The gene/protein map for NC_008752 is currently unavailable.
Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

Click here to switch to the map view.

The map label for this gene is 120609577

Identifier: 120609577

GI number: 120609577

Start: 959095

End: 960888

Strand: Reverse

Name: 120609577

Synonym: Aave_0883

Alternate gene names: NA

Gene position: 960888-959095 (Counterclockwise)

Preceding gene: 120609578

Following gene: 120609576

Centisome position: 17.95

GC content: 72.69

Gene sequence:

>1794_bases
ATGGCCGCCCACCGATCGCACGCCCCCGCCGTCCATTACCGCGTGGAAGCCGCGCAGTTGCACGCGCGCATCTACCACGT
CACCCTCACGGTGGAGAGCCCCGCGGCGCAGCAGGAGCTGTCGCTGCCCGTGTGGATCCCCGGCAGCTACCTGGTGCGCG
AGTTCGCGAAGAACCTGCAGAACCTGCGCGCCCGCCAGGGCGGGCAGGAGGTGGCGCTCGCGCAGCGCGGCAAATGCCTC
TGGCAGGCCGACTGCCGCGAGGGCGCGCCGCTGGTGCTGACCTACGAAGTCAGCGCCTACGACAACTCGGTGCGCACGGC
GTGGCTCGATGCCTCGCGCGGCTTCTTCAACGGCACGAGCCTGTGCCTGCGCGTGCATGGCCAGGAAGCGGCCCGCCACG
ACCTGGAGATCGTCGCCACGCCGGAGGTGTCGCACTGGTCCGTGGCCACGGGCCTCACGGCGGAGAAGACCACGCGCGCG
GGCTTCGGCACCTACCGCGCGGCCTCGTACGACGAGCTGGTGGACTGCCCGGTGGAGATGGGGCCCTTCTGGAGCGCCCG
CTTCACCGCCTGCGGCGTGCCGCACCGCCTGGTCGTGGCCGGCGCGGCGCCCTCGTTCGACGGCGAGCGCCTGGTGGCCG
ATACGCGCCGCATCTGCGAGGCGGGCATCCGCTTCTGGCATGGGGCGGGCAAGCCGCCCTATGCGCAGTACCTGTTCATG
CTCAACGTGGTGGACGACGGCTACGGCGGGCTGGAGCACCGCAACTCGACAGCCCTGGTCTGCGGCCGCCGCGACCTGCC
CCGCCAGGGCGAGGCCAAGGCGCCCGAGGGGTACACCACGCTGCTCGGGCTCATCAGCCACGAACATTTCCACACCTGGA
ACGTCAAGCGCCTGCGCCCGGCCGAGCTGGCGCGCTACGACTACACCCAGGAGAACTACACCCGCCTGCTGTGGTTCTTC
GAGGGCTTCACCAGCTACTACGACGACCTGCTGCTGCGCCGCGCCGGGCTGATCGACGACGCCACCTACCTGCGCCTGCT
CGCCAAGAACATCAACCAGGTGCTGCAGACACCGGGGCGCCGCGTGCAGAGCGTGGCCGACGCCAGCTTCGACGCCTGGG
TGAAGTACTACCGCCAGGACGAGAACACGCCGAACGCCACGGTGAGCTACTACACCAAGGGCGCGCTCGTCGGCCTGTGC
CTGGACCTGGCGCTGCGCCGCGAGGGCCGCACCACGCTCGACGACGTGATGCGCGCGCTCTGGGACCGCTGCGATGCCGG
CCCCATGTCGGAAGACGACCTGCTGGCGGTGCTCGAAGCCCTCTCGGGCCGCCCGTTCGCGCGCGAGATCGCCGAATGGG
TGCACGGCACCGGCGACCTGCCCCTGGCCGAGATGCTGGCCGCGCACGGCGTGGCCCTGCGCGCGGAAGCGGCGCAGCCC
GCGCAGCGGCTGGGCCTGCGGGTGTCCGAGGGCCAGGGCCTGCAGGTGAAGGTGGTGCTGCGCGGCGGCCTGGCCGAAGA
GGCGGGCTTTTCCGCGGGCGACGAGTGGCTGGCCGTGGAGGCGCAGGGCGAGACCTGGCGCGTGCAGCGGCTGGACGACG
TCGCGCTCTACGCCGGCCGCGAGAAGCGCGTCACCGCGCTGGTGTCCCGCGACCGCCGCGTGCTGCGGCTGCCGCTGGCG
CTGGAACGCGAGGGTGGCGCGCCGGACGACACCGTCGCGCTGGCGCTGGCGGATGCCCCCCTGGCGCGGCGCTGGCTGGA
CGGCCAGCCGGACACGGGCACGGCCGCCGGGTAG

Upstream 100 bases:

>100_bases
GACGCGCGCGAGGTGGAAAAGCGCCTCGCCGACGCGGGATCGGGCGCCGGCCCGGCCCCCGCCACGAACTGATCCTTTTC
CCGCCCCTCCCGGATACCGC

Downstream 100 bases:

>100_bases
CCTGCGGGACGGGCGCGAAAGGCGGCCCTTGGGTATAGTCGTCCGCACCACAACGACACCCAGGAGATACCCCCTTGGCC
TACGAAGTCATCGAGGTCCG

Product: peptidase M61 domain-containing protein

Products: NA

Alternate protein names: Peptidase M; Protease; M61 Family Peptidase; Glycyl Aminopeptidase; M61 Family Glycyl Aminopeptidase; Pdz/Dhr/Glgf; M61 Glycyl Aminopeptidase; Trypsin-Like Serine Protease; Metallopeptidase; Aminopeptidase N Family Protein; PDZ Domain-Containing Protein; PDZ Domain Family Protein; Protease With C-Terminal PDZ Domain-Containing Protein; Glycyl Aminopeptidase Protein; PDZ/DHR/GLGFPeptidase M; Aminopeptidase; Signaling Protein; M61 Glycyl Aminopeptidase Protein; PDZ Domain Protein; M61 Glycyl Aminopeptidase Family Protein

Number of amino acids: Translated: 597; Mature: 596

Protein sequence:

>597_residues
MAAHRSHAPAVHYRVEAAQLHARIYHVTLTVESPAAQQELSLPVWIPGSYLVREFAKNLQNLRARQGGQEVALAQRGKCL
WQADCREGAPLVLTYEVSAYDNSVRTAWLDASRGFFNGTSLCLRVHGQEAARHDLEIVATPEVSHWSVATGLTAEKTTRA
GFGTYRAASYDELVDCPVEMGPFWSARFTACGVPHRLVVAGAAPSFDGERLVADTRRICEAGIRFWHGAGKPPYAQYLFM
LNVVDDGYGGLEHRNSTALVCGRRDLPRQGEAKAPEGYTTLLGLISHEHFHTWNVKRLRPAELARYDYTQENYTRLLWFF
EGFTSYYDDLLLRRAGLIDDATYLRLLAKNINQVLQTPGRRVQSVADASFDAWVKYYRQDENTPNATVSYYTKGALVGLC
LDLALRREGRTTLDDVMRALWDRCDAGPMSEDDLLAVLEALSGRPFAREIAEWVHGTGDLPLAEMLAAHGVALRAEAAQP
AQRLGLRVSEGQGLQVKVVLRGGLAEEAGFSAGDEWLAVEAQGETWRVQRLDDVALYAGREKRVTALVSRDRRVLRLPLA
LEREGGAPDDTVALALADAPLARRWLDGQPDTGTAAG

Sequences:

>Translated_597_residues
MAAHRSHAPAVHYRVEAAQLHARIYHVTLTVESPAAQQELSLPVWIPGSYLVREFAKNLQNLRARQGGQEVALAQRGKCL
WQADCREGAPLVLTYEVSAYDNSVRTAWLDASRGFFNGTSLCLRVHGQEAARHDLEIVATPEVSHWSVATGLTAEKTTRA
GFGTYRAASYDELVDCPVEMGPFWSARFTACGVPHRLVVAGAAPSFDGERLVADTRRICEAGIRFWHGAGKPPYAQYLFM
LNVVDDGYGGLEHRNSTALVCGRRDLPRQGEAKAPEGYTTLLGLISHEHFHTWNVKRLRPAELARYDYTQENYTRLLWFF
EGFTSYYDDLLLRRAGLIDDATYLRLLAKNINQVLQTPGRRVQSVADASFDAWVKYYRQDENTPNATVSYYTKGALVGLC
LDLALRREGRTTLDDVMRALWDRCDAGPMSEDDLLAVLEALSGRPFAREIAEWVHGTGDLPLAEMLAAHGVALRAEAAQP
AQRLGLRVSEGQGLQVKVVLRGGLAEEAGFSAGDEWLAVEAQGETWRVQRLDDVALYAGREKRVTALVSRDRRVLRLPLA
LEREGGAPDDTVALALADAPLARRWLDGQPDTGTAAG
>Mature_596_residues
AAHRSHAPAVHYRVEAAQLHARIYHVTLTVESPAAQQELSLPVWIPGSYLVREFAKNLQNLRARQGGQEVALAQRGKCLW
QADCREGAPLVLTYEVSAYDNSVRTAWLDASRGFFNGTSLCLRVHGQEAARHDLEIVATPEVSHWSVATGLTAEKTTRAG
FGTYRAASYDELVDCPVEMGPFWSARFTACGVPHRLVVAGAAPSFDGERLVADTRRICEAGIRFWHGAGKPPYAQYLFML
NVVDDGYGGLEHRNSTALVCGRRDLPRQGEAKAPEGYTTLLGLISHEHFHTWNVKRLRPAELARYDYTQENYTRLLWFFE
GFTSYYDDLLLRRAGLIDDATYLRLLAKNINQVLQTPGRRVQSVADASFDAWVKYYRQDENTPNATVSYYTKGALVGLCL
DLALRREGRTTLDDVMRALWDRCDAGPMSEDDLLAVLEALSGRPFAREIAEWVHGTGDLPLAEMLAAHGVALRAEAAQPA
QRLGLRVSEGQGLQVKVVLRGGLAEEAGFSAGDEWLAVEAQGETWRVQRLDDVALYAGREKRVTALVSRDRRVLRLPLAL
EREGGAPDDTVALALADAPLARRWLDGQPDTGTAAG

Specific function: Unknown

COG id: COG3975

COG function: function code R; Predicted protease with the C-terminal PDZ domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 66038; Mature: 65907

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAHRSHAPAVHYRVEAAQLHARIYHVTLTVESPAAQQELSLPVWIPGSYLVREFAKNLQ
CCCCCCCCCEEEEEEHHHHEEEEEEEEEEEECCCCCHHHCCCEEECCHHHHHHHHHHHHH
NLRARQGGQEVALAQRGKCLWQADCREGAPLVLTYEVSAYDNSVRTAWLDASRGFFNGTS
HHHHHCCCCHHHHHHCCCEEEECCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCE
LCLRVHGQEAARHDLEIVATPEVSHWSVATGLTAEKTTRAGFGTYRAASYDELVDCPVEM
EEEEECCCHHCCCCCEEEECCCCCCEEEECCCCCCHHCCCCCCCCCCCCHHHHHCCCCCC
GPFWSARFTACGVPHRLVVAGAAPSFDGERLVADTRRICEAGIRFWHGAGKPPYAQYLFM
CCCCCCCHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHEEE
LNVVDDGYGGLEHRNSTALVCGRRDLPRQGEAKAPEGYTTLLGLISHEHFHTWNVKRLRP
EEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCEEECCCCCCCH
AELARYDYTQENYTRLLWFFEGFTSYYDDLLLRRAGLIDDATYLRLLAKNINQVLQTPGR
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCH
RVQSVADASFDAWVKYYRQDENTPNATVSYYTKGALVGLCLDLALRREGRTTLDDVMRAL
HHHHHHCCCHHHHHHHHHCCCCCCCCEEEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHH
WDRCDAGPMSEDDLLAVLEALSGRPFAREIAEWVHGTGDLPLAEMLAAHGVALRAEAAQP
HHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHCCCEEEEHHCCH
AQRLGLRVSEGQGLQVKVVLRGGLAEEAGFSAGDEWLAVEAQGETWRVQRLDDVALYAGR
HHHHCEEEECCCCCEEEEEEECCCHHHCCCCCCCCEEEEEECCCEEEEEECCHHHHHCCC
EKRVTALVSRDRRVLRLPLALEREGGAPDDTVALALADAPLARRWLDGQPDTGTAAG
CHHHHHHHHCCCEEEECCEEEECCCCCCCCCEEEEEECCHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
AAHRSHAPAVHYRVEAAQLHARIYHVTLTVESPAAQQELSLPVWIPGSYLVREFAKNLQ
CCCCCCCCEEEEEEHHHHEEEEEEEEEEEECCCCCHHHCCCEEECCHHHHHHHHHHHHH
NLRARQGGQEVALAQRGKCLWQADCREGAPLVLTYEVSAYDNSVRTAWLDASRGFFNGTS
HHHHHCCCCHHHHHHCCCEEEECCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCE
LCLRVHGQEAARHDLEIVATPEVSHWSVATGLTAEKTTRAGFGTYRAASYDELVDCPVEM
EEEEECCCHHCCCCCEEEECCCCCCEEEECCCCCCHHCCCCCCCCCCCCHHHHHCCCCCC
GPFWSARFTACGVPHRLVVAGAAPSFDGERLVADTRRICEAGIRFWHGAGKPPYAQYLFM
CCCCCCCHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHEEE
LNVVDDGYGGLEHRNSTALVCGRRDLPRQGEAKAPEGYTTLLGLISHEHFHTWNVKRLRP
EEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCEEECCCCCCCH
AELARYDYTQENYTRLLWFFEGFTSYYDDLLLRRAGLIDDATYLRLLAKNINQVLQTPGR
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCH
RVQSVADASFDAWVKYYRQDENTPNATVSYYTKGALVGLCLDLALRREGRTTLDDVMRAL
HHHHHHCCCHHHHHHHHHCCCCCCCCEEEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHH
WDRCDAGPMSEDDLLAVLEALSGRPFAREIAEWVHGTGDLPLAEMLAAHGVALRAEAAQP
HHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHCCCEEEEHHCCH
AQRLGLRVSEGQGLQVKVVLRGGLAEEAGFSAGDEWLAVEAQGETWRVQRLDDVALYAGR
HHHHCEEEECCCCCEEEEEEECCCHHHCCCCCCCCEEEEEECCCEEEEEECCHHHHHCCC
EKRVTALVSRDRRVLRLPLALEREGGAPDDTVALALADAPLARRWLDGQPDTGTAAG
CHHHHHHHHCCCEEEECCEEEECCCCCCCCCEEEEEECCHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA