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The map label for this gene is 120609031

Identifier: 120609031

GI number: 120609031

Start: 361167

End: 361595

Strand: Direct

Name: 120609031

Synonym: Aave_0328

Alternate gene names: NA

Gene position: 361167-361595 (Clockwise)

Preceding gene: 120609024

Following gene: 120609032

Centisome position: 6.75

GC content: 68.07

Gene sequence:

>429_bases
ATGCTCTGGGTCAAAGCCTTCCATATCGTCTTCGTGGCCAGCTGGTTCGCGGGCCTGTTCTACCTGCCACGCATCTTCGT
GAACCTCGCCATGGTGCCTCCGGATTCCACCGCCGAGCGGGAGCGCCTGCTGCTCATGGCCCGCAAGCTGCTGCGCTTCA
CCACGCTGCTGGCGGTGCCCGCGCTGACCCTGGGCCTGTGGCTCTACCTGGGCTACGGCATCGGCCGCGGCCCCGGCAAC
GGCTGGATGCACGCCAAGCTCGCCGTGGTGGTGCTGGCCGTGGGCTACCACCATGCCTGCGGCGTCCTGCTGCGCAAGTT
CGCCGCCGGGCGCAACAGCCACGGCCACCGCTGGTACCGCTGGTTCAACGAGGTGCCCGTGCTGATGCTGGTGGCCGCGG
TGGTACTGGTGGTCGTCAAGCCGTTCTGA

Upstream 100 bases:

>100_bases
GAAAGGGCGGGGGGCTGGAGAGATGCATCCCGAAATTGTGCTCCCGTTTCGGGACGTGCGTGCCACCGGCGGGCTCCCCG
CGGCACGTACACTGCGGTCC

Downstream 100 bases:

>100_bases
GCCGGGCGCGCTCTGCCGTGCACAAGACCTCCGCCTGGCCGCTCGCGCTGACCTACATCGCGCTCATCGTCTTCGCGAGC
CTGTTTCCCTTCGAGGGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MLWVKAFHIVFVASWFAGLFYLPRIFVNLAMVPPDSTAERERLLLMARKLLRFTTLLAVPALTLGLWLYLGYGIGRGPGN
GWMHAKLAVVVLAVGYHHACGVLLRKFAAGRNSHGHRWYRWFNEVPVLMLVAAVVLVVVKPF

Sequences:

>Translated_142_residues
MLWVKAFHIVFVASWFAGLFYLPRIFVNLAMVPPDSTAERERLLLMARKLLRFTTLLAVPALTLGLWLYLGYGIGRGPGN
GWMHAKLAVVVLAVGYHHACGVLLRKFAAGRNSHGHRWYRWFNEVPVLMLVAAVVLVVVKPF
>Mature_142_residues
MLWVKAFHIVFVASWFAGLFYLPRIFVNLAMVPPDSTAERERLLLMARKLLRFTTLLAVPALTLGLWLYLGYGIGRGPGN
GWMHAKLAVVVLAVGYHHACGVLLRKFAAGRNSHGHRWYRWFNEVPVLMLVAAVVLVVVKPF

Specific function: Unknown

COG id: COG1981

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0093 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014351
- InterPro:   IPR008457
- InterPro:   IPR005265 [H]

Pfam domain/function: PF05425 CopD; PF03653 UPF0093 [H]

EC number: NA

Molecular weight: Translated: 16013; Mature: 16013

Theoretical pI: Translated: 11.28; Mature: 11.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLWVKAFHIVFVASWFAGLFYLPRIFVNLAMVPPDSTAERERLLLMARKLLRFTTLLAVP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ALTLGLWLYLGYGIGRGPGNGWMHAKLAVVVLAVGYHHACGVLLRKFAAGRNSHGHRWYR
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
WFNEVPVLMLVAAVVLVVVKPF
HHHCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLWVKAFHIVFVASWFAGLFYLPRIFVNLAMVPPDSTAERERLLLMARKLLRFTTLLAVP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ALTLGLWLYLGYGIGRGPGNGWMHAKLAVVVLAVGYHHACGVLLRKFAAGRNSHGHRWYR
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
WFNEVPVLMLVAAVVLVVVKPF
HHHCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9252185 [H]