Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is yeaD [H]
Identifier: 120609739
GI number: 120609739
Start: 1151226
End: 1152089
Strand: Direct
Name: yeaD [H]
Synonym: Aave_1046
Alternate gene names: 120609739
Gene position: 1151226-1152089 (Clockwise)
Preceding gene: 120609737
Following gene: 120609740
Centisome position: 21.51
GC content: 71.76
Gene sequence:
>864_bases ATGACAGCCACCGCTCCGGCCGTGCCCGCGGCCTCCCTCCCGCCGTTTCCGGACCTGCCCGCCGTCCGGCTGCACGGCCC CCGGGCAGGCGCCGCCACCGTCGCTTTCCAAGGGGCGCAGGTGCTTTCCTGGACCACCGCGGACGGCGTCGAGCGCCTTT TTCTGAGCCCCCGGTCGGCCCATGACGGACACACGGCGATCCGCGGCGGGGTGCCGGTTTGCTGCCCCCAATTCAACCAG CGGGGGGCTTTGCCCAAGCATGGCTTTATGCGAAATTTGCCTTGGAAATTGGTATCCGAGTCGTCAAACGGTCACGTGAC GGGTGCCGTGATGGCGCTCGGGGACGACGAGGCCACCCGCGCGCTCTGGCCCCATGCCTTCCAGGCCCTGCTGGCCGTGG AGCTGTCCGAAGACGCCCTGCGCCTGTCGCTCACCCTGCGCAACACCGGTGATGCGCCCTGGTCCTTCACCGGCGCGCTG CATACCTATCTGCGGGTGGCGGACATCGCCCGGGCGCAGGTGGACGGGCTGCAGGGCTGCGCCCGCTGGGACGCCGTCGC CGACCGGCGCGGCATGCAGGAAGGCGCGGTGCGCTTCGACGGTGAATACGACAGCGTGTTCGAGGCCCCGGGCGCGCCGC TGCGCGTGGACACGGGGCAGGGCGTGCTGGCCGCCACCCAGGGCGGCTGGGCCGAGAATGTCGTCTGGAATCCCGGCGCC CAGCGCTGCGCGGCGCTGCCGGACATGCCCGGGGACGGCTTCCGCCACATGCTGTGCGTGGAGGCTGCCTGCGTGCACCG GCCCGTCGAAGTGGCGCCGGGCGCCGAATGGACCGGCTGGCAGCGGTTCGAAGTGCTGCGCTGA
Upstream 100 bases:
>100_bases GGCGGGGGTGGCGCATTGTCGTTCAATACGTGTGCGTACCCGGGCCGCAACGCGCCCGCCTTGCGGCTGCGCAAAGGCCT TCACTCCTACAATCCGAAAT
Downstream 100 bases:
>100_bases CGGCTCCCTGGGTTCCGTTCCCCGTTCCTCTTTTCTTCCTTACTTTCCCTCTCTCTCTCGCAGGACCCGCCCATGCTGGC CAAACGCATCATTCCCTGTC
Product: aldose 1-epimerase
Products: NA
Alternate protein names: Putative D-hexose-6-phosphate mutarotase; Unknown protein from 2D-page spots T26/PR37 [H]
Number of amino acids: Translated: 287; Mature: 286
Protein sequence:
>287_residues MTATAPAVPAASLPPFPDLPAVRLHGPRAGAATVAFQGAQVLSWTTADGVERLFLSPRSAHDGHTAIRGGVPVCCPQFNQ RGALPKHGFMRNLPWKLVSESSNGHVTGAVMALGDDEATRALWPHAFQALLAVELSEDALRLSLTLRNTGDAPWSFTGAL HTYLRVADIARAQVDGLQGCARWDAVADRRGMQEGAVRFDGEYDSVFEAPGAPLRVDTGQGVLAATQGGWAENVVWNPGA QRCAALPDMPGDGFRHMLCVEAACVHRPVEVAPGAEWTGWQRFEVLR
Sequences:
>Translated_287_residues MTATAPAVPAASLPPFPDLPAVRLHGPRAGAATVAFQGAQVLSWTTADGVERLFLSPRSAHDGHTAIRGGVPVCCPQFNQ RGALPKHGFMRNLPWKLVSESSNGHVTGAVMALGDDEATRALWPHAFQALLAVELSEDALRLSLTLRNTGDAPWSFTGAL HTYLRVADIARAQVDGLQGCARWDAVADRRGMQEGAVRFDGEYDSVFEAPGAPLRVDTGQGVLAATQGGWAENVVWNPGA QRCAALPDMPGDGFRHMLCVEAACVHRPVEVAPGAEWTGWQRFEVLR >Mature_286_residues TATAPAVPAASLPPFPDLPAVRLHGPRAGAATVAFQGAQVLSWTTADGVERLFLSPRSAHDGHTAIRGGVPVCCPQFNQR GALPKHGFMRNLPWKLVSESSNGHVTGAVMALGDDEATRALWPHAFQALLAVELSEDALRLSLTLRNTGDAPWSFTGALH TYLRVADIARAQVDGLQGCARWDAVADRRGMQEGAVRFDGEYDSVFEAPGAPLRVDTGQGVLAATQGGWAENVVWNPGAQ RCAALPDMPGDGFRHMLCVEAACVHRPVEVAPGAEWTGWQRFEVLR
Specific function: Unknown
COG id: COG0676
COG function: function code G; Uncharacterized enzymes related to aldose 1-epimerase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Glucose-6-phosphate 1-epimerase family [H]
Homologues:
Organism=Escherichia coli, GI87081973, Length=262, Percent_Identity=35.1145038167939, Blast_Score=125, Evalue=3e-30, Organism=Saccharomyces cerevisiae, GI6323746, Length=259, Percent_Identity=29.7297297297297, Blast_Score=125, Evalue=6e-30, Organism=Drosophila melanogaster, GI19921284, Length=264, Percent_Identity=32.1969696969697, Blast_Score=138, Evalue=4e-33, Organism=Drosophila melanogaster, GI28574481, Length=177, Percent_Identity=29.3785310734463, Blast_Score=91, Evalue=9e-19,
Paralogues:
None
Copy number: 560 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008183 - InterPro: IPR011013 - InterPro: IPR014718 [H]
Pfam domain/function: PF01263 Aldose_epim [H]
EC number: =5.1.3.15 [H]
Molecular weight: Translated: 30657; Mature: 30526
Theoretical pI: Translated: 6.41; Mature: 6.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTATAPAVPAASLPPFPDLPAVRLHGPRAGAATVAFQGAQVLSWTTADGVERLFLSPRSA CCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEECCCEEEEEECHHHHHHHHCCCCCC HDGHTAIRGGVPVCCPQFNQRGALPKHGFMRNLPWKLVSESSNGHVTGAVMALGDDEATR CCCCCCHHCCCCEECCCCCCCCCCCCCCHHHCCCCEEEECCCCCEEEEEEEEECCCHHHH ALWPHAFQALLAVELSEDALRLSLTLRNTGDAPWSFTGALHTYLRVADIARAQVDGLQGC HHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHH ARWDAVADRRGMQEGAVRFDGEYDSVFEAPGAPLRVDTGQGVLAATQGGWAENVVWNPGA HHHHHHHHHCCCCCCCEEECCCCCHHHCCCCCCEEEECCCCEEEEECCCCCCCCEECCCH QRCAALPDMPGDGFRHMLCVEAACVHRPVEVAPGAEWTGWQRFEVLR HHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECC >Mature Secondary Structure TATAPAVPAASLPPFPDLPAVRLHGPRAGAATVAFQGAQVLSWTTADGVERLFLSPRSA CCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEECCCEEEEEECHHHHHHHHCCCCCC HDGHTAIRGGVPVCCPQFNQRGALPKHGFMRNLPWKLVSESSNGHVTGAVMALGDDEATR CCCCCCHHCCCCEECCCCCCCCCCCCCCHHHCCCCEEEECCCCCEEEEEEEEECCCHHHH ALWPHAFQALLAVELSEDALRLSLTLRNTGDAPWSFTGALHTYLRVADIARAQVDGLQGC HHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHH ARWDAVADRRGMQEGAVRFDGEYDSVFEAPGAPLRVDTGQGVLAATQGGWAENVVWNPGA HHHHHHHHHCCCCCCCEEECCCCCHHHCCCCCCEEEECCCCEEEEECCCCCCCCEECCCH QRCAALPDMPGDGFRHMLCVEAACVHRPVEVAPGAEWTGWQRFEVLR HHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503; 9298646; 10493123 [H]