Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
---|---|
Accession | NC_008752 |
Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is 120609618
Identifier: 120609618
GI number: 120609618
Start: 1006914
End: 1007369
Strand: Reverse
Name: 120609618
Synonym: Aave_0924
Alternate gene names: NA
Gene position: 1007369-1006914 (Counterclockwise)
Preceding gene: 120609619
Following gene: 120609617
Centisome position: 18.82
GC content: 73.68
Gene sequence:
>456_bases ATGCCGACATCGGCAGCTGGCAGTAAGCGCTGGCGCCGCGGCGCCCGGGGCTTCACGCTGCTGGAACTGCTGGTGGTGAT CTCGCTGATCGCCATCGCCACGGCGGGCGTGGGCTTCGCACTGCGGGACGACGGCCAGACGGCCCTGCAGCGCGAAGGCG AGCGCCTCGCCGCGCTGCTGGAGGCGGGCCGGGCCCAGTCCCGTGCCTCCGGCGCGCCGGTACGCTGGCGTGCCGTTGGC GGAAACTTCCGGTTCGAGGGACTGCCCGGCAACCCGGCCCCGGGCGCCTGGCTCGATCCCTCGACCTACGTGGTGGGCCC CGCGCTGCTGCAACTGGGCCCCGAGCCGCTGATTGCACCGCAGCAGGTGGTGCTCGCGAGCCAGTCCCATCCCGGGCGCT CGGTGCGCGTGGCGACCGACGGCCTGCGTCCCTTCACCGCGGAGACGGTGCAATGA
Upstream 100 bases:
>100_bases CCCTGGGGCCGGCCCTACCAGTACCTGAATCCCGGCATCAAGGGCGAAGTGGACGTGATGTCCTTCGGCGCCGACGGGCA GTCGGGCGGCGAGGGCAAGA
Downstream 100 bases:
>100_bases CCCCGCGCGCGGCCACCGCTCGCCAGTGCGCTGGCCGGGCATCGGCCACGGGTTTCACGCTGGTCGAAGTGCTGGTGGCC CTGGCCATCGTGGCGATCGC
Product: general secretion pathway protein H
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 151; Mature: 150
Protein sequence:
>151_residues MPTSAAGSKRWRRGARGFTLLELLVVISLIAIATAGVGFALRDDGQTALQREGERLAALLEAGRAQSRASGAPVRWRAVG GNFRFEGLPGNPAPGAWLDPSTYVVGPALLQLGPEPLIAPQQVVLASQSHPGRSVRVATDGLRPFTAETVQ
Sequences:
>Translated_151_residues MPTSAAGSKRWRRGARGFTLLELLVVISLIAIATAGVGFALRDDGQTALQREGERLAALLEAGRAQSRASGAPVRWRAVG GNFRFEGLPGNPAPGAWLDPSTYVVGPALLQLGPEPLIAPQQVVLASQSHPGRSVRVATDGLRPFTAETVQ >Mature_150_residues PTSAAGSKRWRRGARGFTLLELLVVISLIAIATAGVGFALRDDGQTALQREGERLAALLEAGRAQSRASGAPVRWRAVGG NFRFEGLPGNPAPGAWLDPSTYVVGPALLQLGPEPLIAPQQVVLASQSHPGRSVRVATDGLRPFTAETVQ
Specific function: Unknown
COG id: COG2165
COG function: function code NU; Type II secretory pathway, pseudopilin PulG
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15860; Mature: 15729
Theoretical pI: Translated: 11.72; Mature: 11.72
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTSAAGSKRWRRGARGFTLLELLVVISLIAIATAGVGFALRDDGQTALQREGERLAALL CCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHH EAGRAQSRASGAPVRWRAVGGNFRFEGLPGNPAPGAWLDPSTYVVGPALLQLGPEPLIAP HHCCCCCCCCCCCEEEEEECCCEEECCCCCCCCCCCCCCCCCEEHHHHHHHCCCCCCCCC QQVVLASQSHPGRSVRVATDGLRPFTAETVQ CHHEEECCCCCCCEEEEECCCCCCCCCCCCC >Mature Secondary Structure PTSAAGSKRWRRGARGFTLLELLVVISLIAIATAGVGFALRDDGQTALQREGERLAALL CCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHH EAGRAQSRASGAPVRWRAVGGNFRFEGLPGNPAPGAWLDPSTYVVGPALLQLGPEPLIAP HHCCCCCCCCCCCEEEEEECCCEEECCCCCCCCCCCCCCCCCEEHHHHHHHCCCCCCCCC QQVVLASQSHPGRSVRVATDGLRPFTAETVQ CHHEEECCCCCCCEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA