Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
---|---|
Accession | NC_008752 |
Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is 120609827
Identifier: 120609827
GI number: 120609827
Start: 1249531
End: 1250865
Strand: Direct
Name: 120609827
Synonym: Aave_1137
Alternate gene names: NA
Gene position: 1249531-1250865 (Clockwise)
Preceding gene: 120609826
Following gene: 120609828
Centisome position: 23.34
GC content: 70.71
Gene sequence:
>1335_bases ATGGACAGTTCCGCGTCCGGCTGCACAATGGAACCTGTGCCGGTTCCGATGCTCCATGCCCGAAAGGGCGCCGGGCCGCA CGGCCCTGTGGGGCTGCCGGGCGCATGCCGCGTCCGCTGCCCGCCCGCCAGCCCATCGCATGCCATGACAGACCATTCCC TCGACGCCCACTCCCTCGCGCTGATCGATGCCTGTTCGGAAGCCTCCCTCGCGCTGCTCGAACGCAACCTCACGCCCCAC GGCATCCTGGCCGCGAGCCGCACCGCGGCGGCGGTGGCCCGGCGCTACACGCGGATCTTCGGGCGCGACGCGGCCATGTG CGTCATGGCGATGTGCGGCACCGGCGTGCCGTCCCTGGAAGAGGGCGCCGTGGCCAGCCTCGACGCGCTGGCCTCGCAGC AGGCTCCCAACGGGCAGATTCCCAAGTACGTGGACCCGGAAGGCCGCGACGCGGACTTCTGGTACCTGGGCTGCATCGAC GCCACTCTGTGGTGGCTGATCGCGGTGGACCACGTGCGCCGCCACGGCGCGGTGGAGGGGGACCGCTGGGCGGATGGCGT CGAGCGCGCCATCGGCTGGCTGCTCGCGCAGGAGCACCAGCATTTCCGGCTGCTGCAGCAGAACGAGGCCAGCGACTGGG CGGACATCATGCCGCGCTCGGGGTACGTGCTCTACACCAACGCCCTGTGGTTCGACGTCAAGCGCCGCTTCTCGCTCTGC CAGGCGGACGACACGCACCACCACTTCAACCATCTCTTCAACCCGTTCCAGCGCGACCTGCCCGAATACCACCGCGCCCG GCTGCTGCAGCACTACGCCCGGCGCGGCCGGCGCGACCCGGGCCTGTTCCTGAGCTTCGTGAACCTGGCGGTGGTGGGCG ACGAGGGCGATGTGTTCGGCAACCTGCTGGCCATCCAGTCCGGCCTCGCCGACGAGGCGATGGCGCACAGCATCGTCAAC ACCATCGAGGCCGCCCATGCGGGCAGCTCCCTGCCCGTGCGCGTCGTGCTGCATCCGCTGTCCCACGAGCACGACCTGTG GCGGGCCTACATGGGCCGGCACCGCCAGAACCTCATGCACCAGTACCACAACGGCGGCATCTGGCCCTTCGTCGGCGGCT TCTGGGTGATGGCGCTGGCCCGCCTGGGCCTGCGCCGCGCCGGCTGGACCGAACTGGCGAAGCTGGCCCACGCCAATGCG CTCGACGACTGGCGCTTCACCGAGTGGTTCCACGGCCGCACGCTGGTGCCCATGGGCATGGCGGGCCAGAGCTGGAACGC GGCCACCTTCCTGCTGGCCCGGCGCGCGCTGCAGGGGCTCGATTCCGCCTGGTAG
Upstream 100 bases:
>100_bases CAAGGCTTCTTCCGCCTACCGCCGCTACCTGCGCGGCTGCGGCATCACCTTCGGCACCTGCTGAGGCGTTGCCGGGCGAG CCCGGCCGCGGACCAGGGGG
Downstream 100 bases:
>100_bases CCCGCGCCCCCCGGGGCGCCTTATGCTCTGCGCTGCGCGCATCCGTGCCGCCCTTCCTCCCCAAAGGCTCCCCATGACCG ATTCCCCTACCGCACCCCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 444; Mature: 444
Protein sequence:
>444_residues MDSSASGCTMEPVPVPMLHARKGAGPHGPVGLPGACRVRCPPASPSHAMTDHSLDAHSLALIDACSEASLALLERNLTPH GILAASRTAAAVARRYTRIFGRDAAMCVMAMCGTGVPSLEEGAVASLDALASQQAPNGQIPKYVDPEGRDADFWYLGCID ATLWWLIAVDHVRRHGAVEGDRWADGVERAIGWLLAQEHQHFRLLQQNEASDWADIMPRSGYVLYTNALWFDVKRRFSLC QADDTHHHFNHLFNPFQRDLPEYHRARLLQHYARRGRRDPGLFLSFVNLAVVGDEGDVFGNLLAIQSGLADEAMAHSIVN TIEAAHAGSSLPVRVVLHPLSHEHDLWRAYMGRHRQNLMHQYHNGGIWPFVGGFWVMALARLGLRRAGWTELAKLAHANA LDDWRFTEWFHGRTLVPMGMAGQSWNAATFLLARRALQGLDSAW
Sequences:
>Translated_444_residues MDSSASGCTMEPVPVPMLHARKGAGPHGPVGLPGACRVRCPPASPSHAMTDHSLDAHSLALIDACSEASLALLERNLTPH GILAASRTAAAVARRYTRIFGRDAAMCVMAMCGTGVPSLEEGAVASLDALASQQAPNGQIPKYVDPEGRDADFWYLGCID ATLWWLIAVDHVRRHGAVEGDRWADGVERAIGWLLAQEHQHFRLLQQNEASDWADIMPRSGYVLYTNALWFDVKRRFSLC QADDTHHHFNHLFNPFQRDLPEYHRARLLQHYARRGRRDPGLFLSFVNLAVVGDEGDVFGNLLAIQSGLADEAMAHSIVN TIEAAHAGSSLPVRVVLHPLSHEHDLWRAYMGRHRQNLMHQYHNGGIWPFVGGFWVMALARLGLRRAGWTELAKLAHANA LDDWRFTEWFHGRTLVPMGMAGQSWNAATFLLARRALQGLDSAW >Mature_444_residues MDSSASGCTMEPVPVPMLHARKGAGPHGPVGLPGACRVRCPPASPSHAMTDHSLDAHSLALIDACSEASLALLERNLTPH GILAASRTAAAVARRYTRIFGRDAAMCVMAMCGTGVPSLEEGAVASLDALASQQAPNGQIPKYVDPEGRDADFWYLGCID ATLWWLIAVDHVRRHGAVEGDRWADGVERAIGWLLAQEHQHFRLLQQNEASDWADIMPRSGYVLYTNALWFDVKRRFSLC QADDTHHHFNHLFNPFQRDLPEYHRARLLQHYARRGRRDPGLFLSFVNLAVVGDEGDVFGNLLAIQSGLADEAMAHSIVN TIEAAHAGSSLPVRVVLHPLSHEHDLWRAYMGRHRQNLMHQYHNGGIWPFVGGFWVMALARLGLRRAGWTELAKLAHANA LDDWRFTEWFHGRTLVPMGMAGQSWNAATFLLARRALQGLDSAW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49203; Mature: 49203
Theoretical pI: Translated: 7.19; Mature: 7.19
Prosite motif: PS00334 MYB_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSSASGCTMEPVPVPMLHARKGAGPHGPVGLPGACRVRCPPASPSHAMTDHSLDAHSLA CCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHH LIDACSEASLALLERNLTPHGILAASRTAAAVARRYTRIFGRDAAMCVMAMCGTGVPSLE HHHHHCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCC EGAVASLDALASQQAPNGQIPKYVDPEGRDADFWYLGCIDATLWWLIAVDHVRRHGAVEG CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCC DRWADGVERAIGWLLAQEHQHFRLLQQNEASDWADIMPRSGYVLYTNALWFDVKRRFSLC HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCEEEEECHHHHHHHHHHHHH QADDTHHHFNHLFNPFQRDLPEYHRARLLQHYARRGRRDPGLFLSFVNLAVVGDEGDVFG CCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHEEHEEEEECCCCCHHH NLLAIQSGLADEAMAHSIVNTIEAAHAGSSLPVRVVLHPLSHEHDLWRAYMGRHRQNLMH HHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH QYHNGGIWPFVGGFWVMALARLGLRRAGWTELAKLAHANALDDWRFTEWFHGRTLVPMGM HHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHHCCCEEEECCC AGQSWNAATFLLARRALQGLDSAW CCCCCCHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MDSSASGCTMEPVPVPMLHARKGAGPHGPVGLPGACRVRCPPASPSHAMTDHSLDAHSLA CCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHH LIDACSEASLALLERNLTPHGILAASRTAAAVARRYTRIFGRDAAMCVMAMCGTGVPSLE HHHHHCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCC EGAVASLDALASQQAPNGQIPKYVDPEGRDADFWYLGCIDATLWWLIAVDHVRRHGAVEG CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCC DRWADGVERAIGWLLAQEHQHFRLLQQNEASDWADIMPRSGYVLYTNALWFDVKRRFSLC HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCEEEEECHHHHHHHHHHHHH QADDTHHHFNHLFNPFQRDLPEYHRARLLQHYARRGRRDPGLFLSFVNLAVVGDEGDVFG CCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHEEHEEEEECCCCCHHH NLLAIQSGLADEAMAHSIVNTIEAAHAGSSLPVRVVLHPLSHEHDLWRAYMGRHRQNLMH HHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH QYHNGGIWPFVGGFWVMALARLGLRRAGWTELAKLAHANALDDWRFTEWFHGRTLVPMGM HHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHHCCCEEEECCC AGQSWNAATFLLARRALQGLDSAW CCCCCCHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA