Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120609876
Identifier: 120609876
GI number: 120609876
Start: 1308381
End: 1308884
Strand: Direct
Name: 120609876
Synonym: Aave_1188
Alternate gene names: NA
Gene position: 1308381-1308884 (Clockwise)
Preceding gene: 120609875
Following gene: 120609877
Centisome position: 24.44
GC content: 71.83
Gene sequence:
>504_bases ATGGCCGATCTCGCGCGGGAAGAGTTCCACGCTCCGGTGTTGCGCCACCCCGCAGGCGCGGAACATCGGCTCCGCGGCTG GGTTCTCGGGCTCAGCCTCGCGGGTTTCGCAGCCTGGGCGGCATGGGCCGTTTCCGGAAGCGGCCCGTCTGCCTGGACGG TCGCCTGTGGCCTGGGGCTGTGGGGCTGGGTCTCCCTGCTGGGCTGGCGCGCGGCAACCCGCTGGACCTCCGGCGTCCTT GCATGGGATGGCTTGCTGTGGTCCCTGGACCGTGGCAGGGCATCCTCCCCGCTGTGCGGGCGCCTGGAGGTCGCACTGGA TCTGCAGCGTTTCCTGCTGGTGCGCTTCGTGGGTCAGGACGGCCGCCATGCATGGCTGGGCCTGGAGCCTGGCCGCCATG CCGCCGGATGGGCTGCGCTCCGCCGTGCGGTATATTCGCGCCCCAGACGGGAGCCCGCAGCCCAGGGGCCGACGATGCCC CCTGCTCATCGCCCAGATGCGTGA
Upstream 100 bases:
>100_bases GGACGTCGCCGTGAAGAACAATTTCGGGTTCGGCGGCACGAACGGCACGCTGGTTTTCCGGCGCATCTGACGGCCGCACC GCCGTCGCGGCTCCGGATCC
Downstream 100 bases:
>100_bases GCTTACGAATACATGAACGCTTCCCTGCCCCCGCCTTCCCCTGCCGACAGCGACCTCCAGCTCGTGGAGCGCACCGTGTC CGGCGACCAGCGGGCCTACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 167; Mature: 166
Protein sequence:
>167_residues MADLAREEFHAPVLRHPAGAEHRLRGWVLGLSLAGFAAWAAWAVSGSGPSAWTVACGLGLWGWVSLLGWRAATRWTSGVL AWDGLLWSLDRGRASSPLCGRLEVALDLQRFLLVRFVGQDGRHAWLGLEPGRHAAGWAALRRAVYSRPRREPAAQGPTMP PAHRPDA
Sequences:
>Translated_167_residues MADLAREEFHAPVLRHPAGAEHRLRGWVLGLSLAGFAAWAAWAVSGSGPSAWTVACGLGLWGWVSLLGWRAATRWTSGVL AWDGLLWSLDRGRASSPLCGRLEVALDLQRFLLVRFVGQDGRHAWLGLEPGRHAAGWAALRRAVYSRPRREPAAQGPTMP PAHRPDA >Mature_166_residues ADLAREEFHAPVLRHPAGAEHRLRGWVLGLSLAGFAAWAAWAVSGSGPSAWTVACGLGLWGWVSLLGWRAATRWTSGVLA WDGLLWSLDRGRASSPLCGRLEVALDLQRFLLVRFVGQDGRHAWLGLEPGRHAAGWAALRRAVYSRPRREPAAQGPTMPP AHRPDA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18182; Mature: 18051
Theoretical pI: Translated: 11.78; Mature: 11.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADLAREEFHAPVLRHPAGAEHRLRGWVLGLSLAGFAAWAAWAVSGSGPSAWTVACGLGL CCCCCHHHHCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH WGWVSLLGWRAATRWTSGVLAWDGLLWSLDRGRASSPLCGRLEVALDLQRFLLVRFVGQD HHHHHHHHHHHHHHHHCCHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC GRHAWLGLEPGRHAAGWAALRRAVYSRPRREPAAQGPTMPPAHRPDA CCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure ADLAREEFHAPVLRHPAGAEHRLRGWVLGLSLAGFAAWAAWAVSGSGPSAWTVACGLGL CCCCHHHHCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH WGWVSLLGWRAATRWTSGVLAWDGLLWSLDRGRASSPLCGRLEVALDLQRFLLVRFVGQD HHHHHHHHHHHHHHHHCCHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC GRHAWLGLEPGRHAAGWAALRRAVYSRPRREPAAQGPTMPPAHRPDA CCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA