Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120609225
Identifier: 120609225
GI number: 120609225
Start: 566539
End: 567294
Strand: Direct
Name: 120609225
Synonym: Aave_0524
Alternate gene names: NA
Gene position: 566539-567294 (Clockwise)
Preceding gene: 120609220
Following gene: 120609234
Centisome position: 10.58
GC content: 50.13
Gene sequence:
>756_bases GTGTCGCCTGCCACGGCGGAGTGGCTACTCGATGAGTTTGAATACGATGACTTCATCGAACTTCAGAACTGGGGAGCTCG GAAAGGCGTAAGGCTTGCAACTGTATCCCTCTCCGAGCGTGGCGCGGCAGTAAAAAACTCTGAGATTTCGAAAGAGGCAT TGCGGTTAGGTCTACTGACCGAGCTTATTCGACTGCGGGAAGTCACTGTTATGCCAACCGAGGGAGATTGGTTCATGCCC GCTGAAGAACTGAGTTCTGGCGAATACCATATGCTCTCAACAATGCTCGCTGTTGGCTTCGCTCTGGAACCTAAAGCAGT TCTGCTTATGGATGAGCCAGAGAATAACTTGCACCCCCAATGGCAACGTGATCTTATGTCGGCCATTTTTGATGTGTGTG ATAAAGTGCGGCTGGATGGACACGTAATTATATCGACTCATTCTCCACTGATTGTTGGATCGGTTCCAGAATCGAGTTCC GTGGTGGACATGTCTTCCGAGCCAACCCGGCTCAGTCTGGTTTCATACGGGGCATCATCTGATGAACTACTTTTGTCGCA GTTTGGCGTTGGATCGAGCCGAAATGCGATAGTGGTTGAAACAATTCAGCGGGCCATATCGATGGTAGAGAACGGAAGTT ATGGCGGGGAAGATTTTTTGGGGTTGGTGCCAGATCTTAAAAAGATACGCGCGGCGCTTACGGACAATGACCCGTTGATA AGCGTGATTGACGCTTTGATTGATGACGGGGAGTGA
Upstream 100 bases:
>100_bases CAAGCATAACGGCTCTGCGCAGGTCTCAGTCGGTGGTGTTAGCCGCTCTAAGAGCCGGGAGAGGGGTGAGGTGCGCAATT CAAAGCGGTCGCTTCCTCAT
Downstream 100 bases:
>100_bases CTTATGCACATTGGATTTGAATACATTGATCCTGTACCAACTCGCCCCGCTGGAGCGACGCCATCAGCACTGTATAGATA TAAATGGACCTCTAGTGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: ATPase
Number of amino acids: Translated: 251; Mature: 250
Protein sequence:
>251_residues MSPATAEWLLDEFEYDDFIELQNWGARKGVRLATVSLSERGAAVKNSEISKEALRLGLLTELIRLREVTVMPTEGDWFMP AEELSSGEYHMLSTMLAVGFALEPKAVLLMDEPENNLHPQWQRDLMSAIFDVCDKVRLDGHVIISTHSPLIVGSVPESSS VVDMSSEPTRLSLVSYGASSDELLLSQFGVGSSRNAIVVETIQRAISMVENGSYGGEDFLGLVPDLKKIRAALTDNDPLI SVIDALIDDGE
Sequences:
>Translated_251_residues MSPATAEWLLDEFEYDDFIELQNWGARKGVRLATVSLSERGAAVKNSEISKEALRLGLLTELIRLREVTVMPTEGDWFMP AEELSSGEYHMLSTMLAVGFALEPKAVLLMDEPENNLHPQWQRDLMSAIFDVCDKVRLDGHVIISTHSPLIVGSVPESSS VVDMSSEPTRLSLVSYGASSDELLLSQFGVGSSRNAIVVETIQRAISMVENGSYGGEDFLGLVPDLKKIRAALTDNDPLI SVIDALIDDGE >Mature_250_residues SPATAEWLLDEFEYDDFIELQNWGARKGVRLATVSLSERGAAVKNSEISKEALRLGLLTELIRLREVTVMPTEGDWFMPA EELSSGEYHMLSTMLAVGFALEPKAVLLMDEPENNLHPQWQRDLMSAIFDVCDKVRLDGHVIISTHSPLIVGSVPESSSV VDMSSEPTRLSLVSYGASSDELLLSQFGVGSSRNAIVVETIQRAISMVENGSYGGEDFLGLVPDLKKIRAALTDNDPLIS VIDALIDDGE
Specific function: Unknown
COG id: COG3950
COG function: function code R; Predicted ATP-binding protein involved in virulence
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27498; Mature: 27366
Theoretical pI: Translated: 4.13; Mature: 4.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPATAEWLLDEFEYDDFIELQNWGARKGVRLATVSLSERGAAVKNSEISKEALRLGLLT CCCCHHHHHHHHCCCCCEEHHCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHH ELIRLREVTVMPTEGDWFMPAEELSSGEYHMLSTMLAVGFALEPKAVLLMDEPENNLHPQ HHHHHHHEEEECCCCCCCCCHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCH WQRDLMSAIFDVCDKVRLDGHVIISTHSPLIVGSVPESSSVVDMSSEPTRLSLVSYGASS HHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEECCCCCCCEEECCCCCCEEEEEECCCCC DELLLSQFGVGSSRNAIVVETIQRAISMVENGSYGGEDFLGLVPDLKKIRAALTDNDPLI CHHHHHHCCCCCCCCEEHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHCCCCCHH SVIDALIDDGE HHHHHHHCCCC >Mature Secondary Structure SPATAEWLLDEFEYDDFIELQNWGARKGVRLATVSLSERGAAVKNSEISKEALRLGLLT CCCHHHHHHHHCCCCCEEHHCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHH ELIRLREVTVMPTEGDWFMPAEELSSGEYHMLSTMLAVGFALEPKAVLLMDEPENNLHPQ HHHHHHHEEEECCCCCCCCCHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCH WQRDLMSAIFDVCDKVRLDGHVIISTHSPLIVGSVPESSSVVDMSSEPTRLSLVSYGASS HHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEECCCCCCCEEECCCCCCEEEEEECCCCC DELLLSQFGVGSSRNAIVVETIQRAISMVENGSYGGEDFLGLVPDLKKIRAALTDNDPLI CHHHHHHCCCCCCCCEEHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHCCCCCHH SVIDALIDDGE HHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA