Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120609213
Identifier: 120609213
GI number: 120609213
Start: 554462
End: 555766
Strand: Direct
Name: 120609213
Synonym: Aave_0511
Alternate gene names: NA
Gene position: 554462-555766 (Clockwise)
Preceding gene: 120609202
Following gene: 120609214
Centisome position: 10.36
GC content: 62.53
Gene sequence:
>1305_bases ATGAGACACACTTGGCTTTTCGTCACAGCCTGCGCAATGGCGCTGTCCAGTACCGCCCAGGCCCAGGATGCCAAAGCGTT GGAACAGTTGGAGGTCATCTCTCGCAGCTACGCGAAGGACAATCACGTGGCTGAAGCGGAAGCCTCGCGGCGCCTGGAGC TCCGTCAGGTGCTTGCGCGGCCGGAGATCGAGGCTTTCAAAGCGGACTATGCAGACCGTCTCGATACCGCGTATTGGGAC GATAGCCGCGACGGGTTCAAGCTCGTGCTGCGACTCAAGCAGGGTCCGCTACCCGCTATCCATGAGTTGTCCACGACGCA CGGAACCATCCCGGTCAAGTTCACTCTGGTGTCCGGCAAGACGCTGGACGAGATCAGCGCCGTCCTGGCGGCGAACCAAG CACTCCTGCAGGAGCAGGTGCCCGGCTTGCAGGGCACGGGTATCGATGAAGTGGATGCTGCGATCGTGCTTTACGTCTTC GTCCCTGCGGAGGAGCAAGCTGCCTACGAAGCGGAGAACGCAGCGCTGAGTCGCCAGCTCGGCGTGCCTGTCAGGTTCAA GTTCCTGCCGGGCCCCATGGAATCCGAGCCACAAGAGTCGCCCGAGCAATCGTCCAGCTCAACGCTGCCGACACAGAGTG CGCCAATGGCAACGACCGAGTCGCCCTATGTGCGGGGCGGCTCGCAGATACTCAATCTGGACAATGGGCACCAGTGCACC GGCGGCTTCATCGTGCGGAACAAGGACAACACCAAGTGGGGCCTGGTCACCGCGGCGCACTGTGGCAAGAACCTCATGTA CGGCAACTGGTCGGATGCGGCGAGCGGCGCGCAGGTCACTGCGAAGCTGACTTACGAGGACCAGCTATTCGATGCGACGC ACGACTTGGCATGGCATTCCTTCCCTGTCCTGGGCTACCGCCCACTCGGAGAAGTCTTCGCGAGGGACACCTGTTCCAGT TGCGGCGTGGTGATCCTCTCCACCGCAGCCGCCGTACCTGGGGATCGGGTATGCCACAGGGGCTTGCTGACCGGGTGGAC ATGCGGCGTCGTGTCGAGCAGCACGGCGAGCTTTGGCAGCAAGGATTGCAACGGACAGGTCTGTGACCCCCGGGCCTACA AGGTGGTCGTAGGGGACGACCTGGCGTGCTTCAGTGGTGACAGTGGCGGGCCGGTTCACTACGGAAATATTGCGTACGGT CTCGTCAAGAGCGCTTCCTTTGCGGGCGTCGAACCGGGCCGGTGCGGCGCGCTGGTTTTCAGCCCCATTGGCAAGATCGT GGACTTGGGCCTACGGCTGTACTGA
Upstream 100 bases:
>100_bases ACGCTGGAATGCTGGAACGGTGTCGTTTGACACGGGCATCAGCGAAAAGAAAAATAGATGGAACTGCCCTTCAGGAACAA CATTCAAGGAGGACCAAACG
Downstream 100 bases:
>100_bases TTCCAGTACGCTGCAACCACGGCCATGGCCGGAAAAGCGTCTACTCGGCGATCGGCGCCGCCTGGCCCCAGCCCGGGCGC CGCGCTGAGGTAGTATCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 434; Mature: 434
Protein sequence:
>434_residues MRHTWLFVTACAMALSSTAQAQDAKALEQLEVISRSYAKDNHVAEAEASRRLELRQVLARPEIEAFKADYADRLDTAYWD DSRDGFKLVLRLKQGPLPAIHELSTTHGTIPVKFTLVSGKTLDEISAVLAANQALLQEQVPGLQGTGIDEVDAAIVLYVF VPAEEQAAYEAENAALSRQLGVPVRFKFLPGPMESEPQESPEQSSSSTLPTQSAPMATTESPYVRGGSQILNLDNGHQCT GGFIVRNKDNTKWGLVTAAHCGKNLMYGNWSDAASGAQVTAKLTYEDQLFDATHDLAWHSFPVLGYRPLGEVFARDTCSS CGVVILSTAAAVPGDRVCHRGLLTGWTCGVVSSSTASFGSKDCNGQVCDPRAYKVVVGDDLACFSGDSGGPVHYGNIAYG LVKSASFAGVEPGRCGALVFSPIGKIVDLGLRLY
Sequences:
>Translated_434_residues MRHTWLFVTACAMALSSTAQAQDAKALEQLEVISRSYAKDNHVAEAEASRRLELRQVLARPEIEAFKADYADRLDTAYWD DSRDGFKLVLRLKQGPLPAIHELSTTHGTIPVKFTLVSGKTLDEISAVLAANQALLQEQVPGLQGTGIDEVDAAIVLYVF VPAEEQAAYEAENAALSRQLGVPVRFKFLPGPMESEPQESPEQSSSSTLPTQSAPMATTESPYVRGGSQILNLDNGHQCT GGFIVRNKDNTKWGLVTAAHCGKNLMYGNWSDAASGAQVTAKLTYEDQLFDATHDLAWHSFPVLGYRPLGEVFARDTCSS CGVVILSTAAAVPGDRVCHRGLLTGWTCGVVSSSTASFGSKDCNGQVCDPRAYKVVVGDDLACFSGDSGGPVHYGNIAYG LVKSASFAGVEPGRCGALVFSPIGKIVDLGLRLY >Mature_434_residues MRHTWLFVTACAMALSSTAQAQDAKALEQLEVISRSYAKDNHVAEAEASRRLELRQVLARPEIEAFKADYADRLDTAYWD DSRDGFKLVLRLKQGPLPAIHELSTTHGTIPVKFTLVSGKTLDEISAVLAANQALLQEQVPGLQGTGIDEVDAAIVLYVF VPAEEQAAYEAENAALSRQLGVPVRFKFLPGPMESEPQESPEQSSSSTLPTQSAPMATTESPYVRGGSQILNLDNGHQCT GGFIVRNKDNTKWGLVTAAHCGKNLMYGNWSDAASGAQVTAKLTYEDQLFDATHDLAWHSFPVLGYRPLGEVFARDTCSS CGVVILSTAAAVPGDRVCHRGLLTGWTCGVVSSSTASFGSKDCNGQVCDPRAYKVVVGDDLACFSGDSGGPVHYGNIAYG LVKSASFAGVEPGRCGALVFSPIGKIVDLGLRLY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46467; Mature: 46467
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: PS00134 TRYPSIN_HIS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHTWLFVTACAMALSSTAQAQDAKALEQLEVISRSYAKDNHVAEAEASRRLELRQVLAR CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC PEIEAFKADYADRLDTAYWDDSRDGFKLVLRLKQGPLPAIHELSTTHGTIPVKFTLVSGK CCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCHHHHHCCCCCCEEEEEEEECCC TLDEISAVLAANQALLQEQVPGLQGTGIDEVDAAIVLYVFVPAEEQAAYEAENAALSRQL CHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCEEEEEEEECCCHHHHHHHHHHHHHHHC GVPVRFKFLPGPMESEPQESPEQSSSSTLPTQSAPMATTESPYVRGGSQILNLDNGHQCT CCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCC GGFIVRNKDNTKWGLVTAAHCGKNLMYGNWSDAASGAQVTAKLTYEDQLFDATHDLAWHS CEEEEECCCCCCEEEEEHHHCCCCCCCCCCCCCCCCCEEEEEEEECHHHHHHHHHHHHCC FPVLGYRPLGEVFARDTCSSCGVVILSTAAAVPGDRVCHRGLLTGWTCGVVSSSTASFGS CCCCCCCCHHHHHHHHHHCCCCEEEEEHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCCCC KDCNGQVCDPRAYKVVVGDDLACFSGDSGGPVHYGNIAYGLVKSASFAGVEPGRCGALVF CCCCCCCCCCCEEEEEECCCEEEECCCCCCCEEECCHHHHHHHCCCCCCCCCCCCCCHHH SPIGKIVDLGLRLY HHHHHHHHHHHCCC >Mature Secondary Structure MRHTWLFVTACAMALSSTAQAQDAKALEQLEVISRSYAKDNHVAEAEASRRLELRQVLAR CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC PEIEAFKADYADRLDTAYWDDSRDGFKLVLRLKQGPLPAIHELSTTHGTIPVKFTLVSGK CCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCHHHHHCCCCCCEEEEEEEECCC TLDEISAVLAANQALLQEQVPGLQGTGIDEVDAAIVLYVFVPAEEQAAYEAENAALSRQL CHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCEEEEEEEECCCHHHHHHHHHHHHHHHC GVPVRFKFLPGPMESEPQESPEQSSSSTLPTQSAPMATTESPYVRGGSQILNLDNGHQCT CCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCC GGFIVRNKDNTKWGLVTAAHCGKNLMYGNWSDAASGAQVTAKLTYEDQLFDATHDLAWHS CEEEEECCCCCCEEEEEHHHCCCCCCCCCCCCCCCCCEEEEEEEECHHHHHHHHHHHHCC FPVLGYRPLGEVFARDTCSSCGVVILSTAAAVPGDRVCHRGLLTGWTCGVVSSSTASFGS CCCCCCCCHHHHHHHHHHCCCCEEEEEHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCCCC KDCNGQVCDPRAYKVVVGDDLACFSGDSGGPVHYGNIAYGLVKSASFAGVEPGRCGALVF CCCCCCCCCCCEEEEEECCCEEEECCCCCCCEEECCHHHHHHHCCCCCCCCCCCCCCHHH SPIGKIVDLGLRLY HHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA