Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

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The map label for this gene is argD1 [H]

Identifier: 120609852

GI number: 120609852

Start: 1283864

End: 1285060

Strand: Reverse

Name: argD1 [H]

Synonym: Aave_1164

Alternate gene names: 120609852

Gene position: 1285060-1283864 (Counterclockwise)

Preceding gene: 120609854

Following gene: 120609851

Centisome position: 24.01

GC content: 69.26

Gene sequence:

>1197_bases
ATGAGCGCTTCCGCCCAGCCCGCCTCGCCCCACGTGATGAACACCTACGGCCGCCTGCCGATCGCGCTCGAGCGAGGCCA
GGGCTGCAGGGTCTGGGACGTGGACGGCAAGCAGTACCTCGACGCGCTGGGCGGCATCGCCGTGAACACGCTGGGCCACA
ACCACCCGAAGCTGGTGCCCGCGCTGCAGGAGCAGGTGGCCAAGCTGATCCACAGCTCCAATTACTACCACGTGCCCCTG
CAGGAGCAGCTCGCCGCGCGGCTGGTGGAGCGTTCCGGCATGACCAACGTGTTCTTTTGCAATTCCGGGCTGGAGGCCAA
CGAGGCCGCGCTCAAGCTGGCGCGCAAGTACGGCCACGACAAGGGCATCGGGCGCCCGCAGATCGTGGTCTATGAGAAGG
CCTTCCACGGCCGCTCCATCGCCACCCTGTCGGCCACCGGCAACCCGAAGGTGCAGGCCGGCTTCGGCCCGCTGGTCGAA
GGCTTCATCCGCGTGCCGATGAACGACATCGAGGCCATCCGCCAAGCCACGGAGGGCAACCCCGACGTGGTGGCCGTGTT
CTTCGAGACCATCCAGGGCGAAGGCGGCGTGAACCCGATGCGCATCGAGTACCTGCAGCAGCTGCGGCAGCTCTGCGACG
AGCGCGGCTGGCTGATGATGATCGACGAGGTGCAGTGCGGCATGGGCCGCACCGGCAGGTGGTTCGCGCACCAGTGGGCC
GGCATCGTGCCGGACGTGATGCCGCTGGCCAAGGGCCTGGGCTCGGGCGTGCCGATCGGCGCCGTGGTGGCCGGCCCCAA
GGCCGCGAACATCTTCGCGCCGGGCAACCACGGCACGACCTTCGGCGGCAACCCGCTGGCCATGCGTGCGGGCGTGGAAA
CCATCCGCATCATGGAAGAAGAAGGCCTGCTGCAGAACGCGGCCGACGTGGGCGCCCACCTGAAGGCGGCCCTGCAGCGC
GAGCTGGGCGGGTTGCCCGGGGTGAAGGACATCCGCGGCCAGGGCCTGATGCTGGGCATCGAGCTCGACCGGCCGTGCGG
CGTGCTCGTGGGCCGTGCCGCGGAAGCCGGCCTGCTGCTGTCCGTCACCGCGGACAGCGTGATCCGCATGGTGCCCGCGC
TCATCCTCACGCGCGAAGAGGCCGACGAGATCGTGTCCCTGCTCGTTCCGCTGGTCAAGGCCTTCCTGGCCGAATGA

Upstream 100 bases:

>100_bases
ATGCCCTGCACCTAGAATCGTGCCTTCGCGCGCCGGGCGGCCTTCTCCCCGGACCGGCGCATTCTTTCCCGATTCGCATC
GAACGCCTGGAGATCTCCGC

Downstream 100 bases:

>100_bases
AAGCTCCCTCCGACATGAAGCACTATCTGCAATTCAAGGATTTTTCCGCTCAGGAATACGCCTATCTCTTCGAACGCGCG
GCGGTCATCAAGGGCAAGTT

Product: acetylornithine aminotransferase

Products: NA

Alternate protein names: ACOAT 1 [H]

Number of amino acids: Translated: 398; Mature: 397

Protein sequence:

>398_residues
MSASAQPASPHVMNTYGRLPIALERGQGCRVWDVDGKQYLDALGGIAVNTLGHNHPKLVPALQEQVAKLIHSSNYYHVPL
QEQLAARLVERSGMTNVFFCNSGLEANEAALKLARKYGHDKGIGRPQIVVYEKAFHGRSIATLSATGNPKVQAGFGPLVE
GFIRVPMNDIEAIRQATEGNPDVVAVFFETIQGEGGVNPMRIEYLQQLRQLCDERGWLMMIDEVQCGMGRTGRWFAHQWA
GIVPDVMPLAKGLGSGVPIGAVVAGPKAANIFAPGNHGTTFGGNPLAMRAGVETIRIMEEEGLLQNAADVGAHLKAALQR
ELGGLPGVKDIRGQGLMLGIELDRPCGVLVGRAAEAGLLLSVTADSVIRMVPALILTREEADEIVSLLVPLVKAFLAE

Sequences:

>Translated_398_residues
MSASAQPASPHVMNTYGRLPIALERGQGCRVWDVDGKQYLDALGGIAVNTLGHNHPKLVPALQEQVAKLIHSSNYYHVPL
QEQLAARLVERSGMTNVFFCNSGLEANEAALKLARKYGHDKGIGRPQIVVYEKAFHGRSIATLSATGNPKVQAGFGPLVE
GFIRVPMNDIEAIRQATEGNPDVVAVFFETIQGEGGVNPMRIEYLQQLRQLCDERGWLMMIDEVQCGMGRTGRWFAHQWA
GIVPDVMPLAKGLGSGVPIGAVVAGPKAANIFAPGNHGTTFGGNPLAMRAGVETIRIMEEEGLLQNAADVGAHLKAALQR
ELGGLPGVKDIRGQGLMLGIELDRPCGVLVGRAAEAGLLLSVTADSVIRMVPALILTREEADEIVSLLVPLVKAFLAE
>Mature_397_residues
SASAQPASPHVMNTYGRLPIALERGQGCRVWDVDGKQYLDALGGIAVNTLGHNHPKLVPALQEQVAKLIHSSNYYHVPLQ
EQLAARLVERSGMTNVFFCNSGLEANEAALKLARKYGHDKGIGRPQIVVYEKAFHGRSIATLSATGNPKVQAGFGPLVEG
FIRVPMNDIEAIRQATEGNPDVVAVFFETIQGEGGVNPMRIEYLQQLRQLCDERGWLMMIDEVQCGMGRTGRWFAHQWAG
IVPDVMPLAKGLGSGVPIGAVVAGPKAANIFAPGNHGTTFGGNPLAMRAGVETIRIMEEEGLLQNAADVGAHLKAALQRE
LGGLPGVKDIRGQGLMLGIELDRPCGVLVGRAAEAGLLLSVTADSVIRMVPALILTREEADEIVSLLVPLVKAFLAE

Specific function: Involved In Both The Arginine And Lysine Biosynthetic Pathways. [C]

COG id: COG4992

COG function: function code E; Ornithine/acetylornithine aminotransferase

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily [H]

Homologues:

Organism=Homo sapiens, GI4557809, Length=392, Percent_Identity=35.7142857142857, Blast_Score=239, Evalue=3e-63,
Organism=Homo sapiens, GI284507298, Length=305, Percent_Identity=36.0655737704918, Blast_Score=181, Evalue=1e-45,
Organism=Homo sapiens, GI13994255, Length=440, Percent_Identity=30.9090909090909, Blast_Score=169, Evalue=6e-42,
Organism=Homo sapiens, GI37574042, Length=411, Percent_Identity=28.9537712895377, Blast_Score=145, Evalue=9e-35,
Organism=Homo sapiens, GI24119277, Length=408, Percent_Identity=29.4117647058824, Blast_Score=144, Evalue=2e-34,
Organism=Homo sapiens, GI226442705, Length=411, Percent_Identity=28.2238442822384, Blast_Score=132, Evalue=4e-31,
Organism=Homo sapiens, GI226442709, Length=380, Percent_Identity=28.4210526315789, Blast_Score=127, Evalue=3e-29,
Organism=Homo sapiens, GI188536080, Length=427, Percent_Identity=24.1217798594848, Blast_Score=96, Evalue=6e-20,
Organism=Homo sapiens, GI38679950, Length=427, Percent_Identity=24.1217798594848, Blast_Score=96, Evalue=6e-20,
Organism=Homo sapiens, GI38679946, Length=427, Percent_Identity=24.1217798594848, Blast_Score=96, Evalue=6e-20,
Organism=Escherichia coli, GI1789759, Length=367, Percent_Identity=41.41689373297, Blast_Score=263, Evalue=1e-71,
Organism=Escherichia coli, GI1788044, Length=370, Percent_Identity=39.4594594594595, Blast_Score=261, Evalue=8e-71,
Organism=Escherichia coli, GI145693181, Length=368, Percent_Identity=38.8586956521739, Blast_Score=219, Evalue=2e-58,
Organism=Escherichia coli, GI1789016, Length=371, Percent_Identity=35.8490566037736, Blast_Score=202, Evalue=3e-53,
Organism=Escherichia coli, GI1787560, Length=396, Percent_Identity=32.8282828282828, Blast_Score=189, Evalue=3e-49,
Organism=Escherichia coli, GI1786349, Length=341, Percent_Identity=30.791788856305, Blast_Score=134, Evalue=1e-32,
Organism=Escherichia coli, GI1786991, Length=380, Percent_Identity=28.1578947368421, Blast_Score=122, Evalue=3e-29,
Organism=Caenorhabditis elegans, GI25144271, Length=390, Percent_Identity=35.6410256410256, Blast_Score=241, Evalue=4e-64,
Organism=Caenorhabditis elegans, GI32564660, Length=446, Percent_Identity=30.0448430493274, Blast_Score=182, Evalue=2e-46,
Organism=Caenorhabditis elegans, GI25144274, Length=273, Percent_Identity=35.1648351648352, Blast_Score=165, Evalue=4e-41,
Organism=Caenorhabditis elegans, GI71992977, Length=362, Percent_Identity=30.6629834254144, Blast_Score=144, Evalue=1e-34,
Organism=Caenorhabditis elegans, GI71981843, Length=171, Percent_Identity=38.5964912280702, Blast_Score=123, Evalue=2e-28,
Organism=Caenorhabditis elegans, GI17541228, Length=440, Percent_Identity=26.3636363636364, Blast_Score=100, Evalue=2e-21,
Organism=Saccharomyces cerevisiae, GI6324432, Length=399, Percent_Identity=37.0927318295739, Blast_Score=260, Evalue=2e-70,
Organism=Saccharomyces cerevisiae, GI6323470, Length=392, Percent_Identity=34.1836734693878, Blast_Score=210, Evalue=3e-55,
Organism=Saccharomyces cerevisiae, GI6324386, Length=351, Percent_Identity=25.0712250712251, Blast_Score=87, Evalue=3e-18,
Organism=Drosophila melanogaster, GI21357415, Length=383, Percent_Identity=33.9425587467363, Blast_Score=226, Evalue=2e-59,
Organism=Drosophila melanogaster, GI28574759, Length=454, Percent_Identity=29.295154185022, Blast_Score=179, Evalue=3e-45,
Organism=Drosophila melanogaster, GI161085790, Length=454, Percent_Identity=29.0748898678414, Blast_Score=177, Evalue=9e-45,
Organism=Drosophila melanogaster, GI21356575, Length=413, Percent_Identity=29.7820823244552, Blast_Score=151, Evalue=8e-37,
Organism=Drosophila melanogaster, GI281366494, Length=417, Percent_Identity=25.4196642685851, Blast_Score=96, Evalue=3e-20,
Organism=Drosophila melanogaster, GI24667139, Length=417, Percent_Identity=25.4196642685851, Blast_Score=96, Evalue=3e-20,
Organism=Drosophila melanogaster, GI24667143, Length=417, Percent_Identity=25.4196642685851, Blast_Score=96, Evalue=3e-20,

Paralogues:

None

Copy number: 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004636
- InterPro:   IPR005814
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00202 Aminotran_3 [H]

EC number: =2.6.1.11 [H]

Molecular weight: Translated: 42594; Mature: 42463

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: PS00600 AA_TRANSFER_CLASS_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSASAQPASPHVMNTYGRLPIALERGQGCRVWDVDGKQYLDALGGIAVNTLGHNHPKLVP
CCCCCCCCCCCHHHHCCCCEEEEECCCCCEEEECCHHHHHHHHCCEEEECCCCCCCCHHH
ALQEQVAKLIHSSNYYHVPLQEQLAARLVERSGMTNVFFCNSGLEANEAALKLARKYGHD
HHHHHHHHHHHCCCCEECCHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCC
KGIGRPQIVVYEKAFHGRSIATLSATGNPKVQAGFGPLVEGFIRVPMNDIEAIRQATEGN
CCCCCCEEEEEEECCCCCEEEEEECCCCCCEECCCCHHHHHHHHCCHHHHHHHHHHCCCC
PDVVAVFFETIQGEGGVNPMRIEYLQQLRQLCDERGWLMMIDEVQCGMGRTGRWFAHQWA
CCEEEEEEHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHH
GIVPDVMPLAKGLGSGVPIGAVVAGPKAANIFAPGNHGTTFGGNPLAMRAGVETIRIMEE
CCCHHHHHHHHHCCCCCCCCEEEECCCCCEEEECCCCCCCCCCCCEEECCCCHHEEEEHH
EGLLQNAADVGAHLKAALQRELGGLPGVKDIRGQGLMLGIELDRPCGVLVGRAAEAGLLL
CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCEEEEEEECCCCCCEEECCCCCCEEE
SVTADSVIRMVPALILTREEADEIVSLLVPLVKAFLAE
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SASAQPASPHVMNTYGRLPIALERGQGCRVWDVDGKQYLDALGGIAVNTLGHNHPKLVP
CCCCCCCCCCHHHHCCCCEEEEECCCCCEEEECCHHHHHHHHCCEEEECCCCCCCCHHH
ALQEQVAKLIHSSNYYHVPLQEQLAARLVERSGMTNVFFCNSGLEANEAALKLARKYGHD
HHHHHHHHHHHCCCCEECCHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCC
KGIGRPQIVVYEKAFHGRSIATLSATGNPKVQAGFGPLVEGFIRVPMNDIEAIRQATEGN
CCCCCCEEEEEEECCCCCEEEEEECCCCCCEECCCCHHHHHHHHCCHHHHHHHHHHCCCC
PDVVAVFFETIQGEGGVNPMRIEYLQQLRQLCDERGWLMMIDEVQCGMGRTGRWFAHQWA
CCEEEEEEHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHH
GIVPDVMPLAKGLGSGVPIGAVVAGPKAANIFAPGNHGTTFGGNPLAMRAGVETIRIMEE
CCCHHHHHHHHHCCCCCCCCEEEECCCCCEEEECCCCCCCCCCCCEEECCCCHHEEEEHH
EGLLQNAADVGAHLKAALQRELGGLPGVKDIRGQGLMLGIELDRPCGVLVGRAAEAGLLL
CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCEEEEEEECCCCCCEEECCCCCCEEE
SVTADSVIRMVPALILTREEADEIVSLLVPLVKAFLAE
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12910271 [H]