Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120609821
Identifier: 120609821
GI number: 120609821
Start: 1242549
End: 1243139
Strand: Reverse
Name: 120609821
Synonym: Aave_1131
Alternate gene names: NA
Gene position: 1243139-1242549 (Counterclockwise)
Preceding gene: 120609837
Following gene: 120609820
Centisome position: 23.22
GC content: 69.2
Gene sequence:
>591_bases ATGCAAGCCCCGTGCCGTACCGGTGCGCGGAATGCTGCTCCGGTGCCCTCTATCATCCGAAGAGTTCTTCCGGTCTCCAT CGGGCCTTTCACCGACGACACCATGGTTCCCTCTCCGTACCGCGGTGCCCTGCTGCCCCGCTTCGTCCTGTGCTCGGCCC TGTGCGCCGCTGCCGTTCATGCAGGATCCGCCCCTGCCCTGCCCCCGGCCCAGGAAGACCAGCGCCGCACGGAAGCCCGC CCCTACCCGCACGCGCTCGGCCCGGTCCAGGGCATCCGGATCCGCAGCACGCGCTACTTCGATGCCGACAACCGGCCCTG CGCCGCGCCGCCGCCGAAGTCCCGCGCGGTCACGCCCCGCCATGTGCGGACGTTCCTGCGCAAGGCCGTCCCGGTGTCGC AGATCGACGTGATGAACTATCACGGCGCGTTCGGCGAATGCATGAGCGACTGGGTGGACGTGACGTTCGCCGATGGACGG CGCGTGCGGATGACCTTCGCGGCAGACAGCGGCGTGGCCTACCTCGCGCCCCTGGTGGACGGGAAGGAAGGCGAGGTGTA TTTCTACGTCTGCGAGGACTGCGGCCGCTAG
Upstream 100 bases:
>100_bases CGCACCGGCGGCAGCTGGCGGCATGGGGGGAGCATTCATGCGGGCGATTGTCTCTTGGATTGAATCGGGCGGCGCAGAAA GAAGAGCGCCCGGCGGTACC
Downstream 100 bases:
>100_bases CGGGAGCGCGGGCGGTGGCATCGAATTTGCGGTGGCAGGCGGTGCCGGGACCGGTTACGCTTCGAGTCCATGGCCCCCAT GCCCCGTCCCGGCTGCCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 196; Mature: 196
Protein sequence:
>196_residues MQAPCRTGARNAAPVPSIIRRVLPVSIGPFTDDTMVPSPYRGALLPRFVLCSALCAAAVHAGSAPALPPAQEDQRRTEAR PYPHALGPVQGIRIRSTRYFDADNRPCAAPPPKSRAVTPRHVRTFLRKAVPVSQIDVMNYHGAFGECMSDWVDVTFADGR RVRMTFAADSGVAYLAPLVDGKEGEVYFYVCEDCGR
Sequences:
>Translated_196_residues MQAPCRTGARNAAPVPSIIRRVLPVSIGPFTDDTMVPSPYRGALLPRFVLCSALCAAAVHAGSAPALPPAQEDQRRTEAR PYPHALGPVQGIRIRSTRYFDADNRPCAAPPPKSRAVTPRHVRTFLRKAVPVSQIDVMNYHGAFGECMSDWVDVTFADGR RVRMTFAADSGVAYLAPLVDGKEGEVYFYVCEDCGR >Mature_196_residues MQAPCRTGARNAAPVPSIIRRVLPVSIGPFTDDTMVPSPYRGALLPRFVLCSALCAAAVHAGSAPALPPAQEDQRRTEAR PYPHALGPVQGIRIRSTRYFDADNRPCAAPPPKSRAVTPRHVRTFLRKAVPVSQIDVMNYHGAFGECMSDWVDVTFADGR RVRMTFAADSGVAYLAPLVDGKEGEVYFYVCEDCGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21358; Mature: 21358
Theoretical pI: Translated: 8.88; Mature: 8.88
Prosite motif: PS01140 GLYCOSYL_HYDROL_F45
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQAPCRTGARNAAPVPSIIRRVLPVSIGPFTDDTMVPSPYRGALLPRFVLCSALCAAAVH CCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH AGSAPALPPAQEDQRRTEARPYPHALGPVQGIRIRSTRYFDADNRPCAAPPPKSRAVTPR CCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCEEEECEEEECCCCCCCCCCCCCCCCCCHH HVRTFLRKAVPVSQIDVMNYHGAFGECMSDWVDVTFADGRRVRMTFAADSGVAYLAPLVD HHHHHHHHCCCHHHEEHHHCCCHHHHHHHHHHEEEECCCCEEEEEEECCCCCEEEEEECC GKEGEVYFYVCEDCGR CCCCCEEEEEECCCCC >Mature Secondary Structure MQAPCRTGARNAAPVPSIIRRVLPVSIGPFTDDTMVPSPYRGALLPRFVLCSALCAAAVH CCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH AGSAPALPPAQEDQRRTEARPYPHALGPVQGIRIRSTRYFDADNRPCAAPPPKSRAVTPR CCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCEEEECEEEECCCCCCCCCCCCCCCCCCHH HVRTFLRKAVPVSQIDVMNYHGAFGECMSDWVDVTFADGRRVRMTFAADSGVAYLAPLVD HHHHHHHHCCCHHHEEHHHCCCHHHHHHHHHHEEEECCCCEEEEEEECCCCCEEEEEECC GKEGEVYFYVCEDCGR CCCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA