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The map label for this gene is tse [H]

Identifier: 120609634

GI number: 120609634

Start: 1022791

End: 1024431

Strand: Reverse

Name: tse [H]

Synonym: Aave_0940

Alternate gene names: 120609634

Gene position: 1024431-1022791 (Counterclockwise)

Preceding gene: 120609635

Following gene: 120609625

Centisome position: 19.14

GC content: 66.97

Gene sequence:

>1641_bases
ATGCAAATCCTTCGACAAGTCAAGATCGGCACGCGGCTGGCATTGGGGTTCGGCGCCCTGCTGGCCTTGCTGCTCGGCCT
GGGGCTGTTCGGCATCATTCAGATCCGGAACATCAACTACCACGCCAATGAGCTCGGAACCGACTGGTTGCCCAGTGTCC
GAGCCATCGGTGAAGTGCGGGCCGTGCTGAACAGCGGCCGGCGGGCCAGCTTGCGGCGTCTGCTGGAAGCCAGCGCCGAA
GGCCGCCAGCGGCAACTGGCAAGCCAGAAGACGCTGATGGACGAGCAATTGCCACGCAACATCGCCATCTATGAAAAGAT
GATTTCCTCGCCCGAAGAGCAGAGGCTCTTCAACGTCTTCCGCGCGCAGTTGGACAACTACCGCATCCTCGAACGGCGCC
TCGTGTCACTGCTGGACGAAGGCGGTGCGTCGACCGCCGCGGCCAGCACTCTCGCGACCGGCGATTCCGCCAAGCTGTTT
GCCGACCTCACCGAGACGCTGACCCAATTGGTGAAGCTGAACGAGGAAGGCGGCGCCGCCGCGGCCGCCGCCGCGAGCGC
CGGATACGACCGCGCCATCCTGGTCTTCAGCGTCCTCATCGCCTTCTCGCTCTTCTGCGGCCTGGCATTGGCCGTCGTGG
TGACGCGCTCCATCACCCAGCCACTGGCCACCGGGGTTTCCGTCGCTTCGGCCGTGGCCCAGGGCGATCTCACGTCCTCG
TTCCACATCCAGGGCAGGGACGAACCCGCGGCACTGCTGCAGGCCCTGCAGCACATGAACGGCCAGCTCGTGTCCATGGT
CGGGCAGGTGCGCGACAGCAGCGAGAGCATCGCCACCGGCGCGGCCGAGATCGCGATGGGCAATGCGGACCTGAGCCAGC
GCACCGAACAGCAGGCCAGCAGCCTGGAGGAAACCGCGGCATCGATGGAGGAATTGAGCAGCACCGTGAAGACCAATTCC
GACACGGCACGGGAAGCCAACCAACTCGCTGCCCTCGCCACCCAGGCGGCGGAACAGGGCGGCACCATCGTCGGGAACGT
GGTGGCCACCATGAAGACCATCGCGGCCTCGTCGAACAAGATCGCGGACATCACGAGCGTCATCGATTCCATCGCCTTCC
AGACCAACATCCTGGCGCTGAACGCGGCCGTCGAAGCGGCGCGCGCCGGCGAGCAGGGCCGGGGCTTCGCCGTGGTGGCG
AGCGAAGTGCGCACGCTGGCGCAGCGCTCCTCCCAGGCCGCCAAGGAAATCAAGGACCTCATCACGGACAGCGTGGCGAA
GGTGGACAACGGCAGCCAGCTGGTCGGCGAAGCGGGCCGCAGCATGGACGACATCGTGGCCCAGGTGCGCCAGGTCGGCA
CCCTGATCAGCGAGATCGCCAACGCCTCGGCAGAGCAGAGCAGCGGCATCAGCCAGGTGGGAGAAGCCGTGAATCACCTG
GACCAGGTGACGCAGCAGAACGCCGCGCTGGTGGAGCAAAGCGCCGCCGCGGCCGCCAGCCTGCGGGCGCAGTCGGAGCA
GCTCAACACGCTGGTGGCGGTTTTCAAGCTGCAGGCCCAGGCCTCGCCTGCGGCAACGGGATGGGGTTCCCACAGCCCGG
CCAGGGCGCGTGCGCACCTGCCGGCACTGGCGGCCGCCTGA

Upstream 100 bases:

>100_bases
TTTTTCATGGAGCGGAAAGCATTAAAAACGATACAAACACGCGAGACTGCGCTAAGATTGATAAATATGATCTAGCAACA
TGTACCAAGGGAGTTCATCC

Downstream 100 bases:

>100_bases
CCGGCCCCGGCAGTTCGCTATTCAGGCCACGGCAGCGGATGCCAGGGGAATCCGCCCCTCCTCGATCCCATGGCACGCCA
CGCGCGTGCCGCCGTCATCG

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 546; Mature: 546

Protein sequence:

>546_residues
MQILRQVKIGTRLALGFGALLALLLGLGLFGIIQIRNINYHANELGTDWLPSVRAIGEVRAVLNSGRRASLRRLLEASAE
GRQRQLASQKTLMDEQLPRNIAIYEKMISSPEEQRLFNVFRAQLDNYRILERRLVSLLDEGGASTAAASTLATGDSAKLF
ADLTETLTQLVKLNEEGGAAAAAAASAGYDRAILVFSVLIAFSLFCGLALAVVVTRSITQPLATGVSVASAVAQGDLTSS
FHIQGRDEPAALLQALQHMNGQLVSMVGQVRDSSESIATGAAEIAMGNADLSQRTEQQASSLEETAASMEELSSTVKTNS
DTAREANQLAALATQAAEQGGTIVGNVVATMKTIAASSNKIADITSVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVA
SEVRTLAQRSSQAAKEIKDLITDSVAKVDNGSQLVGEAGRSMDDIVAQVRQVGTLISEIANASAEQSSGISQVGEAVNHL
DQVTQQNAALVEQSAAAAASLRAQSEQLNTLVAVFKLQAQASPAATGWGSHSPARARAHLPALAAA

Sequences:

>Translated_546_residues
MQILRQVKIGTRLALGFGALLALLLGLGLFGIIQIRNINYHANELGTDWLPSVRAIGEVRAVLNSGRRASLRRLLEASAE
GRQRQLASQKTLMDEQLPRNIAIYEKMISSPEEQRLFNVFRAQLDNYRILERRLVSLLDEGGASTAAASTLATGDSAKLF
ADLTETLTQLVKLNEEGGAAAAAAASAGYDRAILVFSVLIAFSLFCGLALAVVVTRSITQPLATGVSVASAVAQGDLTSS
FHIQGRDEPAALLQALQHMNGQLVSMVGQVRDSSESIATGAAEIAMGNADLSQRTEQQASSLEETAASMEELSSTVKTNS
DTAREANQLAALATQAAEQGGTIVGNVVATMKTIAASSNKIADITSVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVA
SEVRTLAQRSSQAAKEIKDLITDSVAKVDNGSQLVGEAGRSMDDIVAQVRQVGTLISEIANASAEQSSGISQVGEAVNHL
DQVTQQNAALVEQSAAAAASLRAQSEQLNTLVAVFKLQAQASPAATGWGSHSPARARAHLPALAAA
>Mature_546_residues
MQILRQVKIGTRLALGFGALLALLLGLGLFGIIQIRNINYHANELGTDWLPSVRAIGEVRAVLNSGRRASLRRLLEASAE
GRQRQLASQKTLMDEQLPRNIAIYEKMISSPEEQRLFNVFRAQLDNYRILERRLVSLLDEGGASTAAASTLATGDSAKLF
ADLTETLTQLVKLNEEGGAAAAAAASAGYDRAILVFSVLIAFSLFCGLALAVVVTRSITQPLATGVSVASAVAQGDLTSS
FHIQGRDEPAALLQALQHMNGQLVSMVGQVRDSSESIATGAAEIAMGNADLSQRTEQQASSLEETAASMEELSSTVKTNS
DTAREANQLAALATQAAEQGGTIVGNVVATMKTIAASSNKIADITSVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVA
SEVRTLAQRSSQAAKEIKDLITDSVAKVDNGSQLVGEAGRSMDDIVAQVRQVGTLISEIANASAEQSSGISQVGEAVNHL
DQVTQQNAALVEQSAAAAASLRAQSEQLNTLVAVFKLQAQASPAATGWGSHSPARARAHLPALAAA

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=566, Percent_Identity=42.0494699646643, Blast_Score=316, Evalue=3e-87,
Organism=Escherichia coli, GI1788195, Length=328, Percent_Identity=55.7926829268293, Blast_Score=300, Evalue=1e-82,
Organism=Escherichia coli, GI1788194, Length=340, Percent_Identity=52.0588235294118, Blast_Score=293, Evalue=2e-80,
Organism=Escherichia coli, GI1787690, Length=332, Percent_Identity=52.1084337349398, Blast_Score=291, Evalue=6e-80,
Organism=Escherichia coli, GI1789453, Length=328, Percent_Identity=41.1585365853659, Blast_Score=224, Evalue=9e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 57044; Mature: 57044

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQILRQVKIGTRLALGFGALLALLLGLGLFGIIQIRNINYHANELGTDWLPSVRAIGEVR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHCCCCHHHHHHHHHHHH
AVLNSGRRASLRRLLEASAEGRQRQLASQKTLMDEQLPRNIAIYEKMISSPEEQRLFNVF
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHH
RAQLDNYRILERRLVSLLDEGGASTAAASTLATGDSAKLFADLTETLTQLVKLNEEGGAA
HHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHH
AAAAASAGYDRAILVFSVLIAFSLFCGLALAVVVTRSITQPLATGVSVASAVAQGDLTSS
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
FHIQGRDEPAALLQALQHMNGQLVSMVGQVRDSSESIATGAAEIAMGNADLSQRTEQQAS
EEECCCCCHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHCHHHHHCCCCCHHHHHHHHHH
SLEETAASMEELSSTVKTNSDTAREANQLAALATQAAEQGGTIVGNVVATMKTIAASSNK
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCC
IADITSVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSSQAAKEIKDL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ITDSVAKVDNGSQLVGEAGRSMDDIVAQVRQVGTLISEIANASAEQSSGISQVGEAVNHL
HHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHH
DQVTQQNAALVEQSAAAAASLRAQSEQLNTLVAVFKLQAQASPAATGWGSHSPARARAHL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHC
PALAAA
CHHHCC
>Mature Secondary Structure
MQILRQVKIGTRLALGFGALLALLLGLGLFGIIQIRNINYHANELGTDWLPSVRAIGEVR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHCCCCHHHHHHHHHHHH
AVLNSGRRASLRRLLEASAEGRQRQLASQKTLMDEQLPRNIAIYEKMISSPEEQRLFNVF
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHH
RAQLDNYRILERRLVSLLDEGGASTAAASTLATGDSAKLFADLTETLTQLVKLNEEGGAA
HHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHH
AAAAASAGYDRAILVFSVLIAFSLFCGLALAVVVTRSITQPLATGVSVASAVAQGDLTSS
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
FHIQGRDEPAALLQALQHMNGQLVSMVGQVRDSSESIATGAAEIAMGNADLSQRTEQQAS
EEECCCCCHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHCHHHHHCCCCCHHHHHHHHHH
SLEETAASMEELSSTVKTNSDTAREANQLAALATQAAEQGGTIVGNVVATMKTIAASSNK
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCC
IADITSVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSSQAAKEIKDL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ITDSVAKVDNGSQLVGEAGRSMDDIVAQVRQVGTLISEIANASAEQSSGISQVGEAVNHL
HHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHH
DQVTQQNAALVEQSAAAAASLRAQSEQLNTLVAVFKLQAQASPAATGWGSHSPARARAHL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHC
PALAAA
CHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2496104 [H]