| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is ssuD [H]
Identifier: 120609572
GI number: 120609572
Start: 954873
End: 956009
Strand: Reverse
Name: ssuD [H]
Synonym: Aave_0878
Alternate gene names: 120609572
Gene position: 956009-954873 (Counterclockwise)
Preceding gene: 120609573
Following gene: 120609571
Centisome position: 17.86
GC content: 67.72
Gene sequence:
>1137_bases ATGAGCACATCCCGCAACGAACCCGTCCAATTCGCCTACTGGGTGCCGAACGTCAGCGGCGGCCTGGTCGTGAGCACCAT CGAGCAGCGCACCGACTGGAGCCTGGAATACAACCAGCGGCTGGCGGTGGCGGCGGAGAAAGCCGGCTTCGAATACGCCC TGAGCCAGATCCGCTTCACGGCGGGCTACGGGGCGGAGCACCAGCACGAGTCCGTGTCGTTCAGCCAGGCCCTGCTGCAC GCCACCACGCGGCTGAAGGTGCTGGCCGCCATCCTGCCGGGCCCGTGGAACCCGGCCGTGGTGGCCAAGCAGATCGCCAC CATCGACCACATCTCGGGCGGCCGCATCGGCATCAACGTGGTGAGCGGCTGGTTCAAGGGCGAGTTCCAGGCCATCGGCG AGCCCTGGCTGGAGCACGACGAACGCTACCGCCGCTCCAATGAATTCATCCGCGCGCTCAAGGGCATCTGGACGCAGGAC CGCTTCACCTTCAAGGGCGACTTCTACCGCTTCAACGACTACACCCTCAGCCCCAAGCCGCTGCAGAAGCCCCATCCGGA GATCTTCCAGGGCGGCAGCTCGCGCGCCGCACGCGACAACGCGGCCAGCGTGTCCGACTGGTACTTCACCAACGGCAACA CCCCCGAGAACCTGAAGGCCCAGATCGACGACATCCAGGCCAAGGCCCGGGCCAACGGCCACACGGTGCGCATCGGGGTG AACGCCTTCGTGATCGCCCGCGACACCGAGGAAGAGGCGCAGGCCGTGCTGCAGGACATCATCCGCCATGCGCACGTGGA AGCGGTGCATGCCTTCGGGGACGCCGTGAAGCAGGCCGGCCGCGCTTCCCCGGAAGGCGAAGGCAACTGGGCGAAGTCCA CCTTCGAGGACCTCGTGCAATACAACGACGGCTTCCGCACCAACCTGATCGGCACGCCGCGGCAGATCGCCGAGCGCATC GTCGCGCTCAAGGCCATCGGCGTGGACCTGGTGCTGACCGGCTTCCTGCACTTCATCGAAGAGGTGGAGTACTTCGGCCG CGAGGTGCTGCCGCTGGTGCGCGAACTGGAGGCGCGCCAGGCCTCGGCCCAGCCGCAGTCCCGGCCGCAGCCCGCCCTGG AGGCGGAGGCGGCCTGA
Upstream 100 bases:
>100_bases GCGCGCGGGCCGCGAGACCTCCGCGCCCGCGCGCCCCGTGCTGGCCGCCGTGGCCTGAGGGCGCACGCCTGTCCTCCATC CCATCCAAGGAGCCTTCCCC
Downstream 100 bases:
>100_bases GCCAGCGCCCCGCCCCGCACATCCGCGCCCACGACCGATCGAGAGGAATCCGCCATGTCCGCCGTGCTCCAGAACCCCTC CACCGAACAGCCCGTCCGCC
Product: luciferase family protein
Products: NA
Alternate protein names: FMNH2-dependent aliphatic sulfonate monooxygenase [H]
Number of amino acids: Translated: 378; Mature: 377
Protein sequence:
>378_residues MSTSRNEPVQFAYWVPNVSGGLVVSTIEQRTDWSLEYNQRLAVAAEKAGFEYALSQIRFTAGYGAEHQHESVSFSQALLH ATTRLKVLAAILPGPWNPAVVAKQIATIDHISGGRIGINVVSGWFKGEFQAIGEPWLEHDERYRRSNEFIRALKGIWTQD RFTFKGDFYRFNDYTLSPKPLQKPHPEIFQGGSSRAARDNAASVSDWYFTNGNTPENLKAQIDDIQAKARANGHTVRIGV NAFVIARDTEEEAQAVLQDIIRHAHVEAVHAFGDAVKQAGRASPEGEGNWAKSTFEDLVQYNDGFRTNLIGTPRQIAERI VALKAIGVDLVLTGFLHFIEEVEYFGREVLPLVRELEARQASAQPQSRPQPALEAEAA
Sequences:
>Translated_378_residues MSTSRNEPVQFAYWVPNVSGGLVVSTIEQRTDWSLEYNQRLAVAAEKAGFEYALSQIRFTAGYGAEHQHESVSFSQALLH ATTRLKVLAAILPGPWNPAVVAKQIATIDHISGGRIGINVVSGWFKGEFQAIGEPWLEHDERYRRSNEFIRALKGIWTQD RFTFKGDFYRFNDYTLSPKPLQKPHPEIFQGGSSRAARDNAASVSDWYFTNGNTPENLKAQIDDIQAKARANGHTVRIGV NAFVIARDTEEEAQAVLQDIIRHAHVEAVHAFGDAVKQAGRASPEGEGNWAKSTFEDLVQYNDGFRTNLIGTPRQIAERI VALKAIGVDLVLTGFLHFIEEVEYFGREVLPLVRELEARQASAQPQSRPQPALEAEAA >Mature_377_residues STSRNEPVQFAYWVPNVSGGLVVSTIEQRTDWSLEYNQRLAVAAEKAGFEYALSQIRFTAGYGAEHQHESVSFSQALLHA TTRLKVLAAILPGPWNPAVVAKQIATIDHISGGRIGINVVSGWFKGEFQAIGEPWLEHDERYRRSNEFIRALKGIWTQDR FTFKGDFYRFNDYTLSPKPLQKPHPEIFQGGSSRAARDNAASVSDWYFTNGNTPENLKAQIDDIQAKARANGHTVRIGVN AFVIARDTEEEAQAVLQDIIRHAHVEAVHAFGDAVKQAGRASPEGEGNWAKSTFEDLVQYNDGFRTNLIGTPRQIAERIV ALKAIGVDLVLTGFLHFIEEVEYFGREVLPLVRELEARQASAQPQSRPQPALEAEAA
Specific function: Catalyzes the desulfonation of aliphatic sulfonates [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the SsuD family [H]
Homologues:
Organism=Escherichia coli, GI1787166, Length=357, Percent_Identity=30.2521008403361, Blast_Score=133, Evalue=2e-32, Organism=Escherichia coli, GI1787247, Length=358, Percent_Identity=28.4916201117318, Blast_Score=128, Evalue=8e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019911 - InterPro: IPR011251 - InterPro: IPR016048 [H]
Pfam domain/function: PF00296 Bac_luciferase [H]
EC number: =1.14.14.5 [H]
Molecular weight: Translated: 42084; Mature: 41953
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTSRNEPVQFAYWVPNVSGGLVVSTIEQRTDWSLEYNQRLAVAAEKAGFEYALSQIRFT CCCCCCCCEEEEEECCCCCCCEEEEEHHHCCCCCEECCCEEEEHHHHCCHHHHHHHHHEE AGYGAEHQHESVSFSQALLHATTRLKVLAAILPGPWNPAVVAKQIATIDHISGGRIGINV CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEEE VSGWFKGEFQAIGEPWLEHDERYRRSNEFIRALKGIWTQDRFTFKGDFYRFNDYTLSPKP ECCHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCEEEECCEECCCCC LQKPHPEIFQGGSSRAARDNAASVSDWYFTNGNTPENLKAQIDDIQAKARANGHTVRIGV CCCCCHHHHCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEC NAFVIARDTEEEAQAVLQDIIRHAHVEAVHAFGDAVKQAGRASPEGEGNWAKSTFEDLVQ EEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH YNDGFRTNLIGTPRQIAERIVALKAIGVDLVLTGFLHFIEEVEYFGREVLPLVRELEARQ HCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASAQPQSRPQPALEAEAA HCCCCCCCCCCCCCCCCC >Mature Secondary Structure STSRNEPVQFAYWVPNVSGGLVVSTIEQRTDWSLEYNQRLAVAAEKAGFEYALSQIRFT CCCCCCCEEEEEECCCCCCCEEEEEHHHCCCCCEECCCEEEEHHHHCCHHHHHHHHHEE AGYGAEHQHESVSFSQALLHATTRLKVLAAILPGPWNPAVVAKQIATIDHISGGRIGINV CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEEE VSGWFKGEFQAIGEPWLEHDERYRRSNEFIRALKGIWTQDRFTFKGDFYRFNDYTLSPKP ECCHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCEEEECCEECCCCC LQKPHPEIFQGGSSRAARDNAASVSDWYFTNGNTPENLKAQIDDIQAKARANGHTVRIGV CCCCCHHHHCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEC NAFVIARDTEEEAQAVLQDIIRHAHVEAVHAFGDAVKQAGRASPEGEGNWAKSTFEDLVQ EEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH YNDGFRTNLIGTPRQIAERIVALKAIGVDLVLTGFLHFIEEVEYFGREVLPLVRELEARQ HCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASAQPQSRPQPALEAEAA HCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA