Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120609850
Identifier: 120609850
GI number: 120609850
Start: 1282197
End: 1282892
Strand: Reverse
Name: 120609850
Synonym: Aave_1162
Alternate gene names: NA
Gene position: 1282892-1282197 (Counterclockwise)
Preceding gene: 120609851
Following gene: 120609847
Centisome position: 23.97
GC content: 73.42
Gene sequence:
>696_bases ATGGCCGCTCCCGATCGCCGCGCGCTCCTGAGCCGCTGGGATGCGCTCGGGGCGGCCCTCTCGCGGCAGGGCCCGGCCTG GACGGCGGAGGGCCGCCGGCTGCTGCGCCACTGGTCGTTCTGGCCGCGGGCGTACCACGACACGCACCACCTGCAGGCCT GCCTCGACCACTGGGACGCCGCGCGCAATCCGGCCGGCCACGGCCCGGGTGCGGAGACCGCCACCGAGGCGATGGACGAC CCGCGTACCGTCGCCCTGGCGCTCTGGTTCCACGACGCCGTTTACTGGCCCTGGTCGGGCCGCAACGAGGAGCGCAGCGC CCGCTGGGCACGCCGCTTCCTGCAGGGCCAGGGCCTGCCTGCCGACACCGTGAGCACCGTGGAACGCCACATCCTCGCGA CGTGCCACGGCCACGCGTCCGCAGTGACGGGCGACGACCGCTGGGTGGTGGACATCGACCTCGCAATCCTCGGCCAGCCG CCCGCGGTGTATGCCGCTTTCGAGCGCAACGTGCGGCGCGAATACCGCTTCGTGCGCTGGCCCCGCTACCGCGCCGGCCG CTGCGCGATCCTGCGCTCGTTCCTGGAACGCCCTGCGCTCTACGACACGGAATGGTTCCGAAGCCGTTATGAAGCGCAGG CGCGGGCGAACCTGGCGCATGCGCTGGACGTGCTGGGTGCCGGCGGCGCGTTCTGA
Upstream 100 bases:
>100_bases CATGCACGTGCAGAAGGCGCTGATGGAGTACCTGCTGCTCGGCCAGGTCGCGTGAGGCGCCTGCCTCAAGCCTAGCGGCG CTCCACCTTTCTTCACTGCC
Downstream 100 bases:
>100_bases TCGCGCGGAAAGCCCTTCATGAAAATTCAGGCGTCGCCGCTGCCCTCGCCCGCGCGCGGCTTCGCTGCGTCCCCGTCGTG CGCCCGGCCCTGCGCGGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 231; Mature: 230
Protein sequence:
>231_residues MAAPDRRALLSRWDALGAALSRQGPAWTAEGRRLLRHWSFWPRAYHDTHHLQACLDHWDAARNPAGHGPGAETATEAMDD PRTVALALWFHDAVYWPWSGRNEERSARWARRFLQGQGLPADTVSTVERHILATCHGHASAVTGDDRWVVDIDLAILGQP PAVYAAFERNVRREYRFVRWPRYRAGRCAILRSFLERPALYDTEWFRSRYEAQARANLAHALDVLGAGGAF
Sequences:
>Translated_231_residues MAAPDRRALLSRWDALGAALSRQGPAWTAEGRRLLRHWSFWPRAYHDTHHLQACLDHWDAARNPAGHGPGAETATEAMDD PRTVALALWFHDAVYWPWSGRNEERSARWARRFLQGQGLPADTVSTVERHILATCHGHASAVTGDDRWVVDIDLAILGQP PAVYAAFERNVRREYRFVRWPRYRAGRCAILRSFLERPALYDTEWFRSRYEAQARANLAHALDVLGAGGAF >Mature_230_residues AAPDRRALLSRWDALGAALSRQGPAWTAEGRRLLRHWSFWPRAYHDTHHLQACLDHWDAARNPAGHGPGAETATEAMDDP RTVALALWFHDAVYWPWSGRNEERSARWARRFLQGQGLPADTVSTVERHILATCHGHASAVTGDDRWVVDIDLAILGQPP AVYAAFERNVRREYRFVRWPRYRAGRCAILRSFLERPALYDTEWFRSRYEAQARANLAHALDVLGAGGAF
Specific function: Unknown
COG id: COG4339
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26275; Mature: 26143
Theoretical pI: Translated: 9.17; Mature: 9.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAPDRRALLSRWDALGAALSRQGPAWTAEGRRLLRHWSFWPRAYHDTHHLQACLDHWDA CCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHCHHHHHHHHHHHHHH ARNPAGHGPGAETATEAMDDPRTVALALWFHDAVYWPWSGRNEERSARWARRFLQGQGLP HCCCCCCCCCCHHHHHHCCCCHHEEHHEEHHHCEECCCCCCCHHHHHHHHHHHHHCCCCC ADTVSTVERHILATCHGHASAVTGDDRWVVDIDLAILGQPPAVYAAFERNVRREYRFVRW HHHHHHHHHHHHHHHCCCCCEECCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCC PRYRAGRCAILRSFLERPALYDTEWFRSRYEAQARANLAHALDVLGAGGAF CCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure AAPDRRALLSRWDALGAALSRQGPAWTAEGRRLLRHWSFWPRAYHDTHHLQACLDHWDA CCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHCHHHHHHHHHHHHHH ARNPAGHGPGAETATEAMDDPRTVALALWFHDAVYWPWSGRNEERSARWARRFLQGQGLP HCCCCCCCCCCHHHHHHCCCCHHEEHHEEHHHCEECCCCCCCHHHHHHHHHHHHHCCCCC ADTVSTVERHILATCHGHASAVTGDDRWVVDIDLAILGQPPAVYAAFERNVRREYRFVRW HHHHHHHHHHHHHHHCCCCCEECCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCC PRYRAGRCAILRSFLERPALYDTEWFRSRYEAQARANLAHALDVLGAGGAF CCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA