Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

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The map label for this gene is piv [H]

Identifier: 120609806

GI number: 120609806

Start: 1222127

End: 1223077

Strand: Reverse

Name: piv [H]

Synonym: Aave_1115

Alternate gene names: 120609806

Gene position: 1223077-1222127 (Counterclockwise)

Preceding gene: 120609808

Following gene: 120609805

Centisome position: 22.85

GC content: 66.77

Gene sequence:

>951_bases
ATGAGTGAACTCGTCTACGTGGGCATCGATATCGCCAAGAACAGCTTCGAAGTGGCTGTCACGGGCGAACTGCAGACGCT
CAATCTGGCCAACGACGAAGCCGGCCATGCCCAGCTGTGCCAATGCCTCGCACCGCTGGCGCCCAGGCTCATCCTGATGG
AGGCCACCGGCGGCTATGAGCAAGACCTCGCGCTGGCCTTGGCGGGCGCGGGCTTGCGCGTGTCGGTGGTCAACCCTCGC
CAGGCACGCGACTTCGCGCGCTGCGTGGGCAAGCTGGCCAAGACCGACCGCATCGACGCGCAAGCTCTGCGCAGCTTTGC
CTCGATGCTCGATGCGCAAGGCCACCAGCCTCGTGCCCTGGCCGACGACGAGCGCCGCGAGCTCACGGCCCTGGTGGTGC
GCCGCAGGCAACTGCTGACCATGCTGGTGTCCGAGCGCCAGCGCCTGGGCGTGGCCCACCGCAAGGCCAAGCCCAGCATC
CTGGCGATCATGGATGCCATCGCGGCGCAATTGCACGATGTCGATGACGAGCTCAAGGCGCATGTCCAGACTCACCACGC
CGACCTGGCCAAACTGCTGACCTCGGTCAAGGGCGTGGGGCCGACGACCGCCTGCACGCTGCTGGCGCAACTTCCCGAAC
TCGGCCAGCTCAATCGCAAGCAGATCACGGCCCTGGTCGGTCTGGCGCCCATGAACCGCGACTCGGGCACGCTCAGGGGC
CAGCGCCACATCTTCGGTGGCCGCGCCGACGTGCGGCGCGTGCTCTACGTCGCAGCCTTGGTCGGCACGCGCTTCAACCC
CGTCCTCAAGGCGTTCTACGCCAAGCTGCTGGCCGCGGGCAAAGCCAAGAAGGTCGCCCTCGTGGCCTGCATGCACAAGC
TGCTGGTCATCCTGAACGCGATCGCTCGCACCAGGTCGCCCTGGCGCGATGACTTTGCTGAGCGTCTTTGA

Upstream 100 bases:

>100_bases
CAGCCCAGGGCGCACGGTGGTGGTCCCTTTGTTCTGCCGCATCCCGAATGGTTGACCGAACACATTTCGTATTCGTAAGG
CTGGGAGTTGGAGAACCGCT

Downstream 100 bases:

>100_bases
GCTAGTCATTCAAGATGGTTGCTGTCTGTGTCCGGATCCGTGTGAAAAAGCGCGCTCGCGCGCCACGCAGCAGTGTATGC
ACGCTCCATGCCTCGCTGGC

Product: transposase IS116/IS110/IS902 family protein

Products: NA

Alternate protein names: PIVML [H]

Number of amino acids: Translated: 316; Mature: 315

Protein sequence:

>316_residues
MSELVYVGIDIAKNSFEVAVTGELQTLNLANDEAGHAQLCQCLAPLAPRLILMEATGGYEQDLALALAGAGLRVSVVNPR
QARDFARCVGKLAKTDRIDAQALRSFASMLDAQGHQPRALADDERRELTALVVRRRQLLTMLVSERQRLGVAHRKAKPSI
LAIMDAIAAQLHDVDDELKAHVQTHHADLAKLLTSVKGVGPTTACTLLAQLPELGQLNRKQITALVGLAPMNRDSGTLRG
QRHIFGGRADVRRVLYVAALVGTRFNPVLKAFYAKLLAAGKAKKVALVACMHKLLVILNAIARTRSPWRDDFAERL

Sequences:

>Translated_316_residues
MSELVYVGIDIAKNSFEVAVTGELQTLNLANDEAGHAQLCQCLAPLAPRLILMEATGGYEQDLALALAGAGLRVSVVNPR
QARDFARCVGKLAKTDRIDAQALRSFASMLDAQGHQPRALADDERRELTALVVRRRQLLTMLVSERQRLGVAHRKAKPSI
LAIMDAIAAQLHDVDDELKAHVQTHHADLAKLLTSVKGVGPTTACTLLAQLPELGQLNRKQITALVGLAPMNRDSGTLRG
QRHIFGGRADVRRVLYVAALVGTRFNPVLKAFYAKLLAAGKAKKVALVACMHKLLVILNAIARTRSPWRDDFAERL
>Mature_315_residues
SELVYVGIDIAKNSFEVAVTGELQTLNLANDEAGHAQLCQCLAPLAPRLILMEATGGYEQDLALALAGAGLRVSVVNPRQ
ARDFARCVGKLAKTDRIDAQALRSFASMLDAQGHQPRALADDERRELTALVVRRRQLLTMLVSERQRLGVAHRKAKPSIL
AIMDAIAAQLHDVDDELKAHVQTHHADLAKLLTSVKGVGPTTACTLLAQLPELGQLNRKQITALVGLAPMNRDSGTLRGQ
RHIFGGRADVRRVLYVAALVGTRFNPVLKAFYAKLLAAGKAKKVALVACMHKLLVILNAIARTRSPWRDDFAERL

Specific function: May be the site-specific invertase required for pilin gene inversion. Moraxella can express either a Q or I pilin; the inversion of 2 kb of DNA determines which pilin is expressed [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003346
- InterPro:   IPR002525 [H]

Pfam domain/function: PF02371 Transposase_20; PF01548 Transposase_9 [H]

EC number: NA

Molecular weight: Translated: 34389; Mature: 34257

Theoretical pI: Translated: 10.39; Mature: 10.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSELVYVGIDIAKNSFEVAVTGELQTLNLANDEAGHAQLCQCLAPLAPRLILMEATGGYE
CCCEEEEEEEEECCCEEEEEECCEEEEECCCCCCCHHHHHHHHHHHCCEEEEEECCCCCH
QDLALALAGAGLRVSVVNPRQARDFARCVGKLAKTDRIDAQALRSFASMLDAQGHQPRAL
HHHHHHEECCCEEEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCC
ADDERRELTALVVRRRQLLTMLVSERQRLGVAHRKAKPSILAIMDAIAAQLHDVDDELKA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCHHHHHHHHHHHHHHCCHHHHHH
HVQTHHADLAKLLTSVKGVGPTTACTLLAQLPELGQLNRKQITALVGLAPMNRDSGTLRG
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHCCCCHHHHHHHHHCCCCCCCCCCCCC
QRHIFGGRADVRRVLYVAALVGTRFNPVLKAFYAKLLAAGKAKKVALVACMHKLLVILNA
CHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
IARTRSPWRDDFAERL
HHHCCCCHHHHHHHCC
>Mature Secondary Structure 
SELVYVGIDIAKNSFEVAVTGELQTLNLANDEAGHAQLCQCLAPLAPRLILMEATGGYE
CCEEEEEEEEECCCEEEEEECCEEEEECCCCCCCHHHHHHHHHHHCCEEEEEECCCCCH
QDLALALAGAGLRVSVVNPRQARDFARCVGKLAKTDRIDAQALRSFASMLDAQGHQPRAL
HHHHHHEECCCEEEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCC
ADDERRELTALVVRRRQLLTMLVSERQRLGVAHRKAKPSILAIMDAIAAQLHDVDDELKA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCHHHHHHHHHHHHHHCCHHHHHH
HVQTHHADLAKLLTSVKGVGPTTACTLLAQLPELGQLNRKQITALVGLAPMNRDSGTLRG
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHCCCCHHHHHHHHHCCCCCCCCCCCCC
QRHIFGGRADVRRVLYVAALVGTRFNPVLKAFYAKLLAAGKAKKVALVACMHKLLVILNA
CHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
IARTRSPWRDDFAERL
HHHCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2403542 [H]