Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is glk [H]
Identifier: 120609635
GI number: 120609635
Start: 1024915
End: 1025760
Strand: Reverse
Name: glk [H]
Synonym: Aave_0941
Alternate gene names: 120609635
Gene position: 1025760-1024915 (Counterclockwise)
Preceding gene: 120609636
Following gene: 120609634
Centisome position: 19.16
GC content: 69.86
Gene sequence:
>846_bases ATGCTCGAGCGCATCACCGCCTCACTGCCTTCGCTGGCCCCCGCCGAACAGCGGGTGGGCCAGCTGGTGCTGCAGGACGC GCGTGCGTTCGCGCGGCTGCCGGTGCGGGAGCTGGCGGCGCGGGCGGGGGTGAGCAAGCCCACGGTGGTGCGCTTTTGCC GCAGCATGGGGTACGACGGGCTGGCCGACTTCAAGCTCAAGCTCGCGGGCAGCGTGAGCGAGGGCGTGCCGTTCATCCAC CGCAGCGTGGACGCCGACGACAAGACCGGCGACGTGCTCGTGAAGGTCGTGGACAACGCCGTCGCCGCATTCCTGCAGTA CCGCAACGCGGCGAGCACCAAGGCCATCGAGCAGGCCGCGCAGGCGATCGCAGCCACCTGGCAGACAGGCCGGCGCATCG AGTTCTACGGCGCCGGCAACTCGGGCATCGTGGCGCAGGACGCGCAGCACAAGTTCTTCCGGCTGGGCGTGACCAGCCTC GCGACCAGCGATGGACACATGCAGGTCATGAGCGCGACCCTGCTGGGACCGGGCGACTGCGTGGTGATCGTCTCCAACTC CGGGCGCACGCGCGACCTCATGGACGCGACCGACATCGCCCGCAGGAACGGCGCCACCACCATCGCCATCACCGCCAGCG GCTCGCCCCTGGCCAGCGCCTGCCACATCCATCTGGCGGCGGACCATCCAGAGGGATACGACCGCTACAGCCCGATGGTC TCCCGCCTGCTGCACCTGCTCATCATCGACGTGCTCGCCACCTGCGTGGCGCTGCGCATCGGCGAGCCGCTGCAGCCCCG CCTGCAGCAGATGAAGGACAACCTGCGGGCCAAGCGCTACACCTGA
Upstream 100 bases:
>100_bases TGCTCCGCGGCCATTCGACGGGTGAGGCCGCGCCAGTTTCACGGGCTATGGGCAGTGGCACTCATCCAGTGCCCTCCAGC CTTCGCACGGGACTGCTGAC
Downstream 100 bases:
>100_bases ACGAAGCGCCACCGCGCGGTCCCTCGACCACGCGGCTCCATCCCGCCCGCCACGGGCAATCCACCTGCCGATCGCAGGCA ATGAACCGGCCCCATGTGGA
Product: RpiR family transcriptional regulator
Products: NA
Alternate protein names: Glucokinase; Glucose kinase; Putative HTH-type transcriptional regulator [H]
Number of amino acids: Translated: 281; Mature: 281
Protein sequence:
>281_residues MLERITASLPSLAPAEQRVGQLVLQDARAFARLPVRELAARAGVSKPTVVRFCRSMGYDGLADFKLKLAGSVSEGVPFIH RSVDADDKTGDVLVKVVDNAVAAFLQYRNAASTKAIEQAAQAIAATWQTGRRIEFYGAGNSGIVAQDAQHKFFRLGVTSL ATSDGHMQVMSATLLGPGDCVVIVSNSGRTRDLMDATDIARRNGATTIAITASGSPLASACHIHLAADHPEGYDRYSPMV SRLLHLLIIDVLATCVALRIGEPLQPRLQQMKDNLRAKRYT
Sequences:
>Translated_281_residues MLERITASLPSLAPAEQRVGQLVLQDARAFARLPVRELAARAGVSKPTVVRFCRSMGYDGLADFKLKLAGSVSEGVPFIH RSVDADDKTGDVLVKVVDNAVAAFLQYRNAASTKAIEQAAQAIAATWQTGRRIEFYGAGNSGIVAQDAQHKFFRLGVTSL ATSDGHMQVMSATLLGPGDCVVIVSNSGRTRDLMDATDIARRNGATTIAITASGSPLASACHIHLAADHPEGYDRYSPMV SRLLHLLIIDVLATCVALRIGEPLQPRLQQMKDNLRAKRYT >Mature_281_residues MLERITASLPSLAPAEQRVGQLVLQDARAFARLPVRELAARAGVSKPTVVRFCRSMGYDGLADFKLKLAGSVSEGVPFIH RSVDADDKTGDVLVKVVDNAVAAFLQYRNAASTKAIEQAAQAIAATWQTGRRIEFYGAGNSGIVAQDAQHKFFRLGVTSL ATSDGHMQVMSATLLGPGDCVVIVSNSGRTRDLMDATDIARRNGATTIAITASGSPLASACHIHLAADHPEGYDRYSPMV SRLLHLLIIDVLATCVALRIGEPLQPRLQQMKDNLRAKRYT
Specific function: Represses The Expression Of The Hex Regulon (Zwf, Eda, Glp And Gap) (By Similarity). [C]
COG id: COG1737
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 SIS domain [H]
Homologues:
Organism=Escherichia coli, GI1788159, Length=280, Percent_Identity=37.8571428571429, Blast_Score=199, Evalue=2e-52, Organism=Escherichia coli, GI87082369, Length=248, Percent_Identity=28.6290322580645, Blast_Score=112, Evalue=3e-26, Organism=Escherichia coli, GI87082130, Length=215, Percent_Identity=29.3023255813954, Blast_Score=85, Evalue=5e-18, Organism=Escherichia coli, GI1788767, Length=266, Percent_Identity=24.812030075188, Blast_Score=83, Evalue=2e-17,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003836 - InterPro: IPR000843 - InterPro: IPR000281 - InterPro: IPR001347 - InterPro: IPR011991 [H]
Pfam domain/function: PF02685 Glucokinase; PF01418 HTH_6; PF01380 SIS [H]
EC number: =2.7.1.2 [H]
Molecular weight: Translated: 30210; Mature: 30210
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: PS00356 HTH_LACI_1 ; PS51071 HTH_RPIR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLERITASLPSLAPAEQRVGQLVLQDARAFARLPVRELAARAGVSKPTVVRFCRSMGYDG CCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHCCCCC LADFKLKLAGSVSEGVPFIHRSVDADDKTGDVLVKVVDNAVAAFLQYRNAASTKAIEQAA CCCEEEEECCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH QAIAATWQTGRRIEFYGAGNSGIVAQDAQHKFFRLGVTSLATSDGHMQVMSATLLGPGDC HHHHHHHCCCCEEEEEECCCCCEEECHHHHHHHHHHHHHHHCCCCCCEEHHHHEECCCCE VVIVSNSGRTRDLMDATDIARRNGATTIAITASGSPLASACHIHLAADHPEGYDRYSPMV EEEECCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEEEECCCCCCHHHHHHHH SRLLHLLIIDVLATCVALRIGEPLQPRLQQMKDNLRAKRYT HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure MLERITASLPSLAPAEQRVGQLVLQDARAFARLPVRELAARAGVSKPTVVRFCRSMGYDG CCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHCCCCC LADFKLKLAGSVSEGVPFIHRSVDADDKTGDVLVKVVDNAVAAFLQYRNAASTKAIEQAA CCCEEEEECCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH QAIAATWQTGRRIEFYGAGNSGIVAQDAQHKFFRLGVTSLATSDGHMQVMSATLLGPGDC HHHHHHHCCCCEEEEEECCCCCEEECHHHHHHHHHHHHHHHCCCCCCEEHHHHEECCCCE VVIVSNSGRTRDLMDATDIARRNGATTIAITASGSPLASACHIHLAADHPEGYDRYSPMV EEEECCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEEEECCCCCCHHHHHHHH SRLLHLLIIDVLATCVALRIGEPLQPRLQQMKDNLRAKRYT HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA