Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
---|---|
Accession | NC_008752 |
Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is apaH
Identifier: 120609837
GI number: 120609837
Start: 1263299
End: 1264141
Strand: Reverse
Name: apaH
Synonym: Aave_1149
Alternate gene names: 120609837
Gene position: 1264141-1263299 (Counterclockwise)
Preceding gene: 120609843
Following gene: 120609821
Centisome position: 23.62
GC content: 70.7
Gene sequence:
>843_bases ATGGCCCTCTACTGCATTGGCGATATTCAAGGCTGCGACGCGGCGCTGCAGCGCCTGCTCGACACCGTGGATTTCTCCCC CAGCCGCGACACGGTTTATCTGCTGGGAGACCTCGTGAACCGCGGTCCGCAATCGGCGGAAGTGCTGCGGCGCTGTGCCC GGGGCGGCGACAGCCTCCGCGCCCTGCTCGGAAACCACGACCTGCATTTGCTGGCCGCCGCCCACGGCGCGCGCAAGCCG TCACGGCGCGACACCCTCGCCGGGGTGCTGCAGGCACCCGACCGGGATGCGCTGCTGGATTGGCTGAAGCGGCAGCCGCT GGCGCGCGAACACCGGCTGGCGGGCGAACGGCTGCTGATGGTGCACGCGGGCGTGCTGCCCTCCTGGACGGCCGACGCCA CGTTGGAGCACGCCGCCGAAGTGCAGGCAAGGCTCCAGGGCGATGCGCTGCCGGAATTCCTGCAGGCCATGTACGGCAAT GCACCGGACCGGTGGAGCGACGAACTGTCCGGCATGGACCGCTGGCGGGCCATCGTGAACGCGCTGACGCGGCTGCGTTT CTGCACGCCCGACGGCCGCATGGATTTCGACAGCAGCGAGGCGGCGGATGCCGCGCCGGACGGCCTCGTTCCGTGGTTCG ATGCGCCCGGCAGGCGCACGCGCGGCACGCTGGTGGCATTCGGGCATTGGTCCACGCTCGGCTGGATGAACCGGCCGGAC CTGCTGGCGCTGGATACGGGCTGTGTCTGGGGAGGCTGCCTCAGCGCCGTGCGGTTCGGTGCCACGCTGGCCGAGCGCGA GCACATCAGCGTGCGCTGCGAGCAGGCGCAGGCACCTGGCTGA
Upstream 100 bases:
>100_bases TCTCGAATCCCGCCCTCGCCCCGGCCGCCTGCCAGGGCTTTCTCGCTGAATCACAATAGCGCTCTTCCATAAAACGTGCC GCCCACGGCCCCATACTCCC
Downstream 100 bases:
>100_bases GATCCGGGCCCGCCGGAGGCCCGGACGTGCCGCCGGTCACTGGCCGGACGGTGTTTCCACGGCCGGCATGGCGGCCTTGA AGAGCGCGGCGACCTTGCGC
Product: diadenosine tetraphosphatase
Products: NA
Alternate protein names: Ap4A hydrolase; Diadenosine 5',5'''-P1,P4-tetraphosphate pyrophosphohydrolase; Diadenosine tetraphosphatase
Number of amino acids: Translated: 280; Mature: 279
Protein sequence:
>280_residues MALYCIGDIQGCDAALQRLLDTVDFSPSRDTVYLLGDLVNRGPQSAEVLRRCARGGDSLRALLGNHDLHLLAAAHGARKP SRRDTLAGVLQAPDRDALLDWLKRQPLAREHRLAGERLLMVHAGVLPSWTADATLEHAAEVQARLQGDALPEFLQAMYGN APDRWSDELSGMDRWRAIVNALTRLRFCTPDGRMDFDSSEAADAAPDGLVPWFDAPGRRTRGTLVAFGHWSTLGWMNRPD LLALDTGCVWGGCLSAVRFGATLAEREHISVRCEQAQAPG
Sequences:
>Translated_280_residues MALYCIGDIQGCDAALQRLLDTVDFSPSRDTVYLLGDLVNRGPQSAEVLRRCARGGDSLRALLGNHDLHLLAAAHGARKP SRRDTLAGVLQAPDRDALLDWLKRQPLAREHRLAGERLLMVHAGVLPSWTADATLEHAAEVQARLQGDALPEFLQAMYGN APDRWSDELSGMDRWRAIVNALTRLRFCTPDGRMDFDSSEAADAAPDGLVPWFDAPGRRTRGTLVAFGHWSTLGWMNRPD LLALDTGCVWGGCLSAVRFGATLAEREHISVRCEQAQAPG >Mature_279_residues ALYCIGDIQGCDAALQRLLDTVDFSPSRDTVYLLGDLVNRGPQSAEVLRRCARGGDSLRALLGNHDLHLLAAAHGARKPS RRDTLAGVLQAPDRDALLDWLKRQPLAREHRLAGERLLMVHAGVLPSWTADATLEHAAEVQARLQGDALPEFLQAMYGNA PDRWSDELSGMDRWRAIVNALTRLRFCTPDGRMDFDSSEAADAAPDGLVPWFDAPGRRTRGTLVAFGHWSTLGWMNRPDL LALDTGCVWGGCLSAVRFGATLAEREHISVRCEQAQAPG
Specific function: Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
COG id: COG0639
COG function: function code T; Diadenosine tetraphosphatase and related serine/threonine protein phosphatases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Ap4A hydrolase family
Homologues:
Organism=Escherichia coli, GI1786234, Length=260, Percent_Identity=48.0769230769231, Blast_Score=245, Evalue=2e-66,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): APAH_ACIAC (A1TLA3)
Other databases:
- EMBL: CP000512 - RefSeq: YP_969515.1 - ProteinModelPortal: A1TLA3 - SMR: A1TLA3 - STRING: A1TLA3 - GeneID: 4666753 - GenomeReviews: CP000512_GR - KEGG: aav:Aave_1149 - NMPDR: fig|397945.5.peg.999 - eggNOG: COG0639 - HOGENOM: HBG724457 - OMA: LVFGHWA - PhylomeDB: A1TLA3 - ProtClustDB: PRK00166 - BioCyc: AAVE397945:AAVE_1149-MONOMER - HAMAP: MF_00199 - InterPro: IPR004617 - InterPro: IPR004843 - PIRSF: PIRSF000903 - TIGRFAMs: TIGR00668
Pfam domain/function: PF00149 Metallophos
EC number: =3.6.1.41
Molecular weight: Translated: 30655; Mature: 30524
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALYCIGDIQGCDAALQRLLDTVDFSPSRDTVYLLGDLVNRGPQSAEVLRRCARGGDSLR CEEEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEEHHHHHCCCCHHHHHHHHHCCCHHHH ALLGNHDLHLLAAAHGARKPSRRDTLAGVLQAPDRDALLDWLKRQPLAREHRLAGERLLM HHHCCCCEEEEEEHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHCCCEEEE VHAGVLPSWTADATLEHAAEVQARLQGDALPEFLQAMYGNAPDRWSDELSGMDRWRAIVN EECCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH ALTRLRFCTPDGRMDFDSSEAADAAPDGLVPWFDAPGRRTRGTLVAFGHWSTLGWMNRPD HHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHCCCCCCC LLALDTGCVWGGCLSAVRFGATLAEREHISVRCEQAQAPG EEEEECCCHHHHHHHHHHHHHHHHHCHHHEEEECCCCCCC >Mature Secondary Structure ALYCIGDIQGCDAALQRLLDTVDFSPSRDTVYLLGDLVNRGPQSAEVLRRCARGGDSLR EEEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEEHHHHHCCCCHHHHHHHHHCCCHHHH ALLGNHDLHLLAAAHGARKPSRRDTLAGVLQAPDRDALLDWLKRQPLAREHRLAGERLLM HHHCCCCEEEEEEHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHCCCEEEE VHAGVLPSWTADATLEHAAEVQARLQGDALPEFLQAMYGNAPDRWSDELSGMDRWRAIVN EECCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH ALTRLRFCTPDGRMDFDSSEAADAAPDGLVPWFDAPGRRTRGTLVAFGHWSTLGWMNRPD HHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHCCCCCCC LLALDTGCVWGGCLSAVRFGATLAEREHISVRCEQAQAPG EEEEECCCHHHHHHHHHHHHHHHHHCHHHEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA