Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

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The map label for this gene is yeaD [H]

Identifier: 120609739

GI number: 120609739

Start: 1151226

End: 1152089

Strand: Direct

Name: yeaD [H]

Synonym: Aave_1046

Alternate gene names: 120609739

Gene position: 1151226-1152089 (Clockwise)

Preceding gene: 120609737

Following gene: 120609740

Centisome position: 21.51

GC content: 71.76

Gene sequence:

>864_bases
ATGACAGCCACCGCTCCGGCCGTGCCCGCGGCCTCCCTCCCGCCGTTTCCGGACCTGCCCGCCGTCCGGCTGCACGGCCC
CCGGGCAGGCGCCGCCACCGTCGCTTTCCAAGGGGCGCAGGTGCTTTCCTGGACCACCGCGGACGGCGTCGAGCGCCTTT
TTCTGAGCCCCCGGTCGGCCCATGACGGACACACGGCGATCCGCGGCGGGGTGCCGGTTTGCTGCCCCCAATTCAACCAG
CGGGGGGCTTTGCCCAAGCATGGCTTTATGCGAAATTTGCCTTGGAAATTGGTATCCGAGTCGTCAAACGGTCACGTGAC
GGGTGCCGTGATGGCGCTCGGGGACGACGAGGCCACCCGCGCGCTCTGGCCCCATGCCTTCCAGGCCCTGCTGGCCGTGG
AGCTGTCCGAAGACGCCCTGCGCCTGTCGCTCACCCTGCGCAACACCGGTGATGCGCCCTGGTCCTTCACCGGCGCGCTG
CATACCTATCTGCGGGTGGCGGACATCGCCCGGGCGCAGGTGGACGGGCTGCAGGGCTGCGCCCGCTGGGACGCCGTCGC
CGACCGGCGCGGCATGCAGGAAGGCGCGGTGCGCTTCGACGGTGAATACGACAGCGTGTTCGAGGCCCCGGGCGCGCCGC
TGCGCGTGGACACGGGGCAGGGCGTGCTGGCCGCCACCCAGGGCGGCTGGGCCGAGAATGTCGTCTGGAATCCCGGCGCC
CAGCGCTGCGCGGCGCTGCCGGACATGCCCGGGGACGGCTTCCGCCACATGCTGTGCGTGGAGGCTGCCTGCGTGCACCG
GCCCGTCGAAGTGGCGCCGGGCGCCGAATGGACCGGCTGGCAGCGGTTCGAAGTGCTGCGCTGA

Upstream 100 bases:

>100_bases
GGCGGGGGTGGCGCATTGTCGTTCAATACGTGTGCGTACCCGGGCCGCAACGCGCCCGCCTTGCGGCTGCGCAAAGGCCT
TCACTCCTACAATCCGAAAT

Downstream 100 bases:

>100_bases
CGGCTCCCTGGGTTCCGTTCCCCGTTCCTCTTTTCTTCCTTACTTTCCCTCTCTCTCTCGCAGGACCCGCCCATGCTGGC
CAAACGCATCATTCCCTGTC

Product: aldose 1-epimerase

Products: NA

Alternate protein names: Putative D-hexose-6-phosphate mutarotase; Unknown protein from 2D-page spots T26/PR37 [H]

Number of amino acids: Translated: 287; Mature: 286

Protein sequence:

>287_residues
MTATAPAVPAASLPPFPDLPAVRLHGPRAGAATVAFQGAQVLSWTTADGVERLFLSPRSAHDGHTAIRGGVPVCCPQFNQ
RGALPKHGFMRNLPWKLVSESSNGHVTGAVMALGDDEATRALWPHAFQALLAVELSEDALRLSLTLRNTGDAPWSFTGAL
HTYLRVADIARAQVDGLQGCARWDAVADRRGMQEGAVRFDGEYDSVFEAPGAPLRVDTGQGVLAATQGGWAENVVWNPGA
QRCAALPDMPGDGFRHMLCVEAACVHRPVEVAPGAEWTGWQRFEVLR

Sequences:

>Translated_287_residues
MTATAPAVPAASLPPFPDLPAVRLHGPRAGAATVAFQGAQVLSWTTADGVERLFLSPRSAHDGHTAIRGGVPVCCPQFNQ
RGALPKHGFMRNLPWKLVSESSNGHVTGAVMALGDDEATRALWPHAFQALLAVELSEDALRLSLTLRNTGDAPWSFTGAL
HTYLRVADIARAQVDGLQGCARWDAVADRRGMQEGAVRFDGEYDSVFEAPGAPLRVDTGQGVLAATQGGWAENVVWNPGA
QRCAALPDMPGDGFRHMLCVEAACVHRPVEVAPGAEWTGWQRFEVLR
>Mature_286_residues
TATAPAVPAASLPPFPDLPAVRLHGPRAGAATVAFQGAQVLSWTTADGVERLFLSPRSAHDGHTAIRGGVPVCCPQFNQR
GALPKHGFMRNLPWKLVSESSNGHVTGAVMALGDDEATRALWPHAFQALLAVELSEDALRLSLTLRNTGDAPWSFTGALH
TYLRVADIARAQVDGLQGCARWDAVADRRGMQEGAVRFDGEYDSVFEAPGAPLRVDTGQGVLAATQGGWAENVVWNPGAQ
RCAALPDMPGDGFRHMLCVEAACVHRPVEVAPGAEWTGWQRFEVLR

Specific function: Unknown

COG id: COG0676

COG function: function code G; Uncharacterized enzymes related to aldose 1-epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Glucose-6-phosphate 1-epimerase family [H]

Homologues:

Organism=Escherichia coli, GI87081973, Length=262, Percent_Identity=35.1145038167939, Blast_Score=125, Evalue=3e-30,
Organism=Saccharomyces cerevisiae, GI6323746, Length=259, Percent_Identity=29.7297297297297, Blast_Score=125, Evalue=6e-30,
Organism=Drosophila melanogaster, GI19921284, Length=264, Percent_Identity=32.1969696969697, Blast_Score=138, Evalue=4e-33,
Organism=Drosophila melanogaster, GI28574481, Length=177, Percent_Identity=29.3785310734463, Blast_Score=91, Evalue=9e-19,

Paralogues:

None

Copy number: 560 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008183
- InterPro:   IPR011013
- InterPro:   IPR014718 [H]

Pfam domain/function: PF01263 Aldose_epim [H]

EC number: =5.1.3.15 [H]

Molecular weight: Translated: 30657; Mature: 30526

Theoretical pI: Translated: 6.41; Mature: 6.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTATAPAVPAASLPPFPDLPAVRLHGPRAGAATVAFQGAQVLSWTTADGVERLFLSPRSA
CCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEECCCEEEEEECHHHHHHHHCCCCCC
HDGHTAIRGGVPVCCPQFNQRGALPKHGFMRNLPWKLVSESSNGHVTGAVMALGDDEATR
CCCCCCHHCCCCEECCCCCCCCCCCCCCHHHCCCCEEEECCCCCEEEEEEEEECCCHHHH
ALWPHAFQALLAVELSEDALRLSLTLRNTGDAPWSFTGALHTYLRVADIARAQVDGLQGC
HHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHH
ARWDAVADRRGMQEGAVRFDGEYDSVFEAPGAPLRVDTGQGVLAATQGGWAENVVWNPGA
HHHHHHHHHCCCCCCCEEECCCCCHHHCCCCCCEEEECCCCEEEEECCCCCCCCEECCCH
QRCAALPDMPGDGFRHMLCVEAACVHRPVEVAPGAEWTGWQRFEVLR
HHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECC
>Mature Secondary Structure 
TATAPAVPAASLPPFPDLPAVRLHGPRAGAATVAFQGAQVLSWTTADGVERLFLSPRSA
CCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEECCCEEEEEECHHHHHHHHCCCCCC
HDGHTAIRGGVPVCCPQFNQRGALPKHGFMRNLPWKLVSESSNGHVTGAVMALGDDEATR
CCCCCCHHCCCCEECCCCCCCCCCCCCCHHHCCCCEEEECCCCCEEEEEEEEECCCHHHH
ALWPHAFQALLAVELSEDALRLSLTLRNTGDAPWSFTGALHTYLRVADIARAQVDGLQGC
HHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHH
ARWDAVADRRGMQEGAVRFDGEYDSVFEAPGAPLRVDTGQGVLAATQGGWAENVVWNPGA
HHHHHHHHHCCCCCCCEEECCCCCHHHCCCCCCEEEECCCCEEEEECCCCCCCCEECCCH
QRCAALPDMPGDGFRHMLCVEAACVHRPVEVAPGAEWTGWQRFEVLR
HHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503; 9298646; 10493123 [H]