| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120609032
Identifier: 120609032
GI number: 120609032
Start: 361613
End: 362731
Strand: Direct
Name: 120609032
Synonym: Aave_0329
Alternate gene names: NA
Gene position: 361613-362731 (Clockwise)
Preceding gene: 120609031
Following gene: 120609033
Centisome position: 6.76
GC content: 72.21
Gene sequence:
>1119_bases GTGCACAAGACCTCCGCCTGGCCGCTCGCGCTGACCTACATCGCGCTCATCGTCTTCGCGAGCCTGTTTCCCTTCGAGGG CTGGCGCGAGCAGGGCATCTCCCCGCTGGTCTTTCTCACGGCCCGGGTTCCGCCGCCTTACTGGACCTGGTTCGACGTCA ACATCAACATCGCCGGCTATGCACCGCTGGGCTTCCTGCTGGCCCTGGCGCTGCTGCGCACCGGCTGGCCCCGGGCCGCC GTGGCGGTGGCGGTGCTGTCCGGCGGCATGCTCTCCATGCTCATGGAGCTTCTGCAGATCTACCTGCCGCGCCGGGTGCC GTCCAACACGGACCTGCTGCTCAACACGGCCGGCACCTTGCTGGGAGCGCTCCTGGCCGCATTGCTGGAGCGGCTGGGGG CCATCGCCCGCTGGAGCCGGTTCCGCGCGCGCTGGTTCGTGCAGGACGCGAGCGGCGCCCTGGTGCTCATCGCGCTCTGG CCGGCCGCGCTGCTGTTTCCCGCGGCCGTGCCTTTCGGGCTCGGCCAGATGTGGGAGCGCCTGGAATCCGCGCTGGCCGA GATCCTCGCCGACACCCCGTTCCTCGAATGGCTGCCGGTGCGCGACGCGCCGCTGGAGCCCCTGATGCCCGGGGCGGAAC TGCTCGCGGTGCTGCTCGGGTTGCTCGTCCCCTGCCTGCTGGGCTACTGCGTGATCCGGAGCGTCGGCCGCCGCGTGGCC TATGCCTGCGGCATGGTCGCCGCCGGGGTGGCGGTGACCGCGCTGTCCGCCGCGCTCAGCTATGGCCCGGCCCACGCCTG GGAGTGGCTCGGCCTGCCCGCGCGCGTGGGGATCGTCGCGGGGCTGGTGGCGGCGCTGCTGCTCGTGGCACTGCCGCGCC GCGCCGCCGGGGTGCTGCTGCTGCTCGTGCTGGTCTGGCACCTGAACCTGCTCAACCAGGCGCCGACCAGCGCCTATTTC GCGGAAACCCTCCTGGCCTGGGAGCAGGGGCGCTTCATCCGCTTCTACGGCCTGGGCCAGTGGCTCGGCTGGCTCTGGCC CTATGCGACGCTGGTGTATGTGGTGCTGCAGGTCGCCAGCCGCCCGGCGCCGGAGGCACGCACGGCCCCCGCCTCCTAG
Upstream 100 bases:
>100_bases ACCGCTGGTACCGCTGGTTCAACGAGGTGCCCGTGCTGATGCTGGTGGCCGCGGTGGTACTGGTGGTCGTCAAGCCGTTC TGAGCCGGGCGCGCTCTGCC
Downstream 100 bases:
>100_bases AATCCGGGCATGACCGAAGACACTTCCCCGTCCCGCGGCTACTACGCCCGCCACATCTTCTTCTGCCTCAACGACCGCAT CAACGGCGAGGACAGCTGTG
Product: VanZ family protein
Products: NA
Alternate protein names: VanZ Like Protein; Vanz Family Protein
Number of amino acids: Translated: 372; Mature: 372
Protein sequence:
>372_residues MHKTSAWPLALTYIALIVFASLFPFEGWREQGISPLVFLTARVPPPYWTWFDVNINIAGYAPLGFLLALALLRTGWPRAA VAVAVLSGGMLSMLMELLQIYLPRRVPSNTDLLLNTAGTLLGALLAALLERLGAIARWSRFRARWFVQDASGALVLIALW PAALLFPAAVPFGLGQMWERLESALAEILADTPFLEWLPVRDAPLEPLMPGAELLAVLLGLLVPCLLGYCVIRSVGRRVA YACGMVAAGVAVTALSAALSYGPAHAWEWLGLPARVGIVAGLVAALLLVALPRRAAGVLLLLVLVWHLNLLNQAPTSAYF AETLLAWEQGRFIRFYGLGQWLGWLWPYATLVYVVLQVASRPAPEARTAPAS
Sequences:
>Translated_372_residues MHKTSAWPLALTYIALIVFASLFPFEGWREQGISPLVFLTARVPPPYWTWFDVNINIAGYAPLGFLLALALLRTGWPRAA VAVAVLSGGMLSMLMELLQIYLPRRVPSNTDLLLNTAGTLLGALLAALLERLGAIARWSRFRARWFVQDASGALVLIALW PAALLFPAAVPFGLGQMWERLESALAEILADTPFLEWLPVRDAPLEPLMPGAELLAVLLGLLVPCLLGYCVIRSVGRRVA YACGMVAAGVAVTALSAALSYGPAHAWEWLGLPARVGIVAGLVAALLLVALPRRAAGVLLLLVLVWHLNLLNQAPTSAYF AETLLAWEQGRFIRFYGLGQWLGWLWPYATLVYVVLQVASRPAPEARTAPAS >Mature_372_residues MHKTSAWPLALTYIALIVFASLFPFEGWREQGISPLVFLTARVPPPYWTWFDVNINIAGYAPLGFLLALALLRTGWPRAA VAVAVLSGGMLSMLMELLQIYLPRRVPSNTDLLLNTAGTLLGALLAALLERLGAIARWSRFRARWFVQDASGALVLIALW PAALLFPAAVPFGLGQMWERLESALAEILADTPFLEWLPVRDAPLEPLMPGAELLAVLLGLLVPCLLGYCVIRSVGRRVA YACGMVAAGVAVTALSAALSYGPAHAWEWLGLPARVGIVAGLVAALLLVALPRRAAGVLLLLVLVWHLNLLNQAPTSAYF AETLLAWEQGRFIRFYGLGQWLGWLWPYATLVYVVLQVASRPAPEARTAPAS
Specific function: Unknown
COG id: COG5652
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40390; Mature: 40390
Theoretical pI: Translated: 9.31; Mature: 9.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHKTSAWPLALTYIALIVFASLFPFEGWREQGISPLVFLTARVPPPYWTWFDVNINIAGY CCCCCCCHHHHHHHHHHHHHHHCCCCCHHHCCCCEEEEEEECCCCCCEEEEEEEEEEECC APLGFLLALALLRTGWPRAAVAVAVLSGGMLSMLMELLQIYLPRRVPSNTDLLLNTAGTL CHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH LGALLAALLERLGAIARWSRFRARWFVQDASGALVLIALWPAALLFPAAVPFGLGQMWER HHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEHHHHHHHHHHHHHHHHCCHHHHHHH LESALAEILADTPFLEWLPVRDAPLEPLMPGAELLAVLLGLLVPCLLGYCVIRSVGRRVA HHHHHHHHHHCCCCHHEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YACGMVAAGVAVTALSAALSYGPAHAWEWLGLPARVGIVAGLVAALLLVALPRRAAGVLL HHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHH LLVLVWHLNLLNQAPTSAYFAETLLAWEQGRFIRFYGLGQWLGWLWPYATLVYVVLQVAS HHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHC RPAPEARTAPAS CCCCCCCCCCCC >Mature Secondary Structure MHKTSAWPLALTYIALIVFASLFPFEGWREQGISPLVFLTARVPPPYWTWFDVNINIAGY CCCCCCCHHHHHHHHHHHHHHHCCCCCHHHCCCCEEEEEEECCCCCCEEEEEEEEEEECC APLGFLLALALLRTGWPRAAVAVAVLSGGMLSMLMELLQIYLPRRVPSNTDLLLNTAGTL CHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH LGALLAALLERLGAIARWSRFRARWFVQDASGALVLIALWPAALLFPAAVPFGLGQMWER HHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEHHHHHHHHHHHHHHHHCCHHHHHHH LESALAEILADTPFLEWLPVRDAPLEPLMPGAELLAVLLGLLVPCLLGYCVIRSVGRRVA HHHHHHHHHHCCCCHHEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YACGMVAAGVAVTALSAALSYGPAHAWEWLGLPARVGIVAGLVAALLLVALPRRAAGVLL HHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHH LLVLVWHLNLLNQAPTSAYFAETLLAWEQGRFIRFYGLGQWLGWLWPYATLVYVVLQVAS HHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHC RPAPEARTAPAS CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA