Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is feoB [H]
Identifier: 120609849
GI number: 120609849
Start: 1279945
End: 1281843
Strand: Direct
Name: feoB [H]
Synonym: Aave_1161
Alternate gene names: 120609849
Gene position: 1279945-1281843 (Clockwise)
Preceding gene: 120609848
Following gene: 120609853
Centisome position: 23.91
GC content: 71.46
Gene sequence:
>1899_bases ATGACCGTGCAGGCGTCCTCCGCAGCCGCGCAGCCGCTGCGCATCGCCCTGCTGGGCAACCCCAATTGCGGCAAGACCGC GCTCTTCAACCTGTTGACCGGCGCGCGGCAAAAGGTCGCCAACTACGCGGGCGTCACCGTGGAGCGCAAGGAAGGGCACC TGCAGACCGCGAACGGCCGCCGCGTGCGCGTGCTCGACCTGCCCGGCACCTACAGCTTGAACGCCCACAGCCTCGACGAG GCCGTCACGCGCGACATCGTCATGGGGCGGCGCGCGGGCGAACCCCTGCCCGACCTGCTGGTGTGCGTGACCGACGCGAC GCATCTGCGGCTCAACCTGCGCCTCGTTCTCGAAGCCCGTGCGCTCGGCCTGCCGATGGTGCTGGCGCTCAACATGAGCG ACATGGCCGAGCGCCAGGGCATCACGATCGACCGCGAGGTGCTGTCGCGCGAGCTGGGCATGCCGGTGATCGGCACCGTG GGCGTGCGCGCCGGAGGCGTGCGCGAGCTGCTGCAGTGGCTGGACCAGGCCCAGCCGTCCGCGCTCGCCGCGCCGGCAGC GCCCGCGCCGGCCTCCGGGGACGGCGCGCAGCCCCTGGTGGCGGAGCTGCACCGGGAGGTGCGCCGCATCATGGACTTGG CCGTGCGCGAGCCCCAGGTGAGCCTGCGCCGCGACGACCGCATCGACGCCGTGGTGCTGCACCCGGTGTGGGGCCTGCTG CTGCTGGCCGTCACGCTGTTCCTGATGTTCCAGGCCGTGTTCAGCTGGGCCGAGGCGCCCATGGGCTGGATCGAGGGCGC CACGGCCGCGACCGCCGCGTGGATCAACGCCCACATGGCCGAGGGCACGCTGCGCAGCCTGCTCACCGACGGGATCATCG CGGGCGCCGGCGGGGTGGTGGTGTTCCTGCCGCAGATCCTGATCCTGTTCTTCTTCATCCTCGTGCTCGAGGACTCCGGC TATCTGCCGCGTGCCGCGTTCCTGCTGGATCGCGTGATGGGCACCGTGGGTCTCTCCGGCCGGTCGTTCATCCCGCTGCT CTCGAGCTTCGCCTGCGCCATTCCCGGGGTGATGGCCACGCGCTCGATTCCCGACTGGCGCGACCGGCTGGTGACCATCA TGATCGCGCCGCTGATGACCTGCTCCGCGCGCCTGCCGGTGTATGCGCTGCTGATCGCCGCCTTCATCCCCGAGCGGACC GTGGGCGGCGTGTTCAACCTGCAGGGCCTGGTGCTGTTCGGCCTGTACGTGGGCGGCATCGTGAGCGCCATGGCCGTCGC GGCCGTGGCCAGGCTGGCGCGCCGCAATGCCGGGGCCACGCCGCTGCTGATGGAGCTGCCCGCCTACCGCTGGCCCAGCC TGCGCGGCCTGGGCCTCGGCCTCTGGGAGCGGGCGCTGATCTTCCTGCGCCGCGTGGGTGGCATCATCCTGGCCGTCACC ATCCTGCTGTGGTTCCTGTCCTCGTTCCCCGGTGCGCCCGAAGGCGCCACGGGCCCGGCCATCGAATACAGCTTCGCCGG GCGCATCGGCAGCGTGCTCGCCGTGGTCTTCGCGCCCATCGGCTTCAACTGGCAGATCAGCATCGCGCTGGTGCCCGGCA TGGCCGCGCGCGAGGTTGCCGTCGGCGCCCTCGGCACCGTGTACGCGCTCTCCGCCACGGGCGACGACGCCGCCGCGCAG CTGGGGCCCCTGATCGCCGGCAGCTGGTCGCTCGCCACGGCGCTGTCGCTGCTGGTGTGGTTCATCTTCGCGCCGCAGTG CATCTCCACGATCGCCGCGGTGCGGCGCGAGACCAACGGCTGGCGCTATCCGCTCATCATGGTGGGCTACCTGTTCGGTC TGGCGTACGCCGCGAGCTTCGTCACCTACCGCATCGCACTCGCTCTCGGAGGAGGTTGA
Upstream 100 bases:
>100_bases TCCCCGGCGGTGATCCACTGGCCGTGCGCATCGGCCAGGCCACCTTCGCGCTGCGACGCCACGAAGCGGCGCTGGTGCAG GTGCAGCCGGAGGCCGCGGC
Downstream 100 bases:
>100_bases ACCGCCATGGCCCAGGACATCATCGTCGGCCTGATCGTCGCCGCGGCCGTGCTGTACGTCGCGTGGCGCTACCTGCCGCG GCGCTGGCGCAGCCGCCTCG
Product: ferrous iron transport protein B
Products: Fe (II) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 632; Mature: 631
Protein sequence:
>632_residues MTVQASSAAAQPLRIALLGNPNCGKTALFNLLTGARQKVANYAGVTVERKEGHLQTANGRRVRVLDLPGTYSLNAHSLDE AVTRDIVMGRRAGEPLPDLLVCVTDATHLRLNLRLVLEARALGLPMVLALNMSDMAERQGITIDREVLSRELGMPVIGTV GVRAGGVRELLQWLDQAQPSALAAPAAPAPASGDGAQPLVAELHREVRRIMDLAVREPQVSLRRDDRIDAVVLHPVWGLL LLAVTLFLMFQAVFSWAEAPMGWIEGATAATAAWINAHMAEGTLRSLLTDGIIAGAGGVVVFLPQILILFFFILVLEDSG YLPRAAFLLDRVMGTVGLSGRSFIPLLSSFACAIPGVMATRSIPDWRDRLVTIMIAPLMTCSARLPVYALLIAAFIPERT VGGVFNLQGLVLFGLYVGGIVSAMAVAAVARLARRNAGATPLLMELPAYRWPSLRGLGLGLWERALIFLRRVGGIILAVT ILLWFLSSFPGAPEGATGPAIEYSFAGRIGSVLAVVFAPIGFNWQISIALVPGMAAREVAVGALGTVYALSATGDDAAAQ LGPLIAGSWSLATALSLLVWFIFAPQCISTIAAVRRETNGWRYPLIMVGYLFGLAYAASFVTYRIALALGGG
Sequences:
>Translated_632_residues MTVQASSAAAQPLRIALLGNPNCGKTALFNLLTGARQKVANYAGVTVERKEGHLQTANGRRVRVLDLPGTYSLNAHSLDE AVTRDIVMGRRAGEPLPDLLVCVTDATHLRLNLRLVLEARALGLPMVLALNMSDMAERQGITIDREVLSRELGMPVIGTV GVRAGGVRELLQWLDQAQPSALAAPAAPAPASGDGAQPLVAELHREVRRIMDLAVREPQVSLRRDDRIDAVVLHPVWGLL LLAVTLFLMFQAVFSWAEAPMGWIEGATAATAAWINAHMAEGTLRSLLTDGIIAGAGGVVVFLPQILILFFFILVLEDSG YLPRAAFLLDRVMGTVGLSGRSFIPLLSSFACAIPGVMATRSIPDWRDRLVTIMIAPLMTCSARLPVYALLIAAFIPERT VGGVFNLQGLVLFGLYVGGIVSAMAVAAVARLARRNAGATPLLMELPAYRWPSLRGLGLGLWERALIFLRRVGGIILAVT ILLWFLSSFPGAPEGATGPAIEYSFAGRIGSVLAVVFAPIGFNWQISIALVPGMAAREVAVGALGTVYALSATGDDAAAQ LGPLIAGSWSLATALSLLVWFIFAPQCISTIAAVRRETNGWRYPLIMVGYLFGLAYAASFVTYRIALALGGG >Mature_631_residues TVQASSAAAQPLRIALLGNPNCGKTALFNLLTGARQKVANYAGVTVERKEGHLQTANGRRVRVLDLPGTYSLNAHSLDEA VTRDIVMGRRAGEPLPDLLVCVTDATHLRLNLRLVLEARALGLPMVLALNMSDMAERQGITIDREVLSRELGMPVIGTVG VRAGGVRELLQWLDQAQPSALAAPAAPAPASGDGAQPLVAELHREVRRIMDLAVREPQVSLRRDDRIDAVVLHPVWGLLL LAVTLFLMFQAVFSWAEAPMGWIEGATAATAAWINAHMAEGTLRSLLTDGIIAGAGGVVVFLPQILILFFFILVLEDSGY LPRAAFLLDRVMGTVGLSGRSFIPLLSSFACAIPGVMATRSIPDWRDRLVTIMIAPLMTCSARLPVYALLIAAFIPERTV GGVFNLQGLVLFGLYVGGIVSAMAVAAVARLARRNAGATPLLMELPAYRWPSLRGLGLGLWERALIFLRRVGGIILAVTI LLWFLSSFPGAPEGATGPAIEYSFAGRIGSVLAVVFAPIGFNWQISIALVPGMAAREVAVGALGTVYALSATGDDAAAQL GPLIAGSWSLATALSLLVWFIFAPQCISTIAAVRRETNGWRYPLIMVGYLFGLAYAASFVTYRIALALGGG
Specific function: Fe(2+) uptake system, probably driven by GTP [H]
COG id: COG0370
COG function: function code P; Fe2+ transport system protein B
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the feoB (TC 9.A.8) family [H]
Homologues:
Organism=Escherichia coli, GI1789813, Length=745, Percent_Identity=31.6778523489933, Blast_Score=287, Evalue=2e-78,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003373 - InterPro: IPR011640 - InterPro: IPR011619 - InterPro: IPR011642 - InterPro: IPR006073 - InterPro: IPR005225 [H]
Pfam domain/function: PF07664 FeoB_C; PF02421 FeoB_N; PF07670 Gate [H]
EC number: NA
Molecular weight: Translated: 67264; Mature: 67133
Theoretical pI: Translated: 9.32; Mature: 9.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVQASSAAAQPLRIALLGNPNCGKTALFNLLTGARQKVANYAGVTVERKEGHLQTANGR CCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCEECCCCC RVRVLDLPGTYSLNAHSLDEAVTRDIVMGRRAGEPLPDLLVCVTDATHLRLNLRLVLEAR EEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHEEECCCCEEEEEEEEEEEHH ALGLPMVLALNMSDMAERQGITIDREVLSRELGMPVIGTVGVRAGGVRELLQWLDQAQPS HCCCCEEEEECHHHHHHHCCCEECHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHCCCCC ALAAPAAPAPASGDGAQPLVAELHREVRRIMDLAVREPQVSLRRDDRIDAVVLHPVWGLL CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCEEEHHHHHHHH LLAVTLFLMFQAVFSWAEAPMGWIEGATAATAAWINAHMAEGTLRSLLTDGIIAGAGGVV HHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHH VFLPQILILFFFILVLEDSGYLPRAAFLLDRVMGTVGLSGRSFIPLLSSFACAIPGVMAT HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHH RSIPDWRDRLVTIMIAPLMTCSARLPVYALLIAAFIPERTVGGVFNLQGLVLFGLYVGGI CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHH VSAMAVAAVARLARRNAGATPLLMELPAYRWPSLRGLGLGLWERALIFLRRVGGIILAVT HHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH ILLWFLSSFPGAPEGATGPAIEYSFAGRIGSVLAVVFAPIGFNWQISIALVPGMAAREVA HHHHHHHCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHH VGALGTVYALSATGDDAAAQLGPLIAGSWSLATALSLLVWFIFAPQCISTIAAVRRETNG HHHHHHHEEEECCCCHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC WRYPLIMVGYLFGLAYAASFVTYRIALALGGG CCHHHHHHHHHHHHHHHHHHHHHHHHEEECCC >Mature Secondary Structure TVQASSAAAQPLRIALLGNPNCGKTALFNLLTGARQKVANYAGVTVERKEGHLQTANGR CCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCEECCCCC RVRVLDLPGTYSLNAHSLDEAVTRDIVMGRRAGEPLPDLLVCVTDATHLRLNLRLVLEAR EEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHEEECCCCEEEEEEEEEEEHH ALGLPMVLALNMSDMAERQGITIDREVLSRELGMPVIGTVGVRAGGVRELLQWLDQAQPS HCCCCEEEEECHHHHHHHCCCEECHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHCCCCC ALAAPAAPAPASGDGAQPLVAELHREVRRIMDLAVREPQVSLRRDDRIDAVVLHPVWGLL CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCEEEHHHHHHHH LLAVTLFLMFQAVFSWAEAPMGWIEGATAATAAWINAHMAEGTLRSLLTDGIIAGAGGVV HHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHH VFLPQILILFFFILVLEDSGYLPRAAFLLDRVMGTVGLSGRSFIPLLSSFACAIPGVMAT HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHH RSIPDWRDRLVTIMIAPLMTCSARLPVYALLIAAFIPERTVGGVFNLQGLVLFGLYVGGI CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHH VSAMAVAAVARLARRNAGATPLLMELPAYRWPSLRGLGLGLWERALIFLRRVGGIILAVT HHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH ILLWFLSSFPGAPEGATGPAIEYSFAGRIGSVLAVVFAPIGFNWQISIALVPGMAAREVA HHHHHHHCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHH VGALGTVYALSATGDDAAAQLGPLIAGSWSLATALSLLVWFIFAPQCISTIAAVRRETNG HHHHHHHEEEECCCCHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC WRYPLIMVGYLFGLAYAASFVTYRIALALGGG CCHHHHHHHHHHHHHHHHHHHHHHHHEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Fe (II) [Periplasm] [C]
Specific reaction: Fe (II) [Periplasm] = Fe (II) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA