Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
---|---|
Accession | NC_008752 |
Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is 120609650
Identifier: 120609650
GI number: 120609650
Start: 1042601
End: 1044064
Strand: Direct
Name: 120609650
Synonym: Aave_0956
Alternate gene names: NA
Gene position: 1042601-1044064 (Clockwise)
Preceding gene: 120609649
Following gene: 120609651
Centisome position: 19.48
GC content: 52.12
Gene sequence:
>1464_bases ATGGACTATTTGAGAATCATCATGCCAGATAGAGTCGACGTACAATATTTTTCCCAGGCCAAGCTTTGGGGGCAGCCGGT GCATGAACAAGTGATGGTTGCCAGGGATCTTGTTCGGCTTATTCCTGATGATGTGCGTACCATTCTGGATGCAGGATGTG GCAACGGGGCCGTGACCAACGATATTGCCGAATCCTGGAGCGTGGTGGGCTGCGACATCAGCGAGACGGCGCTGAAAAAC GTTGCTGCCCCGGCGGTGGTCGCTGACCTGTGCAAACTTCCCTTTCCTGATGACAGCTTCGATCTGGTCCTGGCCAGTGA TGTGATCGAGCATCTTCCCGATGAAATATATGAGCAGGCGCTCAGGGAAATCTCCAGGGTGGCCGCCAAGTATGTATTGA TTGCCGTGCCATACCGAGAGGTCCTGGAGGCGGCGTACGTTTCCTGCCCATCCTGCGATCAGCGATACCATGCGCATTTG CATCAGCGCGTTTATGAAGAAGCCAGCCTGCATGGCCTGATGGGAAACCAGTTCCAGATCGATAAGATGCTGCTTTCCGG GGAACATTGGAAATACAGTTCCACCTCTTTGCCCGATGCCTGTTACTCGGTGGCTGGCTTGGATTACCCTTTCGAGAATG CCATCTGCCCATATTGCGGTACCAGGAGGGGTGCCAAGACCGTCGGCAAGGGCGCCGAGAGCTTCAGAAGAAAGATCGAA GCATACCAGGCGATGTCCGTCGCATATGGGTTCGAGCCTGTGCCACCTCGGAGCGAGATCATCGCGCTCTACAAGAAGGG CGGTTCATTCTCGCAATCGATTGCTTTGGGTCCGGAAGATTTCATTGAAGATGAGCCGGAAATAATCGAAATCGATAGTG CTCCTAAATTGAAGGACCCGGTCAGTTATCCAGCGGTCGTATATGAGCTGGAATCTCAGGGCTCAGAGCGCCTGTTGTTC TTGAGAAAGTCCCCGGAAAAATTAAAAGTTTTGAGAGGACAGTTGTCCGGTGTGGATAGTTATTGTCCGGTCAATGAGGT TTATCGCCGGTCTGAGGCCTTGGAAGGTGGGGGTTTTGCCATCGCGGAAATTCCCTTCAACATGAGAGGCTTCTTGGTCC GGTTTGTTGGTGCGTCAGATGATCTGGTGGTCGGTTTGCAATACCGGAAATATACGTCGAGGGATGAGATACTGCACCTA TGCTTTCAATGTTTTCCATATGGTTCCGCTCAGGACAATGCACGCATCCAGCAATTGAATGCCATTGCGGAGAAGCTGGA ATCGACCCGCAGCGAACTGGAAGAGAAGCTGCGGATCAGGGATATGCATTATGAAGAGCTGCAGGAAAGATTTGAAGAAG TCAACGCGTTGGCAAATGGACTTGAAAGCGAGCGTGTCCGATTGAATGGGCTCTTGGTCGAAATGGAGAATTGTCGAACC AAGGGTGAAGAAGAGCAGCCGTAG
Upstream 100 bases:
>100_bases CTGGAAAGCCTCTTTGTGTTCAGGATAGAAAATATCGCCTGAAGATTTTGAGCCCTGAAAATATCAGGATGGAACGCGGT GTGGTTGTTCATCCCGTGGA
Downstream 100 bases:
>100_bases ATTCGAGTAGGCCATCGAGAGTCTGATTCAAGGCCGTGATCATCGAGGGAATATGAAAATAAAGTCAGTACTGGTTGTCT CGCATATGTATCCTCGAGAC
Product: type 11 methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 487; Mature: 487
Protein sequence:
>487_residues MDYLRIIMPDRVDVQYFSQAKLWGQPVHEQVMVARDLVRLIPDDVRTILDAGCGNGAVTNDIAESWSVVGCDISETALKN VAAPAVVADLCKLPFPDDSFDLVLASDVIEHLPDEIYEQALREISRVAAKYVLIAVPYREVLEAAYVSCPSCDQRYHAHL HQRVYEEASLHGLMGNQFQIDKMLLSGEHWKYSSTSLPDACYSVAGLDYPFENAICPYCGTRRGAKTVGKGAESFRRKIE AYQAMSVAYGFEPVPPRSEIIALYKKGGSFSQSIALGPEDFIEDEPEIIEIDSAPKLKDPVSYPAVVYELESQGSERLLF LRKSPEKLKVLRGQLSGVDSYCPVNEVYRRSEALEGGGFAIAEIPFNMRGFLVRFVGASDDLVVGLQYRKYTSRDEILHL CFQCFPYGSAQDNARIQQLNAIAEKLESTRSELEEKLRIRDMHYEELQERFEEVNALANGLESERVRLNGLLVEMENCRT KGEEEQP
Sequences:
>Translated_487_residues MDYLRIIMPDRVDVQYFSQAKLWGQPVHEQVMVARDLVRLIPDDVRTILDAGCGNGAVTNDIAESWSVVGCDISETALKN VAAPAVVADLCKLPFPDDSFDLVLASDVIEHLPDEIYEQALREISRVAAKYVLIAVPYREVLEAAYVSCPSCDQRYHAHL HQRVYEEASLHGLMGNQFQIDKMLLSGEHWKYSSTSLPDACYSVAGLDYPFENAICPYCGTRRGAKTVGKGAESFRRKIE AYQAMSVAYGFEPVPPRSEIIALYKKGGSFSQSIALGPEDFIEDEPEIIEIDSAPKLKDPVSYPAVVYELESQGSERLLF LRKSPEKLKVLRGQLSGVDSYCPVNEVYRRSEALEGGGFAIAEIPFNMRGFLVRFVGASDDLVVGLQYRKYTSRDEILHL CFQCFPYGSAQDNARIQQLNAIAEKLESTRSELEEKLRIRDMHYEELQERFEEVNALANGLESERVRLNGLLVEMENCRT KGEEEQP >Mature_487_residues MDYLRIIMPDRVDVQYFSQAKLWGQPVHEQVMVARDLVRLIPDDVRTILDAGCGNGAVTNDIAESWSVVGCDISETALKN VAAPAVVADLCKLPFPDDSFDLVLASDVIEHLPDEIYEQALREISRVAAKYVLIAVPYREVLEAAYVSCPSCDQRYHAHL HQRVYEEASLHGLMGNQFQIDKMLLSGEHWKYSSTSLPDACYSVAGLDYPFENAICPYCGTRRGAKTVGKGAESFRRKIE AYQAMSVAYGFEPVPPRSEIIALYKKGGSFSQSIALGPEDFIEDEPEIIEIDSAPKLKDPVSYPAVVYELESQGSERLLF LRKSPEKLKVLRGQLSGVDSYCPVNEVYRRSEALEGGGFAIAEIPFNMRGFLVRFVGASDDLVVGLQYRKYTSRDEILHL CFQCFPYGSAQDNARIQQLNAIAEKLESTRSELEEKLRIRDMHYEELQERFEEVNALANGLESERVRLNGLLVEMENCRT KGEEEQP
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54766; Mature: 54766
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDYLRIIMPDRVDVQYFSQAKLWGQPVHEQVMVARDLVRLIPDDVRTILDAGCGNGAVTN CCCEEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCHH DIAESWSVVGCDISETALKNVAAPAVVADLCKLPFPDDSFDLVLASDVIEHLPDEIYEQA HHHHCCCEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHH LREISRVAAKYVLIAVPYREVLEAAYVSCPSCDQRYHAHLHQRVYEEASLHGLMGNQFQI HHHHHHHHHHHHEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEH DKMLLSGEHWKYSSTSLPDACYSVAGLDYPFENAICPYCGTRRGAKTVGKGAESFRRKIE HHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHH AYQAMSVAYGFEPVPPRSEIIALYKKGGSFSQSIALGPEDFIEDEPEIIEIDSAPKLKDP HHHHHHHHCCCCCCCCHHHEEEEHHCCCCCCCEECCCCHHHHCCCCCEEEECCCCCCCCC VSYPAVVYELESQGSERLLFLRKSPEKLKVLRGQLSGVDSYCPVNEVYRRSEALEGGGFA CCCCCEEEEECCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCEE IAEIPFNMRGFLVRFVGASDDLVVGLQYRKYTSRDEILHLCFQCFPYGSAQDNARIQQLN EEECCCCHHHHHHEEECCCCCEEEEEHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHH AIAEKLESTRSELEEKLRIRDMHYEELQERFEEVNALANGLESERVRLNGLLVEMENCRT HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHCCEEEHHEEEEEHHHCC KGEEEQP CCCCCCC >Mature Secondary Structure MDYLRIIMPDRVDVQYFSQAKLWGQPVHEQVMVARDLVRLIPDDVRTILDAGCGNGAVTN CCCEEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCHH DIAESWSVVGCDISETALKNVAAPAVVADLCKLPFPDDSFDLVLASDVIEHLPDEIYEQA HHHHCCCEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHH LREISRVAAKYVLIAVPYREVLEAAYVSCPSCDQRYHAHLHQRVYEEASLHGLMGNQFQI HHHHHHHHHHHHEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEH DKMLLSGEHWKYSSTSLPDACYSVAGLDYPFENAICPYCGTRRGAKTVGKGAESFRRKIE HHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHH AYQAMSVAYGFEPVPPRSEIIALYKKGGSFSQSIALGPEDFIEDEPEIIEIDSAPKLKDP HHHHHHHHCCCCCCCCHHHEEEEHHCCCCCCCEECCCCHHHHCCCCCEEEECCCCCCCCC VSYPAVVYELESQGSERLLFLRKSPEKLKVLRGQLSGVDSYCPVNEVYRRSEALEGGGFA CCCCCEEEEECCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCEE IAEIPFNMRGFLVRFVGASDDLVVGLQYRKYTSRDEILHLCFQCFPYGSAQDNARIQQLN EEECCCCHHHHHHEEECCCCCEEEEEHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHH AIAEKLESTRSELEEKLRIRDMHYEELQERFEEVNALANGLESERVRLNGLLVEMENCRT HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHCCEEEHHEEEEEHHHCC KGEEEQP CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA