Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is nhaA [H]
Identifier: 120609865
GI number: 120609865
Start: 1299340
End: 1300392
Strand: Direct
Name: nhaA [H]
Synonym: Aave_1177
Alternate gene names: 120609865
Gene position: 1299340-1300392 (Clockwise)
Preceding gene: 120609864
Following gene: 120609868
Centisome position: 24.27
GC content: 66.19
Gene sequence:
>1053_bases ATGACCGATCCGACCCGGAAAGAACCCTCCGGCCTGGAAGCTGATCCGTCGTCCACACCTGACCTGTGGGCCCAGAGTGC TCCTGAAAAAATAGCAAAAGACACCCCCGCCGCCGCCGGCAAGCCCCCGGGCTGGGAGCGCGACGTGCTGGAAAAACTCG TCTTCGCCACACTCTCCGAACAGCGCTCCGCGCGCCGCTGGCGTGTTTTCACCCGCATGGCATGGCTGGTTTTCCTGGTC GCCGTGGCCTGGGTGTTGCTTGCGCGCGACGTTGCGGCGCCCAGCAAAAGCACGCCCCACACCGCCGTGGTGGACATCAA GGGCGAGATCGCGTCCGGTGCCGAGGCGAGCGCGGAATTCGTGGTCGCGGCCATGCGCAGTGCCTTCGAGGACTCCGGCT CCCAGGCCGTGGTGCTGCTCATCAACTCCCCCGGCGGCAGCCCGGTGCAGGCAGGCATCATCAACGACGAGATCCTGAGG CTCAAGGCCAAGTACAACAAGCCGGTCTATGCGGTGGTCGAGGAAACCTGCGCCTCCGCCGCCTACTACATCGCGGCCGG AGCCGACCAGATCTTCGTGGACAAGGCCAGCATCGTCGGCAGCATCGGCGTGTTGATGGACGGATTCGGCTTCACCGGCA CGATGGAAAAGCTCGGCGTGGAGCGCCGCCTGCTCACGGCGGGCGAGAACAAGGGCTTCCTCGATCCGTTCAGCCCGATG TCGGAGAAGCAGCGTACGTATGCGCAGGCCATGCTCGACCAGATCCACCAGCAGTTCATCCAGGTGGTGCAGAAAGGGCG GGGCGATCGCCTCAAGCCCACGGCGGACACGTTCAGCGGCCTGTTCTGGACGGGCCAGCAGGCCGTCGACATGGGCCTGG CCGACCACCTGGGCAACCTCGATTACGTGGCCCGCGAGGTCGTCAAGGCCGAGGACATCATCGACTACACGCGCCGGGAC AACGTGGCCGAGCGCCTGGTGAAGAAGTTCGGCGCTGCCATGGGCGAAACGGCCATCCGCGCCCTGGGCGCCAGCCTGCC GGCGGTGCGCTGA
Upstream 100 bases:
>100_bases GCCGTGGCGGACTGGTGAAGATCGCAATTTCGGAAGAGTCCGGAGTGGTGCGCTGGCATACTGGCTCCCAATTGCAACCC GTGGAATTCTGAGACATCCC
Downstream 100 bases:
>100_bases ACAGGCGGGTTCACTTCCAGCAAAAAAAGAGGCGCCGCGGCGCCTCTTTTTCGTTCCTGCCCGGGATCAGCGTCCAATGG CGAACACGACGGGCGTGCGA
Product: peptidase S49
Products: NA
Alternate protein names: Sodium/proton antiporter nhaA [H]
Number of amino acids: Translated: 350; Mature: 349
Protein sequence:
>350_residues MTDPTRKEPSGLEADPSSTPDLWAQSAPEKIAKDTPAAAGKPPGWERDVLEKLVFATLSEQRSARRWRVFTRMAWLVFLV AVAWVLLARDVAAPSKSTPHTAVVDIKGEIASGAEASAEFVVAAMRSAFEDSGSQAVVLLINSPGGSPVQAGIINDEILR LKAKYNKPVYAVVEETCASAAYYIAAGADQIFVDKASIVGSIGVLMDGFGFTGTMEKLGVERRLLTAGENKGFLDPFSPM SEKQRTYAQAMLDQIHQQFIQVVQKGRGDRLKPTADTFSGLFWTGQQAVDMGLADHLGNLDYVAREVVKAEDIIDYTRRD NVAERLVKKFGAAMGETAIRALGASLPAVR
Sequences:
>Translated_350_residues MTDPTRKEPSGLEADPSSTPDLWAQSAPEKIAKDTPAAAGKPPGWERDVLEKLVFATLSEQRSARRWRVFTRMAWLVFLV AVAWVLLARDVAAPSKSTPHTAVVDIKGEIASGAEASAEFVVAAMRSAFEDSGSQAVVLLINSPGGSPVQAGIINDEILR LKAKYNKPVYAVVEETCASAAYYIAAGADQIFVDKASIVGSIGVLMDGFGFTGTMEKLGVERRLLTAGENKGFLDPFSPM SEKQRTYAQAMLDQIHQQFIQVVQKGRGDRLKPTADTFSGLFWTGQQAVDMGLADHLGNLDYVAREVVKAEDIIDYTRRD NVAERLVKKFGAAMGETAIRALGASLPAVR >Mature_349_residues TDPTRKEPSGLEADPSSTPDLWAQSAPEKIAKDTPAAAGKPPGWERDVLEKLVFATLSEQRSARRWRVFTRMAWLVFLVA VAWVLLARDVAAPSKSTPHTAVVDIKGEIASGAEASAEFVVAAMRSAFEDSGSQAVVLLINSPGGSPVQAGIINDEILRL KAKYNKPVYAVVEETCASAAYYIAAGADQIFVDKASIVGSIGVLMDGFGFTGTMEKLGVERRLLTAGENKGFLDPFSPMS EKQRTYAQAMLDQIHQQFIQVVQKGRGDRLKPTADTFSGLFWTGQQAVDMGLADHLGNLDYVAREVVKAEDIIDYTRRDN VAERLVKKFGAAMGETAIRALGASLPAVR
Specific function: Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons [H]
COG id: COG0616
COG function: function code OU; Periplasmic serine proteases (ClpP class)
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the peptidase S49 family [H]
Homologues:
Organism=Escherichia coli, GI1787527, Length=258, Percent_Identity=30.6201550387597, Blast_Score=99, Evalue=4e-22, Organism=Escherichia coli, GI1788064, Length=221, Percent_Identity=28.5067873303167, Blast_Score=64, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023171 - InterPro: IPR004670 - InterPro: IPR002142 [H]
Pfam domain/function: PF06965 Na_H_antiport_1; PF01343 Peptidase_S49 [H]
EC number: 3.4.21.- [C]
Molecular weight: Translated: 37819; Mature: 37688
Theoretical pI: Translated: 5.88; Mature: 5.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDPTRKEPSGLEADPSSTPDLWAQSAPEKIAKDTPAAAGKPPGWERDVLEKLVFATLSE CCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH QRSARRWRVFTRMAWLVFLVAVAWVLLARDVAAPSKSTPHTAVVDIKGEIASGAEASAEF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHHH VVAAMRSAFEDSGSQAVVLLINSPGGSPVQAGIINDEILRLKAKYNKPVYAVVEETCASA HHHHHHHHHHCCCCCEEEEEEECCCCCCEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHH AYYIAAGADQIFVDKASIVGSIGVLMDGFGFTGTMEKLGVERRLLTAGENKGFLDPFSPM HHHEECCCCHHEEEHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCH SEKQRTYAQAMLDQIHQQFIQVVQKGRGDRLKPTADTFSGLFWTGQQAVDMGLADHLGNL HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCHHCCCHHHHHHHHHHHCCCH DYVAREVVKAEDIIDYTRRDNVAERLVKKFGAAMGETAIRALGASLPAVR HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TDPTRKEPSGLEADPSSTPDLWAQSAPEKIAKDTPAAAGKPPGWERDVLEKLVFATLSE CCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH QRSARRWRVFTRMAWLVFLVAVAWVLLARDVAAPSKSTPHTAVVDIKGEIASGAEASAEF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHHH VVAAMRSAFEDSGSQAVVLLINSPGGSPVQAGIINDEILRLKAKYNKPVYAVVEETCASA HHHHHHHHHHCCCCCEEEEEEECCCCCCEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHH AYYIAAGADQIFVDKASIVGSIGVLMDGFGFTGTMEKLGVERRLLTAGENKGFLDPFSPM HHHEECCCCHHEEEHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCH SEKQRTYAQAMLDQIHQQFIQVVQKGRGDRLKPTADTFSGLFWTGQQAVDMGLADHLGNL HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCHHCCCHHHHHHHHHHHCCCH DYVAREVVKAEDIIDYTRRDNVAERLVKKFGAAMGETAIRALGASLPAVR HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Hydrolase; Acting on peptide bonds (Peptidases) [C]
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA