Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120609344
Identifier: 120609344
GI number: 120609344
Start: 694068
End: 695237
Strand: Direct
Name: 120609344
Synonym: Aave_0644
Alternate gene names: NA
Gene position: 694068-695237 (Clockwise)
Preceding gene: 120609341
Following gene: 120609349
Centisome position: 12.97
GC content: 76.24
Gene sequence:
>1170_bases ATGGAGGACGTGGTGGACATGGCGCTGGGGGCGCCGGGAGGGGCGCCTGGCGCCGGGAGCTGGGGCGTCGCCGAAGGCGG GGAGCGTAGCGAAGGGTACAGCCCCGGGAGTCCGGGCCGGCCGGTGGCGGAGGATCCCATGGAGAGCGCCATCGCACAGC TGCGGCTGGCGTGGAGCCTCAAGGACCCCGATGTGACGGCGGACCGCTGGATCGCGTCGGCCGAATGGCCTTTCCGCGCG ATGGCCCTGGCGCTGGAGGCGCGGCGGCGCGTTCTCTGGGGGCGGCTGTCGGCCCTGGGGGCGGCGCGCATGCAGGCCCA GGGGGAGGCGCTGGGCACGGTGCTGGCCCTCGCGCGCCGGCTGCCGCGCGGGATGGCGCCCACGCGCGGCGCGGGGCTGG GTGGCGCGCCGGAGCAGGGCGCTCCGCGGCTGGAGGATCTGGCGGGAGTGGTGGGCCGTGCCACGGACCTTCGCAGCTAT GGCTGGCAGGCCCTGTCTCCCGGAGCCATGGTGGCCTGGGCGCTGGGGCATGGGGCCGGCGCGCTGGGCACGGCAGCGGA GAACCCGACCGTGGCCTGGCTGAGTGGCGGCCCCGTGCCGGTGGCGAACGCGCAGGGGCCCTGCCTGGTGCTCGGGGGAG TGATCGACGCGGTGGTGCTGCGTGCGCTGCGCGCCAGTGCGGAAGGCCGGGTGGACGAGGCGCTGGGAATCGCCCGGATG CACTCCGCACCGCTGCAGGACGCGGCGGAGCAGGTGGAGTGCGCCGCTGCCGTGCTGGAGGCGATCGACCTGCGCGTGCA GGAAATCACCTGGCTGCTCGGGCGCCTGGACGCGCGCCTCGGTCCGGCGGCGCACCGCGCCGGGATCGTGCTGGCGCTGC GGGAGGCGCGCCAGGCACGTTCCGTGGTTCCGCAGGGGCGTGGTTCGGGGCCCGGCCCGCAGGACACCGGGGCAGCCACG GCGAAGGCGGCCGGGCCGGCGCTGGCGGGCCCCGCGCCGGAGCTGTTGCCGGGGGAGCGTGCGGTGCTGGAAATGCTGAC AACGCTGGGCGGGGCGCTGTACCGCACCGCGACGGTGCCCCTGTTGGACGATCTGGGCCGCCTGACACGGCAGAGCGGTG AAACGGTGGCCCGCATGCGGCGCTGGCTGCTGATGACGCCGGAGGGATAG
Upstream 100 bases:
>100_bases AACACCGTGATTTGCAGTTACGGATCGGGCCGGAGGCGGCATCCGGGGGCGGCGGATGCATTGCCTGGAGGCGGATCCAT GACCAGGGAAAGGGCGTGCG
Downstream 100 bases:
>100_bases CGGCCTGCCGGTGGGAGGGTGCGACCCCGCCGCGGCCCCTCGGTGCCGCACCGGCGATGCACGGTATCGCCGCAGGCGGT ACCCGGGGTGCGACAGCATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 389; Mature: 389
Protein sequence:
>389_residues MEDVVDMALGAPGGAPGAGSWGVAEGGERSEGYSPGSPGRPVAEDPMESAIAQLRLAWSLKDPDVTADRWIASAEWPFRA MALALEARRRVLWGRLSALGAARMQAQGEALGTVLALARRLPRGMAPTRGAGLGGAPEQGAPRLEDLAGVVGRATDLRSY GWQALSPGAMVAWALGHGAGALGTAAENPTVAWLSGGPVPVANAQGPCLVLGGVIDAVVLRALRASAEGRVDEALGIARM HSAPLQDAAEQVECAAAVLEAIDLRVQEITWLLGRLDARLGPAAHRAGIVLALREARQARSVVPQGRGSGPGPQDTGAAT AKAAGPALAGPAPELLPGERAVLEMLTTLGGALYRTATVPLLDDLGRLTRQSGETVARMRRWLLMTPEG
Sequences:
>Translated_389_residues MEDVVDMALGAPGGAPGAGSWGVAEGGERSEGYSPGSPGRPVAEDPMESAIAQLRLAWSLKDPDVTADRWIASAEWPFRA MALALEARRRVLWGRLSALGAARMQAQGEALGTVLALARRLPRGMAPTRGAGLGGAPEQGAPRLEDLAGVVGRATDLRSY GWQALSPGAMVAWALGHGAGALGTAAENPTVAWLSGGPVPVANAQGPCLVLGGVIDAVVLRALRASAEGRVDEALGIARM HSAPLQDAAEQVECAAAVLEAIDLRVQEITWLLGRLDARLGPAAHRAGIVLALREARQARSVVPQGRGSGPGPQDTGAAT AKAAGPALAGPAPELLPGERAVLEMLTTLGGALYRTATVPLLDDLGRLTRQSGETVARMRRWLLMTPEG >Mature_389_residues MEDVVDMALGAPGGAPGAGSWGVAEGGERSEGYSPGSPGRPVAEDPMESAIAQLRLAWSLKDPDVTADRWIASAEWPFRA MALALEARRRVLWGRLSALGAARMQAQGEALGTVLALARRLPRGMAPTRGAGLGGAPEQGAPRLEDLAGVVGRATDLRSY GWQALSPGAMVAWALGHGAGALGTAAENPTVAWLSGGPVPVANAQGPCLVLGGVIDAVVLRALRASAEGRVDEALGIARM HSAPLQDAAEQVECAAAVLEAIDLRVQEITWLLGRLDARLGPAAHRAGIVLALREARQARSVVPQGRGSGPGPQDTGAAT AKAAGPALAGPAPELLPGERAVLEMLTTLGGALYRTATVPLLDDLGRLTRQSGETVARMRRWLLMTPEG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40006; Mature: 40006
Theoretical pI: Translated: 6.32; Mature: 6.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEDVVDMALGAPGGAPGAGSWGVAEGGERSEGYSPGSPGRPVAEDPMESAIAQLRLAWSL CCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEEC KDPDVTADRWIASAEWPFRAMALALEARRRVLWGRLSALGAARMQAQGEALGTVLALARR CCCCCCHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LPRGMAPTRGAGLGGAPEQGAPRLEDLAGVVGRATDLRSYGWQALSPGAMVAWALGHGAG CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHCCCC ALGTAAENPTVAWLSGGPVPVANAQGPCLVLGGVIDAVVLRALRASAEGRVDEALGIARM CCCCCCCCCEEEEECCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH HSAPLQDAAEQVECAAAVLEAIDLRVQEITWLLGRLDARLGPAAHRAGIVLALREARQAR HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH SVVPQGRGSGPGPQDTGAATAKAAGPALAGPAPELLPGERAVLEMLTTLGGALYRTATVP HCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCH LLDDLGRLTRQSGETVARMRRWLLMTPEG HHHHHHHHHHHCCHHHHHHHHHHCCCCCC >Mature Secondary Structure MEDVVDMALGAPGGAPGAGSWGVAEGGERSEGYSPGSPGRPVAEDPMESAIAQLRLAWSL CCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEEC KDPDVTADRWIASAEWPFRAMALALEARRRVLWGRLSALGAARMQAQGEALGTVLALARR CCCCCCHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LPRGMAPTRGAGLGGAPEQGAPRLEDLAGVVGRATDLRSYGWQALSPGAMVAWALGHGAG CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHCCCC ALGTAAENPTVAWLSGGPVPVANAQGPCLVLGGVIDAVVLRALRASAEGRVDEALGIARM CCCCCCCCCEEEEECCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH HSAPLQDAAEQVECAAAVLEAIDLRVQEITWLLGRLDARLGPAAHRAGIVLALREARQAR HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH SVVPQGRGSGPGPQDTGAATAKAAGPALAGPAPELLPGERAVLEMLTTLGGALYRTATVP HCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCH LLDDLGRLTRQSGETVARMRRWLLMTPEG HHHHHHHHHHHCCHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA