Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is yrbA [C]
Identifier: 120609715
GI number: 120609715
Start: 1121185
End: 1121433
Strand: Direct
Name: yrbA [C]
Synonym: Aave_1021
Alternate gene names: 120609715
Gene position: 1121185-1121433 (Clockwise)
Preceding gene: 120609714
Following gene: 120609716
Centisome position: 20.95
GC content: 67.87
Gene sequence:
>249_bases ATGACCGCCGACCAACTCAAAGACCTGATCCGGGCGGGGCTGCCCTGCGAGCACCTCACGCTGGAGGGCGACGGCCGCCA TTGGTATGCGACCATCGTCTCCGCGGAGTTCGAGGGCAAGCGTGCGATCCAGCGCCACCAGCGGGTGTACGCGACGCTGG GCAGCCGCATGCACACCGACGAGGTGCATGCGCTCTCCATGAAGACCTTCACGCCCGCCGAATGGGCCGCGCAGCCGCGT GGCGAATGA
Upstream 100 bases:
>100_bases CGGATACAAGATCAGGAACTGATGACCATCCTCCCGGGCGTGTGCACGCGAAGCGCCGCACGTGCGGCCGGGTGCCCGTC CTCCCACATGAACCACTGAC
Downstream 100 bases:
>100_bases ACGCAGGGCCCCGTCCGCTGCACCATCCGCGCAACGGCCCCTTCCCGTCCTCCAGACCCCAGAACAACAAGCCATGGACC AACTCCAGATTCGCGGCGGC
Product: BolA family protein
Products: NA
Alternate protein names: BolA-Like Protein; BolA Family Transcriptional Regulator; BolA Protein; Luene-Tolerance Protein; Transcriptional Regulator Transcription Regulator Protein; Bola Family Protein; BolA/YrbA Family Protein; BolA-Like Cell Cycle Protein
Number of amino acids: Translated: 82; Mature: 81
Protein sequence:
>82_residues MTADQLKDLIRAGLPCEHLTLEGDGRHWYATIVSAEFEGKRAIQRHQRVYATLGSRMHTDEVHALSMKTFTPAEWAAQPR GE
Sequences:
>Translated_82_residues MTADQLKDLIRAGLPCEHLTLEGDGRHWYATIVSAEFEGKRAIQRHQRVYATLGSRMHTDEVHALSMKTFTPAEWAAQPR GE >Mature_81_residues TADQLKDLIRAGLPCEHLTLEGDGRHWYATIVSAEFEGKRAIQRHQRVYATLGSRMHTDEVHALSMKTFTPAEWAAQPRG E
Specific function: Unknown
COG id: COG5007
COG function: function code K; Predicted transcriptional regulator, BolA superfamily
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9291; Mature: 9159
Theoretical pI: Translated: 7.07; Mature: 7.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTADQLKDLIRAGLPCEHLTLEGDGRHWYATIVSAEFEGKRAIQRHQRVYATLGSRMHTD CCHHHHHHHHHCCCCCCEEEEECCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCC EVHALSMKTFTPAEWAAQPRGE CCEEEECCCCCCHHCCCCCCCC >Mature Secondary Structure TADQLKDLIRAGLPCEHLTLEGDGRHWYATIVSAEFEGKRAIQRHQRVYATLGSRMHTD CHHHHHHHHHCCCCCCEEEEECCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCC EVHALSMKTFTPAEWAAQPRGE CCEEEECCCCCCHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA