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The map label for this gene is yurN [H]

Identifier: 120609306

GI number: 120609306

Start: 663569

End: 664465

Strand: Direct

Name: yurN [H]

Synonym: Aave_0606

Alternate gene names: 120609306

Gene position: 663569-664465 (Clockwise)

Preceding gene: 120609305

Following gene: 120609307

Centisome position: 12.4

GC content: 66.22

Gene sequence:

>897_bases
ATGAGCCAGACCACCAAGCCCGTGAACCAGAAGGCCTGGTTCCTCATCCTGCCCGTCATCCTCTGCGTGGCCTTCTCGGC
CATCCTGCCGCTGATGACCGTGGTGAATTACTCGGTGCAGGACATCATCTCGCCCGAGCGCCGCGTGTTCGTCGGCACCG
AATGGTTCGCGCAGGTCATGCGCGACGAGGAACTGCACGGCGCGCTGCTGCGCCAGCTCGGCTTCTCGCTGGCGGTGCTG
GCGGTGGAGATCCCGCTCGGCATCTGCCTGGCGCTCTCCATGCCCACGCAGGGCTGGAAGTCCTCCGCCGTGCTGGTCAC
CGTCGCCCTGTCGCTGCTCATCCCGTGGAACGTGGTCGGCACCATCTGGCAGATCTACGGACGCGCCGACATCGGCCTGC
TCGGCGCCGCGCTGCAGTACGTGGGCATCGACTACAACTACACCGGCAATGCCACGCACGCCTGGCTCACCGTGCTCGCC
ATGGACGTCTGGCACTGGACGCCGCTGGTCGCGCTGCTGTGCTTCGCCGGCCTGCGCTCCATTCCCGACGCGTACTACCA
GGCAGCGCGCATCGACGGCGCCAGCAAGTGGGCCGTGTTCCGCTACATCCAGCTGCCCAAGATGCGCGGCGTGCTCATGA
TCGCCGTGCTGCTGCGCTTCATGGACAGCTTCATGATCTACACCGAGCCCTTCGTGCTCACCGGCGGCGGCCCCGGCAAC
GCCACCACCTTCCTCAGCCAGTACCTCACGCAGAAGGCCGTCGGCCAGTTCGACCTCGGCCCCGCCGCCGCCTTCTCGCT
GATCTACTTCCTCATCATCCTGCTGCTGTGCTTCATCCTCTACAACTGGATGCAGCGCGTGGGCACCGACACCGCCACGG
AGGACGGCCATGCATGA

Upstream 100 bases:

>100_bases
GCGTCACGCCCGCCGAGGTGCTGCCCGCGCCCGGCGGCACCGTCTGGCTGCAGGTGCTGGGCGCCCACACCTGCTTCTAC
CGCAACGAGGAACTGTTGGC

Downstream 100 bases:

>100_bases
GAACCGCTTCCGCAAGCGCACCCTGTTCCTGATCGCCTACCTCGTCTTCGCGCTCCTGCCCATCTACTGGATGGTGAACA
TGAGCTTCAAGACGAACTCC

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 298; Mature: 297

Protein sequence:

>298_residues
MSQTTKPVNQKAWFLILPVILCVAFSAILPLMTVVNYSVQDIISPERRVFVGTEWFAQVMRDEELHGALLRQLGFSLAVL
AVEIPLGICLALSMPTQGWKSSAVLVTVALSLLIPWNVVGTIWQIYGRADIGLLGAALQYVGIDYNYTGNATHAWLTVLA
MDVWHWTPLVALLCFAGLRSIPDAYYQAARIDGASKWAVFRYIQLPKMRGVLMIAVLLRFMDSFMIYTEPFVLTGGGPGN
ATTFLSQYLTQKAVGQFDLGPAAAFSLIYFLIILLLCFILYNWMQRVGTDTATEDGHA

Sequences:

>Translated_298_residues
MSQTTKPVNQKAWFLILPVILCVAFSAILPLMTVVNYSVQDIISPERRVFVGTEWFAQVMRDEELHGALLRQLGFSLAVL
AVEIPLGICLALSMPTQGWKSSAVLVTVALSLLIPWNVVGTIWQIYGRADIGLLGAALQYVGIDYNYTGNATHAWLTVLA
MDVWHWTPLVALLCFAGLRSIPDAYYQAARIDGASKWAVFRYIQLPKMRGVLMIAVLLRFMDSFMIYTEPFVLTGGGPGN
ATTFLSQYLTQKAVGQFDLGPAAAFSLIYFLIILLLCFILYNWMQRVGTDTATEDGHA
>Mature_297_residues
SQTTKPVNQKAWFLILPVILCVAFSAILPLMTVVNYSVQDIISPERRVFVGTEWFAQVMRDEELHGALLRQLGFSLAVLA
VEIPLGICLALSMPTQGWKSSAVLVTVALSLLIPWNVVGTIWQIYGRADIGLLGAALQYVGIDYNYTGNATHAWLTVLAM
DVWHWTPLVALLCFAGLRSIPDAYYQAARIDGASKWAVFRYIQLPKMRGVLMIAVLLRFMDSFMIYTEPFVLTGGGPGNA
TTFLSQYLTQKAVGQFDLGPAAAFSLIYFLIILLLCFILYNWMQRVGTDTATEDGHA

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787570, Length=233, Percent_Identity=25.7510729613734, Blast_Score=68, Evalue=9e-13,
Organism=Escherichia coli, GI1789861, Length=298, Percent_Identity=24.1610738255034, Blast_Score=63, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33023; Mature: 32892

Theoretical pI: Translated: 6.92; Mature: 6.92

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQTTKPVNQKAWFLILPVILCVAFSAILPLMTVVNYSVQDIISPERRVFVGTEWFAQVM
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHH
RDEELHGALLRQLGFSLAVLAVEIPLGICLALSMPTQGWKSSAVLVTVALSLLIPWNVVG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
TIWQIYGRADIGLLGAALQYVGIDYNYTGNATHAWLTVLAMDVWHWTPLVALLCFAGLRS
HHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IPDAYYQAARIDGASKWAVFRYIQLPKMRGVLMIAVLLRFMDSFMIYTEPFVLTGGGPGN
CCHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCH
ATTFLSQYLTQKAVGQFDLGPAAAFSLIYFLIILLLCFILYNWMQRVGTDTATEDGHA
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
SQTTKPVNQKAWFLILPVILCVAFSAILPLMTVVNYSVQDIISPERRVFVGTEWFAQVM
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHH
RDEELHGALLRQLGFSLAVLAVEIPLGICLALSMPTQGWKSSAVLVTVALSLLIPWNVVG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
TIWQIYGRADIGLLGAALQYVGIDYNYTGNATHAWLTVLAMDVWHWTPLVALLCFAGLRS
HHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IPDAYYQAARIDGASKWAVFRYIQLPKMRGVLMIAVLLRFMDSFMIYTEPFVLTGGGPGN
CCHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCH
ATTFLSQYLTQKAVGQFDLGPAAAFSLIYFLIILLLCFILYNWMQRVGTDTATEDGHA
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]