Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120609878
Identifier: 120609878
GI number: 120609878
Start: 1309589
End: 1310212
Strand: Direct
Name: 120609878
Synonym: Aave_1190
Alternate gene names: NA
Gene position: 1309589-1310212 (Clockwise)
Preceding gene: 120609877
Following gene: 120609879
Centisome position: 24.47
GC content: 71.63
Gene sequence:
>624_bases ATGAAAGACGACCCGACAATGCGTGAGCAGCTTTCCGCGCTGGCCGACGGCGGCATCAGTGAGGCCGAGTGGGGCGAAGC CTTCGCTTATGCCCGGACTGCCGAAGGCCAGGAGGCCTGGGCCGTCTATCACCTGATCGGTGACGTGCTGCGCTCCCCCG AGCTGGCCCGCCCTGGCAATGCCGCCCTGGCCGATCGCGTGATGGCCCAGTTGGCACGGGAGGAACGGCCGGCTGCCGAG GTGGCTCTGCCGGAAGCCGCCGTCCCCCTGGCAGCTGCCATCCAATCCCAGGGCGAGGCGGCGAATGCCGCCGTGTTCCG CTGGAAGATGGTCGCCGGCCTGGCTTCGCTGGCCGCGGTCGGCGTGCTGGGCTGGAGCGGCCTGTCCGGCGGACCGTCGG CCGGCGGCGAAACCCGGCTGGCTGCCGTGCCGTCGCGCATGGAGGTGCCGGCCGCCACGACGCTGGTGTCTGCCACCGAC CCCGCGGGCGAACCGCAGGTGATGCTGCGCGATCCCCGCCTCGACGAACTGCTGGCGGCGCACCGCCAGTACGGGGGCGC TTCCGCGCTCCAGATGCCGGCAGGTTTCCTGCGCAATGCCACCTTCGAAACGCCCCAGCGCTGA
Upstream 100 bases:
>100_bases GACCTTTGCTGGAAAAGCAGACAGGCAAGCGCTGGTGATGCAGGTGTGCCCGGGAGGCCGGGGCAGCGTGCCGGCCCAAG GACGATAGCAGGTGAGAAGC
Downstream 100 bases:
>100_bases GCGCTTGCACTACCGGAGATCGGGATTGGCAGGTCCGAGGAACGCCGACGGCTGGGTGCCGCGATTCCAGCACGGCCGTT GTTGGGTGAGGACGATGGCG
Product: anti sigma-E protein RseA
Products: NA
Alternate protein names: Anti Sigma-E Protein Rsea
Number of amino acids: Translated: 207; Mature: 207
Protein sequence:
>207_residues MKDDPTMREQLSALADGGISEAEWGEAFAYARTAEGQEAWAVYHLIGDVLRSPELARPGNAALADRVMAQLAREERPAAE VALPEAAVPLAAAIQSQGEAANAAVFRWKMVAGLASLAAVGVLGWSGLSGGPSAGGETRLAAVPSRMEVPAATTLVSATD PAGEPQVMLRDPRLDELLAAHRQYGGASALQMPAGFLRNATFETPQR
Sequences:
>Translated_207_residues MKDDPTMREQLSALADGGISEAEWGEAFAYARTAEGQEAWAVYHLIGDVLRSPELARPGNAALADRVMAQLAREERPAAE VALPEAAVPLAAAIQSQGEAANAAVFRWKMVAGLASLAAVGVLGWSGLSGGPSAGGETRLAAVPSRMEVPAATTLVSATD PAGEPQVMLRDPRLDELLAAHRQYGGASALQMPAGFLRNATFETPQR >Mature_207_residues MKDDPTMREQLSALADGGISEAEWGEAFAYARTAEGQEAWAVYHLIGDVLRSPELARPGNAALADRVMAQLAREERPAAE VALPEAAVPLAAAIQSQGEAANAAVFRWKMVAGLASLAAVGVLGWSGLSGGPSAGGETRLAAVPSRMEVPAATTLVSATD PAGEPQVMLRDPRLDELLAAHRQYGGASALQMPAGFLRNATFETPQR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21587; Mature: 21587
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDDPTMREQLSALADGGISEAEWGEAFAYARTAEGQEAWAVYHLIGDVLRSPELARPGN CCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCC AALADRVMAQLAREERPAAEVALPEAAVPLAAAIQSQGEAANAAVFRWKMVAGLASLAAV HHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH GVLGWSGLSGGPSAGGETRLAAVPSRMEVPAATTLVSATDPAGEPQVMLRDPRLDELLAA HHHCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHEEECCCCCCCCCEEEECCCHHHHHHH HRQYGGASALQMPAGFLRNATFETPQR HHHCCCCHHHHHCHHHHHCCCCCCCCC >Mature Secondary Structure MKDDPTMREQLSALADGGISEAEWGEAFAYARTAEGQEAWAVYHLIGDVLRSPELARPGN CCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCC AALADRVMAQLAREERPAAEVALPEAAVPLAAAIQSQGEAANAAVFRWKMVAGLASLAAV HHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH GVLGWSGLSGGPSAGGETRLAAVPSRMEVPAATTLVSATDPAGEPQVMLRDPRLDELLAA HHHCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHEEECCCCCCCCCEEEECCCHHHHHHH HRQYGGASALQMPAGFLRNATFETPQR HHHCCCCHHHHHCHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA