Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is xcpX [H]
Identifier: 120609615
GI number: 120609615
Start: 1004589
End: 1005662
Strand: Reverse
Name: xcpX [H]
Synonym: Aave_0921
Alternate gene names: 120609615
Gene position: 1005662-1004589 (Counterclockwise)
Preceding gene: 120609616
Following gene: 120609614
Centisome position: 18.79
GC content: 72.63
Gene sequence:
>1074_bases GTGACGCGGCGCGGCGGCGGCAGGACGGGCGCCGTGCGCCAGCGCGGGGCGGCGCTCCTCGCGGCGATGCTCACCGTGGC GCTGGTGGCCACTTTCGCGGCTGCGGCGATGTGGCAGCAATGGCGCGCCGTCGAGGTGGAAGCCGCCGAACGGGCACGCG TGCAGTCGGCATGGCTGCTGGTCGGCGCGCTCGACTGGTCGCGGCTGATCCTGCGCGAAGACCTGTTCGCGCGCGGCGGT GACGGTACGGACCACCTCGCGGAACCCTGGGCCGTTCCGCTGGAAGAGGCGCGGCTGTCCACCTTCCTCGCGGCCGGGCC CGAAGGCGCGACGGCCGAGCCGGATGCCAGCACGGACACCGCCAATGCCTTCCTGTCGGGCCAGATCACCGACCTGCAGT CGCGGCTCAATGTCTTCAACCTGGTCGAGGGCACCGCCTTGTCCGCGCCCGCCCTGCGCCAGTTCGGCCGCCTGTTCGAT GCGCTGGGGCTGCCGCAGCAGGAGTTGCAGCAGCTCGCGGAAGGCCTGCGCAAGGCGATGGCGCAGAGCCATGCCGCGGG AACCGGCAACCCCGGCACCGGCACCGGAACTGGCACGGGCGCCGCGGCAGCGCCCGCCGCCGGACCGGCCGACCTCGCAT CCGTTCCGCTCATGCCCCGCAGCTTCACGCAGCTCACGTGGCTGGGGCTGTCGGCGTCCACGGTCGCCGCGCTGGAACCG TATGCGACCCTGCTGCCGCGGCGCACGCCGGTCAATCTCAATACCGCGAGCGCGCAGGTGCTGCAGGCCAGCATCGACGG GCTGGACATGGCGGGCGCGCAGCGGCTGGTGCAGGCGCGGGAGTCGCAGCATTTCAAGACCTCCGCGGACGCCACCCGGC AACTGGGCGGCAGCCTGCAGATCCCGCCCGAGACCCACTCGACCATGTCTTCGTACTACGAAGTGCGGGGACGCCTGCGC CTGGGCGACACCGTCGTGGAGGAGCGCTCGCTGGTGTACAAGGCCGGCTCCACGGCACGCACGCTGTGGCGCGAACGCGG CGCGTTCGTGAGGAGCCCCGTTGCCGCACGATGA
Upstream 100 bases:
>100_bases CCGACGGGGTGCGCCTGCAGATCGTGCTGCCGCCGGGGCGCGCGCTCGCCGGCACGATCACCCGGGACTGGGTCACCCCC ACCAATGGCGGAGGCAAGTC
Downstream 100 bases:
>100_bases CCTGCGCCGGGCCCCGGACCTGCCGTCATGCAGCGCCCCTAAAATGGCCCGCGAATTCCATCCATGAGCACCCTCGTCCT TTTCCTGCCCCTGGGCAGCG
Product: general secretion pathway protein K
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 357; Mature: 356
Protein sequence:
>357_residues MTRRGGGRTGAVRQRGAALLAAMLTVALVATFAAAAMWQQWRAVEVEAAERARVQSAWLLVGALDWSRLILREDLFARGG DGTDHLAEPWAVPLEEARLSTFLAAGPEGATAEPDASTDTANAFLSGQITDLQSRLNVFNLVEGTALSAPALRQFGRLFD ALGLPQQELQQLAEGLRKAMAQSHAAGTGNPGTGTGTGTGAAAAPAAGPADLASVPLMPRSFTQLTWLGLSASTVAALEP YATLLPRRTPVNLNTASAQVLQASIDGLDMAGAQRLVQARESQHFKTSADATRQLGGSLQIPPETHSTMSSYYEVRGRLR LGDTVVEERSLVYKAGSTARTLWRERGAFVRSPVAAR
Sequences:
>Translated_357_residues MTRRGGGRTGAVRQRGAALLAAMLTVALVATFAAAAMWQQWRAVEVEAAERARVQSAWLLVGALDWSRLILREDLFARGG DGTDHLAEPWAVPLEEARLSTFLAAGPEGATAEPDASTDTANAFLSGQITDLQSRLNVFNLVEGTALSAPALRQFGRLFD ALGLPQQELQQLAEGLRKAMAQSHAAGTGNPGTGTGTGTGAAAAPAAGPADLASVPLMPRSFTQLTWLGLSASTVAALEP YATLLPRRTPVNLNTASAQVLQASIDGLDMAGAQRLVQARESQHFKTSADATRQLGGSLQIPPETHSTMSSYYEVRGRLR LGDTVVEERSLVYKAGSTARTLWRERGAFVRSPVAAR >Mature_356_residues TRRGGGRTGAVRQRGAALLAAMLTVALVATFAAAAMWQQWRAVEVEAAERARVQSAWLLVGALDWSRLILREDLFARGGD GTDHLAEPWAVPLEEARLSTFLAAGPEGATAEPDASTDTANAFLSGQITDLQSRLNVFNLVEGTALSAPALRQFGRLFDA LGLPQQELQQLAEGLRKAMAQSHAAGTGNPGTGTGTGTGAAAAPAAGPADLASVPLMPRSFTQLTWLGLSASTVAALEPY ATLLPRRTPVNLNTASAQVLQASIDGLDMAGAQRLVQARESQHFKTSADATRQLGGSLQIPPETHSTMSSYYEVRGRLRL GDTVVEERSLVYKAGSTARTLWRERGAFVRSPVAAR
Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]
COG id: COG3156
COG function: function code U; Type II secretory pathway, component PulK
Gene ontology:
Cell location: Cell inner membrane (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GSP K family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005628 [H]
Pfam domain/function: PF03934 GspK [H]
EC number: NA
Molecular weight: Translated: 37725; Mature: 37594
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRRGGGRTGAVRQRGAALLAAMLTVALVATFAAAAMWQQWRAVEVEAAERARVQSAWLL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE VGALDWSRLILREDLFARGGDGTDHLAEPWAVPLEEARLSTFLAAGPEGATAEPDASTDT EECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCH ANAFLSGQITDLQSRLNVFNLVEGTALSAPALRQFGRLFDALGLPQQELQQLAEGLRKAM HHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH AQSHAAGTGNPGTGTGTGTGAAAAPAAGPADLASVPLMPRSFTQLTWLGLSASTVAALEP HHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHEEECCCHHHHHHHHH YATLLPRRTPVNLNTASAQVLQASIDGLDMAGAQRLVQARESQHFKTSADATRQLGGSLQ HHHHCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEE IPPETHSTMSSYYEVRGRLRLGDTVVEERSLVYKAGSTARTLWRERGAFVRSPVAAR CCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCHHCCCCCCC >Mature Secondary Structure TRRGGGRTGAVRQRGAALLAAMLTVALVATFAAAAMWQQWRAVEVEAAERARVQSAWLL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE VGALDWSRLILREDLFARGGDGTDHLAEPWAVPLEEARLSTFLAAGPEGATAEPDASTDT EECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCH ANAFLSGQITDLQSRLNVFNLVEGTALSAPALRQFGRLFDALGLPQQELQQLAEGLRKAM HHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH AQSHAAGTGNPGTGTGTGTGAAAAPAAGPADLASVPLMPRSFTQLTWLGLSASTVAALEP HHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHEEECCCHHHHHHHHH YATLLPRRTPVNLNTASAQVLQASIDGLDMAGAQRLVQARESQHFKTSADATRQLGGSLQ HHHHCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEE IPPETHSTMSSYYEVRGRLRLGDTVVEERSLVYKAGSTARTLWRERGAFVRSPVAAR CCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1588814; 10984043 [H]