Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120609749
Identifier: 120609749
GI number: 120609749
Start: 1157655
End: 1158329
Strand: Direct
Name: 120609749
Synonym: Aave_1056
Alternate gene names: NA
Gene position: 1157655-1158329 (Clockwise)
Preceding gene: 120609748
Following gene: 120609751
Centisome position: 21.63
GC content: 54.22
Gene sequence:
>675_bases ATGATACTGAAGGTAGTCATTCAATCAATGAAATCCTTCATGATCAATACTTCCATCAAAACAACTGGCAACCATAAAAT CTACTCGTCTTCTACCCAAGAGCCACAACGCCATGCACCGCAAGCAGACGCAGGTTCTGCTTCCAAACTGATCCATCCTG CATTGCAGGGTCTGCCATCGATCCCGCACGGGGGGGCAGCCCCACGGCAGGCGCTGGTCAACTCACCGCTTGCCGAGCAT GCACGGCGCAGCGAGGCTTTCAAGGCACAACGCCAAGCTATTGCCATGCAACCCGGTCCGTCCAACCACCCGCACCTCAT TGCCCTCGACAAGCTCGAGGCGCGTGGATTCGAGCCGGCAGCCGGGGGGATAAAAATTCCTCTTACGCCCAATTCGCTTC CCGGTGGTGGCAAGCGAGTCCAGACAGTTGGCACTTCATCGCGGGATGTCCATGTTGTTCCTGCCGGAATTGCTCCGCAA CTTAGGGAAGCCATACAAGATAAGCAATTGATGATTCAGACGCTGACTCAAGAACTGGCACAAGCAGAAGAGGAGGGTAA TCCAGCTGAAATAGCACAGAACCAGCGACTGTTGGCCCAAGCTCGTCAAGATTTGGCTGGGTACATGAGGCAAGCCGCTG TATACGGAGAAGAGAGTCGTCGGATTAACCGTTGA
Upstream 100 bases:
>100_bases TGCGCGAAACACTGATCCGCTGTTCTTGATTTCAAATCTGATGCGATTCGGAATGGTGGAAAAATCTTCGCTCTTCGTTC ACTGAAATTTCCATATTGGA
Downstream 100 bases:
>100_bases ATTTGAAGGAGTCCTGACCTGACCACTGCAGCCTTTTCCATCATTGGGGAAGGGTTTGCAGTGCACCCAGGTCATTGATT CTGCATTGACGACAGGTGGC
Product: outer protein O
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 224; Mature: 224
Protein sequence:
>224_residues MILKVVIQSMKSFMINTSIKTTGNHKIYSSSTQEPQRHAPQADAGSASKLIHPALQGLPSIPHGGAAPRQALVNSPLAEH ARRSEAFKAQRQAIAMQPGPSNHPHLIALDKLEARGFEPAAGGIKIPLTPNSLPGGGKRVQTVGTSSRDVHVVPAGIAPQ LREAIQDKQLMIQTLTQELAQAEEEGNPAEIAQNQRLLAQARQDLAGYMRQAAVYGEESRRINR
Sequences:
>Translated_224_residues MILKVVIQSMKSFMINTSIKTTGNHKIYSSSTQEPQRHAPQADAGSASKLIHPALQGLPSIPHGGAAPRQALVNSPLAEH ARRSEAFKAQRQAIAMQPGPSNHPHLIALDKLEARGFEPAAGGIKIPLTPNSLPGGGKRVQTVGTSSRDVHVVPAGIAPQ LREAIQDKQLMIQTLTQELAQAEEEGNPAEIAQNQRLLAQARQDLAGYMRQAAVYGEESRRINR >Mature_224_residues MILKVVIQSMKSFMINTSIKTTGNHKIYSSSTQEPQRHAPQADAGSASKLIHPALQGLPSIPHGGAAPRQALVNSPLAEH ARRSEAFKAQRQAIAMQPGPSNHPHLIALDKLEARGFEPAAGGIKIPLTPNSLPGGGKRVQTVGTSSRDVHVVPAGIAPQ LREAIQDKQLMIQTLTQELAQAEEEGNPAEIAQNQRLLAQARQDLAGYMRQAAVYGEESRRINR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24112; Mature: 24112
Theoretical pI: Translated: 10.55; Mature: 10.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILKVVIQSMKSFMINTSIKTTGNHKIYSSSTQEPQRHAPQADAGSASKLIHPALQGLPS CHHHHHHHHHHHHHHHCCEEECCCCEEECCCCCCHHHHCCCCCCCCHHHHHHHHHHCCCC IPHGGAAPRQALVNSPLAEHARRSEAFKAQRQAIAMQPGPSNHPHLIALDKLEARGFEPA CCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCEEEEEECHHCCCCCCC AGGIKIPLTPNSLPGGGKRVQTVGTSSRDVHVVPAGIAPQLREAIQDKQLMIQTLTQELA CCCEEEECCCCCCCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH QAEEEGNPAEIAQNQRLLAQARQDLAGYMRQAAVYGEESRRINR HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCC >Mature Secondary Structure MILKVVIQSMKSFMINTSIKTTGNHKIYSSSTQEPQRHAPQADAGSASKLIHPALQGLPS CHHHHHHHHHHHHHHHCCEEECCCCEEECCCCCCHHHHCCCCCCCCHHHHHHHHHHCCCC IPHGGAAPRQALVNSPLAEHARRSEAFKAQRQAIAMQPGPSNHPHLIALDKLEARGFEPA CCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCEEEEEECHHCCCCCCC AGGIKIPLTPNSLPGGGKRVQTVGTSSRDVHVVPAGIAPQLREAIQDKQLMIQTLTQELA CCCEEEECCCCCCCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH QAEEEGNPAEIAQNQRLLAQARQDLAGYMRQAAVYGEESRRINR HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA