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The map label for this gene is yadH [H]

Identifier: 120609714

GI number: 120609714

Start: 1120351

End: 1121106

Strand: Direct

Name: yadH [H]

Synonym: Aave_1020

Alternate gene names: 120609714

Gene position: 1120351-1121106 (Clockwise)

Preceding gene: 120609713

Following gene: 120609715

Centisome position: 20.93

GC content: 64.02

Gene sequence:

>756_bases
ATGACCGGCTGGCAGACCCTGTTCTACAAGGAAGTGCTGCGTTTCTGGAAGGTGAGCTTCCAGACCATCGCCGCCCCCGT
GCTCACGGCCGTGCTCTACCTGCTGATCTTCGGCCACGTGCTGGAAGACCATGTGAAGGTCTATGACCGCCTGAGCTATA
CCGCCTTCCTGGTGCCGGGCCTCGTGATGATGAGCGTGCTGCAGAACGCGTTCGCGAACAGTTCGTCGAGCCTCATCCAG
AGCAAGATCATGGGCAACCTGGTGTTCGTGCTGCTCACGCCGCTGTCGCACTGGTCCTGGTTCTTCGCCTACGTGGGCTC
TTCGGTGGTGCGCGGCCTGGCCGTGGGGCTGGGCGTGTTCATCGCCACGCTCGGCTTCGCGCGGCCGGAATTCGCCGCGC
CGCTGTGGATCGCCGCGTTCGCGCTCCTGGGGGCCGCGCTGCTGGCCACGCTGGGCCTGATCGCCGGGCTCTGGGCCGAC
AAGTTCGACCAGATGGCGGCGTTCCAGAACTTCATCATCGTGCCGATGACCTTCCTCTCGGGCGTGTTCTATTCCATCCA
GTCGCTGCCGCCTTTCTGGCAGACGGTGAGCCACCTGAATCCGTTCTTCTACATGATCGACGGGTTCCGCTACGGCTTCT
TCGGGCAGAGCGATGCTTCGCCCTGGCTGAGCCTGGCCATCGTGGGCAGCGCCTGGCTGGCGGTGAGCGCGCTGGCCGTG
CATCTGCTGCGCACCGGATACAAGATCAGGAACTGA

Upstream 100 bases:

>100_bases
TGTTCCTCGGCCTCATGGCCGAAGGGCGCTACCCCGATCCCGCGCGCGAGCCCGCTCCGGCGGACGAGCCCGCGGAAACG
CCCGAAGGCGGGGTGCGGCT

Downstream 100 bases:

>100_bases
TGACCATCCTCCCGGGCGTGTGCACGCGAAGCGCCGCACGTGCGGCCGGGTGCCCGTCCTCCCACATGAACCACTGACAT
GACCGCCGACCAACTCAAAG

Product: ABC-2 type transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 250

Protein sequence:

>251_residues
MTGWQTLFYKEVLRFWKVSFQTIAAPVLTAVLYLLIFGHVLEDHVKVYDRLSYTAFLVPGLVMMSVLQNAFANSSSSLIQ
SKIMGNLVFVLLTPLSHWSWFFAYVGSSVVRGLAVGLGVFIATLGFARPEFAAPLWIAAFALLGAALLATLGLIAGLWAD
KFDQMAAFQNFIIVPMTFLSGVFYSIQSLPPFWQTVSHLNPFFYMIDGFRYGFFGQSDASPWLSLAIVGSAWLAVSALAV
HLLRTGYKIRN

Sequences:

>Translated_251_residues
MTGWQTLFYKEVLRFWKVSFQTIAAPVLTAVLYLLIFGHVLEDHVKVYDRLSYTAFLVPGLVMMSVLQNAFANSSSSLIQ
SKIMGNLVFVLLTPLSHWSWFFAYVGSSVVRGLAVGLGVFIATLGFARPEFAAPLWIAAFALLGAALLATLGLIAGLWAD
KFDQMAAFQNFIIVPMTFLSGVFYSIQSLPPFWQTVSHLNPFFYMIDGFRYGFFGQSDASPWLSLAIVGSAWLAVSALAV
HLLRTGYKIRN
>Mature_250_residues
TGWQTLFYKEVLRFWKVSFQTIAAPVLTAVLYLLIFGHVLEDHVKVYDRLSYTAFLVPGLVMMSVLQNAFANSSSSLIQS
KIMGNLVFVLLTPLSHWSWFFAYVGSSVVRGLAVGLGVFIATLGFARPEFAAPLWIAAFALLGAALLATLGLIAGLWADK
FDQMAAFQNFIIVPMTFLSGVFYSIQSLPPFWQTVSHLNPFFYMIDGFRYGFFGQSDASPWLSLAIVGSAWLAVSALAVH
LLRTGYKIRN

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1786320, Length=215, Percent_Identity=40.9302325581395, Blast_Score=166, Evalue=9e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 27831; Mature: 27700

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHCCCCCC
>Mature Secondary Structure 
TGWQTLFYKEVLRFWKVSFQTIAAPVLTAVLYLLIFGHVLEDHVKVYDRLSYTAFLVPG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVMMSVLQNAFANSSSSLIQSKIMGNLVFVLLTPLSHWSWFFAYVGSSVVRGLAVGLGVF
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IATLGFARPEFAAPLWIAAFALLGAALLATLGLIAGLWADKFDQMAAFQNFIIVPMTFLS
HHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVFYSIQSLPPFWQTVSHLNPFFYMIDGFRYGFFGQSDASPWLSLAIVGSAWLAVSALAV
HHHHHHHCCCHHHHHHHHCCHHHHHHHCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
HLLRTGYKIRN
HHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]