Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is cbaA [H]
Identifier: 120609826
GI number: 120609826
Start: 1248373
End: 1249494
Strand: Direct
Name: cbaA [H]
Synonym: Aave_1136
Alternate gene names: 120609826
Gene position: 1248373-1249494 (Clockwise)
Preceding gene: 120609825
Following gene: 120609827
Centisome position: 23.32
GC content: 71.93
Gene sequence:
>1122_bases ATGCTGCGCAACAGCTCGCCGCCCTGGCATCCCCCGTGCTTGCCCTTATGCTTTCCGCGCGGGGCGGCCCTTGCGGCCCG TCCCGCGGACCACAGCCACTTTCCCACGATGATCGAACACCACCATTGGCACCCCGTCGCCTCGGCCTGCGACCTGGGGG CCGCGCCGCTCGCGGCGCACCTGCTCGGGCAGCCGCTCGTCCTCTGGCGGGGCGATGCCGGCCGTGCCCATGCCTTCGTC GACCGCTGCCCGCACCGCGGCGCGCGCCTGTCGCTCGGCCGCGTGGAAGGTGGCCGGCTCGAATGTCCCTACCACGGCTG GCAGTTCGAGGGCCGCGGGCGCTGCGTGCACGTGCCGGCGCTGCCGCAGTTCCAGCCGCCGGCCGGGCACCGCGCGGGCG CCTTCGACGTGCAGGAAGCGCATGGGCTGCTCTGGGTGCGGCTGGCCGCCGGGCCGCAAGGCGAGGGCGAGGGTGACGCC ATTGCTGCCGGGCTTCCGCTACCCGCCTTCGCCGCCGAGAGCGACGCGCGCCTGCGCAAGCTCAACTGCGGCCCGTACGA CGTGGCGGCCAGCGCGCCGCGCATCGTCGAGAACTTTCTCGACATGTCCCACTTCGGCTTCGTGCACGAAGGCTGGCTGG GCGCGCGCGATGCCGCGGCCATCGACGACTACCGCGTGGAGCCGACGCCGACCGGCCTGCTGGCCACCGGTTGCAAGGCC TGGCAGCCCCAGTCCAACCTGCATTCCACCACGGCGGCGCAGGTCGAATACACCTACGAAGTGACTGGCCCGTACGCGGC CGTGCTGACCAAGCTGCCGGAATCCGGCACCACGGCGGTGGAGGGCTGGCGCGAATCCATCGCGCTCTACATCTGCCCCG TCACGCCGGAGTCGAGCCGCGTGTGGTTCCGGCTGGCGGTCGCGGACTTCGATTCGCCGGACGCCAGGTTGCGCGATTTC CAGCACACCATCTTCACGCAGGACCAGCCGGTGCTCGAATCCCAGGAGCCCAGGCGCCTGCCCCTGGACCTGCGGGCGGA ACTGCACACCGCCGCGGACAAGGCTTCTTCCGCCTACCGCCGCTACCTGCGCGGCTGCGGCATCACCTTCGGCACCTGCT GA
Upstream 100 bases:
>100_bases CGGAACAGATCGGGCAGGCCCAGCAGGACCCTTCACGCCGGACTCGTCCAGCGTGGGCATGTCGGGCAGCAGGGGGATGC GCTTCGCACCGCTCACGGCC
Downstream 100 bases:
>100_bases GGCGTTGCCGGGCGAGCCCGGCCGCGGACCAGGGGGATGGACAGTTCCGCGTCCGGCTGCACAATGGAACCTGTGCCGGT TCCGATGCTCCATGCCCGAA
Product: Rieske (2Fe-2S) domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 373; Mature: 373
Protein sequence:
>373_residues MLRNSSPPWHPPCLPLCFPRGAALAARPADHSHFPTMIEHHHWHPVASACDLGAAPLAAHLLGQPLVLWRGDAGRAHAFV DRCPHRGARLSLGRVEGGRLECPYHGWQFEGRGRCVHVPALPQFQPPAGHRAGAFDVQEAHGLLWVRLAAGPQGEGEGDA IAAGLPLPAFAAESDARLRKLNCGPYDVAASAPRIVENFLDMSHFGFVHEGWLGARDAAAIDDYRVEPTPTGLLATGCKA WQPQSNLHSTTAAQVEYTYEVTGPYAAVLTKLPESGTTAVEGWRESIALYICPVTPESSRVWFRLAVADFDSPDARLRDF QHTIFTQDQPVLESQEPRRLPLDLRAELHTAADKASSAYRRYLRGCGITFGTC
Sequences:
>Translated_373_residues MLRNSSPPWHPPCLPLCFPRGAALAARPADHSHFPTMIEHHHWHPVASACDLGAAPLAAHLLGQPLVLWRGDAGRAHAFV DRCPHRGARLSLGRVEGGRLECPYHGWQFEGRGRCVHVPALPQFQPPAGHRAGAFDVQEAHGLLWVRLAAGPQGEGEGDA IAAGLPLPAFAAESDARLRKLNCGPYDVAASAPRIVENFLDMSHFGFVHEGWLGARDAAAIDDYRVEPTPTGLLATGCKA WQPQSNLHSTTAAQVEYTYEVTGPYAAVLTKLPESGTTAVEGWRESIALYICPVTPESSRVWFRLAVADFDSPDARLRDF QHTIFTQDQPVLESQEPRRLPLDLRAELHTAADKASSAYRRYLRGCGITFGTC >Mature_373_residues MLRNSSPPWHPPCLPLCFPRGAALAARPADHSHFPTMIEHHHWHPVASACDLGAAPLAAHLLGQPLVLWRGDAGRAHAFV DRCPHRGARLSLGRVEGGRLECPYHGWQFEGRGRCVHVPALPQFQPPAGHRAGAFDVQEAHGLLWVRLAAGPQGEGEGDA IAAGLPLPAFAAESDARLRKLNCGPYDVAASAPRIVENFLDMSHFGFVHEGWLGARDAAAIDDYRVEPTPTGLLATGCKA WQPQSNLHSTTAAQVEYTYEVTGPYAAVLTKLPESGTTAVEGWRESIALYICPVTPESSRVWFRLAVADFDSPDARLRDF QHTIFTQDQPVLESQEPRRLPLDLRAELHTAADKASSAYRRYLRGCGITFGTC
Specific function: Unknown
COG id: COG4638
COG function: function code PR; Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Rieske domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017941 - InterPro: IPR015881 [H]
Pfam domain/function: PF00355 Rieske [H]
EC number: 1.14.1.- [C]
Molecular weight: Translated: 40681; Mature: 40681
Theoretical pI: Translated: 6.92; Mature: 6.92
Prosite motif: PS00570 RING_HYDROXYL_ALPHA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRNSSPPWHPPCLPLCFPRGAALAARPADHSHFPTMIEHHHWHPVASACDLGAAPLAAH CCCCCCCCCCCCCCCEECCCCCCEEECCCCCCCCCHHHHCCCCCCHHHHHCCCCHHHHHH LLGQPLVLWRGDAGRAHAFVDRCPHRGARLSLGRVEGGRLECPYHGWQFEGRGRCVHVPA HHCCCEEEEECCCCCHHHHHHHCCCCCCEEEEEECCCCEEECCCCCEEECCCCCEEECCC LPQFQPPAGHRAGAFDVQEAHGLLWVRLAAGPQGEGEGDAIAAGLPLPAFAAESDARLRK CCCCCCCCCCCCCCCCHHHCCCEEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCEEE LNCGPYDVAASAPRIVENFLDMSHFGFVHEGWLGARDAAAIDDYRVEPTPTGLLATGCKA CCCCCCCHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCCCHHCCCCCC WQPQSNLHSTTAAQVEYTYEVTGPYAAVLTKLPESGTTAVEGWRESIALYICPVTPESSR CCCCCCCCCCEEEEEEEEEEECCCHHHHHHHCCCCCCHHHHHHCCCEEEEEEECCCCCCC VWFRLAVADFDSPDARLRDFQHTIFTQDQPVLESQEPRRLPLDLRAELHTAADKASSAYR EEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH RYLRGCGITFGTC HHHHHCCCCCCCC >Mature Secondary Structure MLRNSSPPWHPPCLPLCFPRGAALAARPADHSHFPTMIEHHHWHPVASACDLGAAPLAAH CCCCCCCCCCCCCCCEECCCCCCEEECCCCCCCCCHHHHCCCCCCHHHHHCCCCHHHHHH LLGQPLVLWRGDAGRAHAFVDRCPHRGARLSLGRVEGGRLECPYHGWQFEGRGRCVHVPA HHCCCEEEEECCCCCHHHHHHHCCCCCCEEEEEECCCCEEECCCCCEEECCCCCEEECCC LPQFQPPAGHRAGAFDVQEAHGLLWVRLAAGPQGEGEGDAIAAGLPLPAFAAESDARLRK CCCCCCCCCCCCCCCCHHHCCCEEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCEEE LNCGPYDVAASAPRIVENFLDMSHFGFVHEGWLGARDAAAIDDYRVEPTPTGLLATGCKA CCCCCCCHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCCCHHCCCCCC WQPQSNLHSTTAAQVEYTYEVTGPYAAVLTKLPESGTTAVEGWRESIALYICPVTPESSR CCCCCCCCCCEEEEEEEEEEECCCHHHHHHHCCCCCCHHHHHHCCCEEEEEEECCCCCCC VWFRLAVADFDSPDARLRDFQHTIFTQDQPVLESQEPRRLPLDLRAELHTAADKASSAYR EEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH RYLRGCGITFGTC HHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7704279 [H]