Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120609276
Identifier: 120609276
GI number: 120609276
Start: 625452
End: 626453
Strand: Direct
Name: 120609276
Synonym: Aave_0576
Alternate gene names: NA
Gene position: 625452-626453 (Clockwise)
Preceding gene: 120609275
Following gene: 120609279
Centisome position: 11.68
GC content: 67.76
Gene sequence:
>1002_bases ATGACCGAGATTTCCCACAACGCCCCCATCCCCCGACGTGCATGCCTGCGCTGGACTGCCGGCGCGGGCATGGCATGGCT CGCCGGCGGGAGCCGTGCGGCCGACTATCCGTCCAAGCCGATCCGCCTGGTCGTGCCGGCCCCGCCCGGTGGTGGTACCG ACATGATGTCGCGGCTTCTCTCGAATGCCCTGAACTCCACGTTGGGCTGGACGGTCGTGGTGGACAACGTGCCGGGCGCC GGGGGAAACATCGGCTTGGACAAGGCGGCCAAATCCGCGCCTGACGGCTACACCCTGGCGATGGGCGAGTCCAGCAACCT CACCGTGAACCAGGCGCTCTACAAGAAGATGCCGTTCGACGTCGCCCGTGACCTCACACCGGTGACGCTCATGGCCAAGG TGCCGCTGGTGCTGGTGGTTTCCGCCAAGGGTCCCTACCGCAGCGTGGCGGACCTGGCGGGTGCAGCCAGGCGCAAAGCG GTGACCTTCGCGTCGTCGGGTAACGGCACCCTGGCGCATCTCTGTGGAGAGCTCTGGAAGGGCAAGGCCGGCCTGGACCT GGTGCATGTGCCATACCGCGGCGCCGCGCCGGCCATGACCGATCTGGCAAGCGGGCAGGTGGACATGTTCGCCGCGTCGA TCACCGCAGCGCTGCCGATGATCCAGGCAGGCCTGCTGCGACCGCTGGCGGTCGCGTCCCCCATGCGGGTGGCAGCGCTC CCGAACATTCCGACCATGGCCGAATCCGGCTTCCAGGGCATCGAGGCGGCCGTGATCTTCGGCGTGGTGGCGCCCGCGGG CACGCCCGACACCGTGGTCTCCAGGCTCAACCAGGAGATCAACCGCGCGCTCAAGCAGCCGCAGTTGCGGCAATCACTGA TCGACCAGGGGGCAATTCCTGAATCCTTGGGCGGCACCGTGCCCGCGTTTGCCAGCTTGCTCAAGGACGAGCGGGCGAAG TGGGGGCAGGTGGTGAACGACTCGGGTGCTTCGGTGGATTGA
Upstream 100 bases:
>100_bases TGGAGGGGCGCATAGCCTCCCCACACCTGCTGATCGAGATCTCCGCCATCGCCGCCACGTCGGCGTCCATCCACCCCTAA GATTGAAACGAGGCCTCCCC
Downstream 100 bases:
>100_bases GACGGTAAGATCTTCGCTATCTGCGCGGAGGTCCGGGGTTGCAGTGATAGAAAACGCTGATGCGGTTCAAGTTTTGCGAC ATCGAATTATGCGAAGGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 333; Mature: 332
Protein sequence:
>333_residues MTEISHNAPIPRRACLRWTAGAGMAWLAGGSRAADYPSKPIRLVVPAPPGGGTDMMSRLLSNALNSTLGWTVVVDNVPGA GGNIGLDKAAKSAPDGYTLAMGESSNLTVNQALYKKMPFDVARDLTPVTLMAKVPLVLVVSAKGPYRSVADLAGAARRKA VTFASSGNGTLAHLCGELWKGKAGLDLVHVPYRGAAPAMTDLASGQVDMFAASITAALPMIQAGLLRPLAVASPMRVAAL PNIPTMAESGFQGIEAAVIFGVVAPAGTPDTVVSRLNQEINRALKQPQLRQSLIDQGAIPESLGGTVPAFASLLKDERAK WGQVVNDSGASVD
Sequences:
>Translated_333_residues MTEISHNAPIPRRACLRWTAGAGMAWLAGGSRAADYPSKPIRLVVPAPPGGGTDMMSRLLSNALNSTLGWTVVVDNVPGA GGNIGLDKAAKSAPDGYTLAMGESSNLTVNQALYKKMPFDVARDLTPVTLMAKVPLVLVVSAKGPYRSVADLAGAARRKA VTFASSGNGTLAHLCGELWKGKAGLDLVHVPYRGAAPAMTDLASGQVDMFAASITAALPMIQAGLLRPLAVASPMRVAAL PNIPTMAESGFQGIEAAVIFGVVAPAGTPDTVVSRLNQEINRALKQPQLRQSLIDQGAIPESLGGTVPAFASLLKDERAK WGQVVNDSGASVD >Mature_332_residues TEISHNAPIPRRACLRWTAGAGMAWLAGGSRAADYPSKPIRLVVPAPPGGGTDMMSRLLSNALNSTLGWTVVVDNVPGAG GNIGLDKAAKSAPDGYTLAMGESSNLTVNQALYKKMPFDVARDLTPVTLMAKVPLVLVVSAKGPYRSVADLAGAARRKAV TFASSGNGTLAHLCGELWKGKAGLDLVHVPYRGAAPAMTDLASGQVDMFAASITAALPMIQAGLLRPLAVASPMRVAALP NIPTMAESGFQGIEAAVIFGVVAPAGTPDTVVSRLNQEINRALKQPQLRQSLIDQGAIPESLGGTVPAFASLLKDERAKW GQVVNDSGASVD
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 34424; Mature: 34293
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEISHNAPIPRRACLRWTAGAGMAWLAGGSRAADYPSKPIRLVVPAPPGGGTDMMSRLL CCCCCCCCCCCHHHHHEECCCCCEEEECCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHH SNALNSTLGWTVVVDNVPGAGGNIGLDKAAKSAPDGYTLAMGESSNLTVNQALYKKMPFD HHHHHCCCCEEEEEECCCCCCCCCCHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHCCHH VARDLTPVTLMAKVPLVLVVSAKGPYRSVADLAGAARRKAVTFASSGNGTLAHLCGELWK HHHCCCCHHHEECCCEEEEEECCCCHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHC GKAGLDLVHVPYRGAAPAMTDLASGQVDMFAASITAALPMIQAGLLRPLAVASPMRVAAL CCCCCEEEECCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEC PNIPTMAESGFQGIEAAVIFGVVAPAGTPDTVVSRLNQEINRALKQPQLRQSLIDQGAIP CCCCHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCC ESLGGTVPAFASLLKDERAKWGQVVNDSGASVD HHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure TEISHNAPIPRRACLRWTAGAGMAWLAGGSRAADYPSKPIRLVVPAPPGGGTDMMSRLL CCCCCCCCCCHHHHHEECCCCCEEEECCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHH SNALNSTLGWTVVVDNVPGAGGNIGLDKAAKSAPDGYTLAMGESSNLTVNQALYKKMPFD HHHHHCCCCEEEEEECCCCCCCCCCHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHCCHH VARDLTPVTLMAKVPLVLVVSAKGPYRSVADLAGAARRKAVTFASSGNGTLAHLCGELWK HHHCCCCHHHEECCCEEEEEECCCCHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHC GKAGLDLVHVPYRGAAPAMTDLASGQVDMFAASITAALPMIQAGLLRPLAVASPMRVAAL CCCCCEEEECCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEC PNIPTMAESGFQGIEAAVIFGVVAPAGTPDTVVSRLNQEINRALKQPQLRQSLIDQGAIP CCCCHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCC ESLGGTVPAFASLLKDERAKWGQVVNDSGASVD HHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3299368 [H]