTTGGCCGCCAATCTGCCGTT CTGCAACCACCGCTGGCTGGTGGTCGGGCCCCGCGCGGTGCCCTCCAAGCCCCTGGCGGCACGGCTGGGGGAATGGCTGC TGTTCTACTTCCTGGTGGGCGGGCTGGCCCTGCTTCTGGAAAAGCGTGCCGGCCAGATCGCTCCGCAGGGCTGGGAGTTC TATGCCATCACGGTCGCGCTCTTCGCGACGCTGGCCTTTCCCGGTTTCGTCTATCGCTACCTGCTGCGCCGCAGGGGCTG A
Upstream 100 bases:
>100_bases GACCGTTTGCGGAGGCCGGCCGCCATTCCCGCTCCATCGCGCTCCGCCACCACGCGGGCGCGGCGGTGGAGAGAGGGGAA GGGCGCTGCCTCCGGACCTG
Downstream 100 bases:
>100_bases CGGCGGCCCGCAGGCGCCCATACCGTCGCCCGCGCATGTGAACGTACACGCCACGGACTTCGTTTCATCATCATGAAGGT GCTTGACCTGCATTGCGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 106; Mature: 106
Protein sequence:
>106_residues MRSLPVSSSASIWLVIVAALLAANLPFCNHRWLVVGPRAVPSKPLAARLGEWLLFYFLVGGLALLLEKRAGQIAPQGWEF YAITVALFATLAFPGFVYRYLLRRRG
Sequences:
>Translated_106_residues MRSLPVSSSASIWLVIVAALLAANLPFCNHRWLVVGPRAVPSKPLAARLGEWLLFYFLVGGLALLLEKRAGQIAPQGWEF YAITVALFATLAFPGFVYRYLLRRRG >Mature_106_residues MRSLPVSSSASIWLVIVAALLAANLPFCNHRWLVVGPRAVPSKPLAARLGEWLLFYFLVGGLALLLEKRAGQIAPQGWEF YAITVALFATLAFPGFVYRYLLRRRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11773; Mature: 11773
Theoretical pI: Translated: 11.37; Mature: 11.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSLPVSSSASIWLVIVAALLAANLPFCNHRWLVVGPRAVPSKPLAARLGEWLLFYFLVG CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHH GLALLLEKRAGQIAPQGWEFYAITVALFATLAFPGFVYRYLLRRRG HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRSLPVSSSASIWLVIVAALLAANLPFCNHRWLVVGPRAVPSKPLAARLGEWLLFYFLVG CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHH GLALLLEKRAGQIAPQGWEFYAITVALFATLAFPGFVYRYLLRRRG HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA